##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545247_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1257924 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21322273841663 31.0 31.0 33.0 30.0 34.0 2 31.463229098101316 31.0 31.0 34.0 30.0 34.0 3 31.546231727830936 31.0 31.0 34.0 30.0 34.0 4 35.29670472937952 37.0 35.0 37.0 33.0 37.0 5 35.126585548888485 37.0 35.0 37.0 32.0 37.0 6 35.115249410934204 37.0 35.0 37.0 32.0 37.0 7 35.810805740251396 37.0 35.0 37.0 35.0 37.0 8 35.92703613254855 37.0 35.0 37.0 35.0 37.0 9 37.62740435829192 39.0 37.0 39.0 35.0 39.0 10 36.836534639612566 39.0 37.0 39.0 32.0 39.0 11 36.36566358539944 38.0 35.0 39.0 32.0 39.0 12 34.95613884463608 35.0 34.0 39.0 30.0 39.0 13 34.27234634206836 35.0 33.0 39.0 25.0 39.0 14 34.89459856080335 35.0 33.0 40.0 25.0 41.0 15 35.53377231056884 35.0 33.0 40.0 30.0 41.0 16 35.63050390961616 35.0 34.0 40.0 31.0 41.0 17 35.73434166134043 35.0 34.0 40.0 31.0 41.0 18 35.84169790861769 36.0 34.0 40.0 31.0 41.0 19 35.73931493476553 36.0 34.0 40.0 30.0 41.0 20 35.51935331546262 35.0 34.0 40.0 30.0 41.0 21 35.37189130662902 35.0 34.0 40.0 30.0 41.0 22 35.24547587930591 35.0 34.0 40.0 30.0 41.0 23 35.211434872059044 35.0 34.0 40.0 29.0 41.0 24 35.04970888543346 35.0 34.0 40.0 29.0 41.0 25 35.059703129918816 35.0 34.0 39.0 29.0 41.0 26 34.90179454402651 35.0 34.0 39.0 29.0 41.0 27 34.7996111052814 35.0 34.0 39.0 29.0 41.0 28 34.93297528308546 35.0 34.0 39.0 29.0 41.0 29 34.99947930081627 35.0 34.0 39.0 29.0 41.0 30 34.945977658427694 36.0 34.0 39.0 29.0 41.0 31 34.75582308629138 35.0 34.0 39.0 29.0 41.0 32 34.554672619331534 35.0 34.0 39.0 28.0 41.0 33 34.327346485161264 35.0 33.0 39.0 27.0 41.0 34 34.17879379040387 35.0 33.0 39.0 26.0 41.0 35 33.99887274588926 35.0 33.0 39.0 25.0 41.0 36 33.704967072732536 35.0 33.0 39.0 23.0 41.0 37 33.501314864809004 35.0 33.0 39.0 23.0 41.0 38 33.660524006219774 35.0 33.0 39.0 23.0 41.0 39 33.67535161106712 35.0 33.0 39.0 23.0 41.0 40 33.52065148609932 35.0 33.0 39.0 23.0 41.0 41 33.626587933770246 35.0 33.0 39.0 23.0 41.0 42 33.58426025737644 35.0 33.0 39.0 23.0 41.0 43 33.399234770940055 35.0 33.0 38.0 23.0 41.0 44 33.38897659954019 35.0 33.0 38.0 23.0 41.0 45 33.3206290682108 35.0 32.0 38.0 23.0 40.0 46 33.24989824504501 35.0 32.0 38.0 23.0 40.0 47 33.28018544840547 35.0 32.0 38.0 23.0 40.0 48 33.333422368918946 35.0 33.0 38.0 23.0 40.0 49 33.38464565426846 35.0 33.0 38.0 24.0 40.0 50 33.12961673360235 35.0 32.0 38.0 24.0 40.0 51 32.932619935703585 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 3.0 13 5.0 14 12.0 15 36.0 16 121.0 17 366.0 18 764.0 19 1589.0 20 2778.0 21 4369.0 22 6967.0 23 10089.0 24 14178.0 25 18994.0 26 23794.0 27 27572.0 28 31453.0 29 35875.0 30 42935.0 31 52709.0 32 66509.0 33 88549.0 34 156673.0 35 231010.0 36 75698.0 37 84658.0 38 114610.0 39 165444.0 40 163.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.447289343394353 23.902159430935413 30.252543078914147 14.398008146756084 2 28.242008261230406 27.57328741640989 30.880800429914686 13.303903892445012 3 25.58071870796646 26.9796903469526 33.50782718192832 13.931763763152624 4 24.062661973219367 28.638137121161535 32.688779290322785 14.610421615296312 5 22.937236271825643 33.00223224932508 30.329097783331903 13.731433695517376 6 20.807457366263783 40.64736820348447 27.78872173517637 10.756452695075378 7 86.72900747580935 5.122328534951237 6.483857530343645 1.6648064588957678 8 89.26978100425781 3.895068382509595 5.4491368317958795 1.3860137814367164 9 86.29257411417542 4.388738906325025 6.498325813006191 2.8203611664933654 10 62.21154855142282 18.665992540089864 11.076026850588748 8.04643205789857 11 56.47415901119622 16.430563372667983 16.93432989592376 10.160947720212032 12 49.21378398059024 20.38803616116713 20.44368340217692 9.954496456065707 13 20.34264391171486 50.560526709085764 