##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545248_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3271258 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.265791019846187 31.0 31.0 33.0 30.0 34.0 2 31.52771685999698 31.0 31.0 34.0 30.0 34.0 3 31.62213313654869 31.0 31.0 34.0 30.0 34.0 4 35.3741902962102 37.0 35.0 37.0 33.0 37.0 5 35.235319867769526 37.0 35.0 37.0 32.0 37.0 6 35.22676933461072 37.0 35.0 37.0 32.0 37.0 7 35.86114057649993 37.0 35.0 37.0 35.0 37.0 8 35.94558545978336 37.0 35.0 37.0 35.0 37.0 9 37.56515352809225 39.0 37.0 39.0 35.0 39.0 10 36.81640274169754 39.0 37.0 39.0 32.0 39.0 11 36.49023678352487 39.0 35.0 39.0 32.0 39.0 12 35.564557121449916 37.0 35.0 39.0 31.0 39.0 13 35.134542735547 37.0 35.0 39.0 30.0 39.0 14 35.920414715072916 38.0 35.0 40.0 29.0 41.0 15 36.35061068249585 38.0 35.0 40.0 31.0 41.0 16 36.2715704478216 38.0 35.0 40.0 31.0 41.0 17 36.35509030470846 38.0 35.0 40.0 31.0 41.0 18 36.43299152802989 37.0 35.0 40.0 31.0 41.0 19 36.368588475748474 37.0 35.0 40.0 31.0 41.0 20 36.249313872522436 37.0 35.0 40.0 31.0 41.0 21 36.11748752314859 37.0 34.0 40.0 31.0 41.0 22 36.00363040762912 37.0 34.0 40.0 30.0 41.0 23 35.94969366525049 37.0 34.0 40.0 30.0 41.0 24 35.75305677509998 36.0 34.0 40.0 30.0 41.0 25 35.72212891798812 36.0 34.0 40.0 30.0 41.0 26 35.58821193559175 36.0 34.0 40.0 30.0 41.0 27 35.55395447256071 36.0 34.0 40.0 30.0 41.0 28 35.612715658624296 36.0 34.0 40.0 30.0 41.0 29 35.6219903780136 36.0 34.0 40.0 30.0 41.0 30 35.53418348537474 36.0 34.0 40.0 30.0 41.0 31 35.40331364875531 36.0 34.0 40.0 29.0 41.0 32 35.26362640916736 36.0 34.0 40.0 29.0 41.0 33 35.09460886301233 36.0 34.0 40.0 28.0 41.0 34 34.94082398881409 36.0 34.0 40.0 27.0 41.0 35 34.78603521947826 35.0 34.0 40.0 27.0 41.0 36 34.573008610143255 35.0 33.0 40.0 25.0 41.0 37 34.388061718152464 35.0 33.0 40.0 25.0 41.0 38 34.45204046883492 35.0 33.0 40.0 26.0 41.0 39 34.46494406738937 35.0 33.0 40.0 26.0 41.0 40 34.28694710108466 35.0 33.0 40.0 24.0 41.0 41 34.31827174744395 35.0 33.0 40.0 25.0 41.0 42 34.24303861083412 35.0 33.0 40.0 25.0 41.0 43 34.13403436842952 35.0 33.0 40.0 24.0 41.0 44 34.09124685365691 35.0 33.0 40.0 24.0 41.0 45 34.04384398907087 35.0 33.0 39.0 24.0 41.0 46 33.985228007084736 35.0 33.0 39.0 24.0 41.0 47 33.99625893157923 35.0 33.0 39.0 24.0 41.0 48 33.95093477799672 35.0 33.0 39.0 24.0 41.0 49 33.93481131723637 35.0 33.0 39.0 24.0 41.0 50 33.73951397291195 35.0 33.0 39.0 24.0 41.0 51 33.56237264073943 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 7.0 13 6.0 14 39.0 15 89.0 16 270.0 17 650.0 18 1635.0 19 3211.0 20 5615.0 21 9211.0 22 13658.0 23 19793.0 24 28407.0 25 39044.0 26 51543.0 27 62192.0 28 71062.0 29 82672.0 30 100836.0 31 124588.0 32 158219.0 33 207232.0 34 343885.0 35 501185.0 36 239020.0 37 279462.0 38 378953.0 39 548334.0 40 439.