19.01339031610813 10.083439063091252 14 11.758262025368783 51.53260451346823 24.917960067539852 11.791173393623144 15 9.286332083655292 21.694474387959843 56.760344822103725 12.258848706281142 16 11.128573745313709 15.506342195553943 54.00946321081401 19.355620848318342 17 11.399416816914218 16.60823706360639 29.18125419341709 42.8110919260623 18 18.39316206702472 21.15429866987195 39.73992069473196 20.71261856837138 19 31.524003039929283 22.041236195509427 25.360117145391932 21.07464361916936 20 34.709966579856975 20.094218728635436 25.568635307061477 19.62717938444612 21 19.218569643317085 32.013539768698266 28.351315341785355 20.416575246199294 22 20.74417850362979 25.303197967444774 22.26366616743142 31.68895736149402 23 16.257341461010363 32.88688346831764 24.07546083865162 26.780314232020373 24 15.02698096228389 22.609235534102222 47.52369777506431 14.840085728549578 25 12.84147531965365 24.974004788842567 43.62624451079715 18.558275380706625 26 12.877407538134259 39.28528273568197 27.809470206467164 20.02783951971661 27 13.318451671166143 42.68676009043472 27.37828358469987 16.61650465369927 28 10.442522759721573 32.02840553165374 42.252314130265425 15.276757578359264 29 11.394647053399092 24.2134659963559 41.9237569201319 22.468130030113105 30 15.107033493279404 36.91693615830527 31.188768160874584 16.78726218754074 31 31.517563859183863 28.53018147360254 24.297811314515027 15.654443352698575 32 35.46708704182447 24.11552685217867 25.99075937815003 14.426626727846834 33 33.350504481987784 25.78661349970269 22.76059602964885 18.102285988660682 34 19.434639930552244 25.218137184758383 26.680705670612852 28.666517214076524 35 19.23494583138568 23.661524861597364 33.957377393228846 23.146151913788117 36 35.33329517522521 23.90533927327883 24.5023546732553 16.259010878240655 37 19.092488894400617 37.382783061615804 28.23143528543855 15.293292758545032 38 17.807832587660304 38.257398698172544 23.347117949892045 20.587650764275107 39 18.835637129111138 37.527227400065506 25.910547855037347 17.72658761578601 40 26.101258899583758 24.778682972898203 24.17236653406724 24.947691593450795 41 14.820529698137566 22.58133241753874 26.424330881674884 36.173807002648815 42 18.560342278229847 22.285130103249482 24.80944794757076 34.345079670949914 43 18.422496112642737 24.029273628613492 27.64483386913677 29.903396389607 44 15.791415061641246 29.732797847882704 32.33502182961769 22.140765260858366 45 13.403671445969708 44.86479310355793 22.132656662882656 19.59887878758971 46 20.02688556701359 38.746060970297094 24.317764825219964 16.909288637469356 47 18.94176436732267 28.458476028758493 25.873105211443615 26.72665439247522 48 20.222922847485222 23.441797755667274 36.05893519799289 20.27634419885462 49 20.65172458749495 23.309595810239728 37.145010350386826 18.893669251878492 50 18.610186306962902 38.75822386726066 25.455273927518675 17.176315898257766 51 15.50952203789736 37.422690083025685 24.505693507715886 22.56209437136107 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5046.0 1 4078.0 2 3110.0 3 5743.0 4 8376.0 5 5962.0 6 3548.0 7 3824.5 8 4101.0 9 4823.5 10 5546.0 11 6174.0 12 6802.0 13 6656.0 14 6510.0 15 6019.5 16 5529.0 17 5196.5 18 4864.0 19 4670.0 20 4476.0 21 4323.0 22 4170.0 23 4992.0 24 5814.0 25 5609.0 26 6676.5 27 7949.0 28 9986.5 29 12024.0 30 13826.5 31 15629.0 32 18830.5 33 22032.0 34 30106.0 35 38180.0 36 37389.5 37 36599.0 38 47561.5 39 58524.0 40 85214.5 41 111905.0 42 138269.0 43 164633.0 44 163125.5 45 161618.0 46 147692.0 47 133766.0 48 118662.0 49 103558.0 50 95079.0 51 86600.0 52 76936.0 53 67272.0 54 55325.5 55 43379.0 56 37680.5 57 31982.0 58 28596.0 59 25210.0 60 22835.5 61 20461.0 62 17075.0 63 13689.0 64 12062.0 65 10435.0 66 8785.0 67 7135.0 68 5993.5 69 4852.0 70 4157.5 71 3463.0 72 2583.0 73 1703.0 74 1321.0 75 781.0 76 623.0 77 388.5 78 154.0 79 157.0 80 160.0 81 101.5 82 43.0 83 66.5 84 90.0 85 51.5 86 13.0 87 10.0 88 7.0 89 4.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1257924.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.974637902140856 #Duplication Level Percentage of deduplicated Percentage of total 1 79.2697451309359 14.248449653235662 2 8.104265163016708 2.913424635363197 3 2.8580767882105054 1.541186860937927 4 1.3561388637727096 0.9750442008534073 5 0.8188837016098407 0.7359569010200822 6 0.5380309406115803 0.5802546802584845 7 0.3785024684758756 0.47624113711442434 8 0.3076881554255046 0.4424466544440866 9 0.25700043094782277 0.41575407182831414 >10 3.4095295788446722 15.263553087469116 >50 1.38964528479635 17.429962948092903 >100 1.2987979090740878 42.310274775800835 >500 0.010956467422769105 1.2155210471628843 >1k 0.0022825973797435633 1.037948135122077 >5k 4.565194759487127E-4 0.4139812112966146 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5045 0.40105761556342034 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4553 0.361945554739396 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4230 0.33626832781630683 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1406 0.11177145837109395 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1390 0.11049952143372731 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.033149856430118196 0.0 2 0.0 0.0 0.0 0.12838613461544576 0.0 3 0.0 0.0 0.0 0.1747323367707429 0.0 4 0.0 0.0 0.0 0.23785220728756268 0.0 5 0.0 0.0 0.0 0.43603588134100313 0.0 6 0.0 0.0 0.0 0.5741205351038695 0.0 7 0.0 0.0 0.0 0.6884358673496968 0.0 8 0.0 0.0 0.0 0.9703288910935796 0.0 9 0.0 0.0 0.0 1.1045182379857608 0.0 10 0.0 0.0 0.0 1.415029842820393 0.0 11 0.0 0.0 0.0 1.6710866475240158 0.0 12 0.0 0.0 0.0 1.9371599556094008 0.0 13 0.0 0.0 0.0 2.0279444545139453 0.0 14 0.0 0.0 0.0 2.0595043897723553 0.0 15 0.0 0.0 0.0 2.114436166254877 0.0 16 0.0 0.0 0.0 2.2408348994056873 0.0 17 0.0 0.0 0.0 2.3797940098129935 0.0 18 0.0 0.0 0.0 2.628696169243929 0.0 19 0.0 0.0 0.0 2.738321234033217 0.0 20 0.0 0.0 0.0 2.8433355274245504 0.0 21 0.0 0.0 0.0 2.969018796048092 0.0 22 7.949605858541534E-5 0.0 0.0 3.0931121434999254 0.0 23 7.949605858541534E-5 0.0 0.0 3.2411338045859686 0.0 24 1.5899211717083068E-4 0.0 0.0 3.356880065886333 0.0 25 1.5899211717083068E-4 0.0 0.0 3.4414638722212154 0.0 26 1.5899211717083068E-4 0.0 0.0 3.532963835653028 0.0 27 1.5899211717083068E-4 0.0 0.0 3.6254177517878663 0.0 28 1.5899211717083068E-4 0.0 0.0 3.7154072901065565 0.0 29 1.5899211717083068E-4 0.0 0.0 3.8092126392373467 0.0 30 1.5899211717083068E-4 0.0 0.0 3.969556189404129 0.0 31 1.5899211717083068E-4 0.0 0.0 4.093411048680206 0.0 32 1.5899211717083068E-4 0.0 0.0 4.1971534051341735 0.0 33 1.5899211717083068E-4 0.0 0.0 4.305109052693168 0.0 34 1.5899211717083068E-4 0.0 0.0 4.4210143061107035 0.0 35 1.5899211717083068E-4 0.0 0.0 4.593520753241054 0.0 36 1.5899211717083068E-4 0.0 0.0 4.718806541571669 0.0 37 1.5899211717083068E-4 0.0 0.0 4.847987636772968 0.0 38 3.1798423434166136E-4 0.0 0.0 4.969934590642996 0.0 39 3.9748029292707666E-4 0.0 0.0 5.106349827175569 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTACG 40 6.8157533E-9 45.000004 1 TCGCAAT 20 7.03354E-4 45.000004 11 GATCGAC 25 3.8910155E-5 45.000004 9 ACGCATT 20 7.03354E-4 45.000004 43 TAGACTC 20 7.03354E-4 45.000004 34 TAAGTCG 40 6.8157533E-9 45.000004 1 ATAGACG 40 6.8157533E-9 45.000004 1 TCGATGC 20 7.03354E-4 45.000004 20 ATCGTAT 40 6.8157533E-9 45.000004 13 ATCCGAT 20 7.03354E-4 45.000004 32 ACTACGG 20 7.03354E-4 45.000004 2 TACTCTA 20 7.03354E-4 45.000004 28 GCGATCG 25 3.8910155E-5 45.000004 33 ACATGTC 25 3.8910155E-5 45.000004 19 ACGTAAG 20 7.03354E-4 45.000004 1 GTCCACA 20 7.03354E-4 45.000004 21 CCAGTAC 40 6.8157533E-9 45.000004 33 CGATCGC 25 3.8910155E-5 45.000004 34 GCATGCG 25 3.8910155E-5 45.000004 1 ATGCACG 65 0.0 45.000004 1 >>END_MODULE