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.12594115169149 24.934505318748933 28.371317701018995 13.568235828540578 2 31.13930481790186 26.50347358722546 29.714531840655795 12.64268975421688 3 29.818100559478957 25.379991428374037 30.768805150801313 14.033102861345698 4 26.112400795045822 28.8408312643026 30.160690474429103 14.886077466222474 5 23.0293972532891 33.63079280203518 28.92352116525202 14.416288779423695 6 21.57185400845791 41.61111719100114 26.749647994746972 10.067380805793979 7 86.73042603182017 5.309486442218865 6.187925256888939 1.7721622690720207 8 88.41543528514106 3.907701563129536 6.098846376531597 1.5780167751977985 9 83.48827882117521 5.874926404459691 7.526462296767787 3.1103324775973036 10 51.79716793967336 23.722953065762468 13.465217356747772 11.0146616378164 11 45.84713281557126 20.588623703786126 19.68010471812373 13.884138762518884 12 41.14863456199419 21.321185916855228 24.524938112493725 13.005241408656854 13 20.678161123335425 41.1370793743569 24.019566784399153 14.165192717908523 14 15.048339201616015 42.88221840038297 26.849028722283595 15.220413675717415 15 14.394554021724975 23.406988993225237 47.63827860719026 14.560178377859526 16 16.198752895674996 18.917584611180164 45.15690905455944 19.7267534385854 17 16.03652172956092 19.09500870918772 29.210719545813873 35.657750015437486 18 19.844536872359196 23.347715160345043 37.05146460474838 19.756283362547375 19 30.82401326951283 23.39470014288081 26.544650406663123 19.236636180943233 20 31.970116695167427 22.009850644614396 26.137009065014134 19.883023595204047 21 21.769148138116893 30.209754167968413 27.913573310328932 20.107524383585766 22 21.764960146830365 24.822438340234857 23.42967139858733 29.982930114347443 23 19.285913859438786 31.265769927043358 24.877004504077636 24.57131170944022 24 17.713124431029286 23.896372588160272 41.557376397703884 16.833126583106562 25 16.865927419971154 25.79863771062998 37.74566237209049 19.589772497308374 26 15.700259655459764 35.634303378088795 27.896607360226554 20.768829606224884 27 16.174175194986148 37.18147575030768 27.842438597016805 18.801910457689367 28 14.608141577338138 30.18869193441789 37.5174321316142 17.685734356629773 29 15.23704336374569 25.933111970990975 36.53634167650488 22.293502988758455 30 17.599223295747386 33.98634409147795 30.416127373628125 17.998305239146532 31 30.187713717475052 28.36129097735489 24.330884326457895 17.120110978712166 32 31.416659890476385 25.46540199519573 26.33164366735977 16.786294446968107 33 29.691666019616918 26.800729260730886 23.59945317672895 19.908151542923243 34 19.21104969403208 26.519033350472508 26.72834120696075 27.54157574853466 35 20.182969365302277 25.64985702747995 32.43415835742702 21.733015249790753 36 32.238606676697465 26.698902990837166 23.685903099052414 17.37658723341296 37 19.519035184629278 37.48371421636569 26.17577091137416 16.821479687630873 38 19.58521767466828 36.762493205977634 24.321346711265207 19.330942408088873 39 20.74036960704414 34.87698004865407 25.219777834704573 19.162872509597225 40 26.035885888548076 25.292624427666667 26.260967493239605 22.410522190545656 41 16.848258376441112 25.131432617054354 27.296532404353307 30.72377660215122 42 19.104485185821478 25.075704820591955 25.9851103153588 29.834699678227768 43 19.205975193641102 25.235887844981963 27.62016936603594 27.937967595340996 44 17.440477027492175 29.43332503886884 31.381505219093082 21.744692714545902 45 16.643199649798333 40.05593566756275 22.424186658465945 20.87667802417296 46 19.535084056347742 36.29527233865382 25.24673993919159 18.922903665806853 47 20.847820624359194 28.08683998632942 26.15088751789067 24.91445187142072 48 20.732482732942493 25.674526436007188 33.73815211151184 19.854838719538478 49 20.315701176733842 26.53972875266946 34.018533542753275 19.126036527843418 50 18.825418233596984 36.342257321189585 26.367440293611814 18.464884151601616 51 17.63691521732618 34.760541663176674 26.286767965107 21.315775154390145 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 8312.0 1 7927.0 2 7542.0 3 16402.0 4 25262.0 5 18396.0 6 11530.0 7 11678.5 8 11827.0 9 12470.5 10 13114.0 11 13893.5 12 14673.0 13 14866.5 14 15060.0 15 14243.0 16 13426.0 17 12666.0 18 11906.0 19 11551.5 20 11197.0 21 11680.5 22 12164.0 23 13707.0 24 15250.0 25 17855.5 26 26255.5 27 32050.0 28 40483.0 29 48916.0 30 54734.5 31 60553.0 32 71267.0 33 81981.0 34 90406.5 35 98832.0 36 105770.0 37 112708.0 38 134075.5 39 155443.0 40 206031.0 41 256619.0 42 305405.0 43 354191.0 44 358539.0 45 362887.0 46 336523.5 47 310160.0 48 273622.5 49 237085.0 50 211390.0 51 185695.0 52 166940.5 53 148186.0 54 133862.5 55 119539.0 56 110276.5 57 101014.0 58 97990.0 59 94966.0 60 90795.0 61 86624.0 62 76935.0 63 67246.0 64 59484.5 65 51723.0 66 42979.5 67 34236.0 68 30092.5 69 25949.0 70 23465.0 71 20981.0 72 17112.0 73 13243.0 74 11264.0 75 7259.5 76 5234.0 77 3959.0 78 2684.0 79 1774.5 80 865.0 81 678.5 82 492.0 83 278.5 84 65.0 85 61.0 86 57.0 87 33.0 88 9.0 89 7.0 90 5.0 91 6.5 92 8.0 93 4.0 94 0.0 95 0.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3271258.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.621295524278974 #Duplication Level Percentage of deduplicated Percentage of total 1 78.88236108988254 12.3224467423794 2 8.01899066079074 2.5053404583729058 3 2.9243170233698974 1.3704486128622297 4 1.5324456413608676 0.9575514495436538 5 0.9469331967539839 0.7396161654122096 6 0.6446299847120867 0.6041973296999366 7 0.44656511887565087 0.48831479849539206 8 0.3374689103729235 0.4217361263353482 9 0.2754351670756396 0.38723887284009484 >10 3.1994657888680043 12.272865362059566 >50 1.3668913704122068 15.527588200047063 >100 1.3776816307034785 45.8359135979641 >500 0.03951866355103861 4.0529634397789245 >1k 0.006485114018631978 1.4629519189178808 >5k 6.079794392467479E-4 0.6076136889439936 >10k+ 2.0265981308224931E-4 0.4432132363474136 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14000 0.42796991249238064 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7105 0.21719473058988314 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6904 0.21105030541767114 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5184 0.1584711447400358 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3936 0.12032068396928644 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.0569279463741473E-5 0.0 0.0 0.027909752150395963 0.0 2 3.0569279463741473E-5 0.0 0.0 0.09458135066081612 0.0 3 3.0569279463741473E-5 0.0 0.0 0.1312644860173059 0.0 4 3.0569279463741473E-5 0.0 0.0 0.1822846134422904 0.0 5 3.0569279463741473E-5 0.0 0.0 0.32238362122461756 0.0 6 3.0569279463741473E-5 0.0 0.0 0.45404550787495207 0.0 7 3.0569279463741473E-5 0.0 0.0 0.5483517350205945 0.0 8 3.0569279463741473E-5 0.0 0.0 0.777804746675438 0.0 9 3.0569279463741473E-5 0.0 0.0 0.8803952485557544 0.0 10 3.0569279463741473E-5 0.0 0.0 1.060417735317728 0.0 11 3.0569279463741473E-5 0.0 0.0 1.2316668388736076 0.0 12 3.0569279463741473E-5 0.0 0.0 1.390321399290426 0.0 13 3.0569279463741473E-5 0.0 0.0 1.450848572628634 0.0 14 3.0569279463741473E-5 0.0 0.0 1.4727667460041367 0.0 15 3.0569279463741473E-5 0.0 0.0 1.513760149765014 0.0 16 3.0569279463741473E-5 0.0 0.0 1.596511189273362 0.0 17 3.0569279463741473E-5 0.0 0.0 1.7081807671544098 0.0 18 3.0569279463741473E-5 0.0 0.0 1.8912296125832937 0.0 19 3.0569279463741473E-5 0.0 0.0 1.9609887083195516 0.0 20 3.0569279463741473E-5 0.0 0.0 2.038634678157455 0.0 21 3.0569279463741473E-5 0.0 0.0 2.1402775323743954 0.0 22 3.0569279463741473E-5 0.0 0.0 2.248523350955504 0.0 23 3.0569279463741473E-5 0.0 0.0 2.3794515748987086 0.0 24 3.0569279463741473E-5 0.0 0.0 2.482286631014735 0.0 25 3.0569279463741473E-5 0.0 0.0 2.561430495546362 0.0 26 3.0569279463741473E-5 0.0 0.0 2.644150965775246 0.0 27 6.113855892748295E-5 0.0 0.0 2.7245176014854224 0.0 28 6.113855892748295E-5 0.0 0.0 2.8135353432838377 0.0 29 6.113855892748295E-5 0.0 0.0 2.912212977392795 0.0 30 9.170783839122441E-5 0.0 0.0 3.0452810508984616 3.0569279463741473E-5 31 9.170783839122441E-5 0.0 0.0 3.164531810086517 3.0569279463741473E-5 32 9.170783839122441E-5 0.0 0.0 3.2776687133818245 3.0569279463741473E-5 33 9.170783839122441E-5 0.0 0.0 3.3886963363941334 3.0569279463741473E-5 34 9.170783839122441E-5 0.0 0.0 3.50403422781083 3.0569279463741473E-5 35 9.170783839122441E-5 0.0 0.0 3.6664488096016883 3.0569279463741473E-5 36 1.222771178549659E-4 0.0 0.0 3.7928527801842593 3.0569279463741473E-5 37 1.5284639731870736E-4 0.0 0.0 3.9161692535409927 3.0569279463741473E-5 38 1.5284639731870736E-4 0.0 0.0 4.045385597834228 3.0569279463741473E-5 39 1.5284639731870736E-4 0.0 0.0 4.184047849481759 3.0569279463741473E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATGCGT 50 2.1827873E-11 45.000004 38 TCCGATT 35 1.2128476E-7 45.0 33 GACCGAC 35 1.2128476E-7 45.0 9 CATACGT 40 6.8212103E-9 45.0 27 GCGTATT 35 1.2128476E-7 45.0 9 TCTATCG 40 6.8212103E-9 45.0 1 CGTAAGG 460 0.0 43.043476 2 ACGTAAG 80 0.0 42.1875 1 ACGGGTA 360 0.0 41.875 5 ACTACGG 135 0.0 41.666668 2 CGGTCTA 200 0.0 41.625004 31 TATACGG 220 0.0 40.909092 2 ACGTATA 50 1.0822987E-9 40.500004 13 CTACGAA 510 0.0 40.14706 11 CGTACAT 515 0.0 39.757282 35 GCTACGA 515 0.0 39.757282 10 GGTATGC 1455 0.0 39.587627 8 TGCGTAG 205 0.0 39.512196 1 GCGTAAG 245 0.0 39.489796 1 CGCATCG 80 0.0 39.375 21 >>END_MODULE