##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545246_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3070071 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.352340385613232 31.0 31.0 34.0 30.0 34.0 2 31.62615294564849 31.0 31.0 34.0 30.0 34.0 3 31.70529541499203 31.0 31.0 34.0 30.0 34.0 4 35.46498175449363 37.0 35.0 37.0 33.0 37.0 5 35.34149210229992 37.0 35.0 37.0 33.0 37.0 6 35.32850054607857 37.0 35.0 37.0 33.0 37.0 7 35.924309893810275 37.0 35.0 37.0 35.0 37.0 8 36.02317112535834 37.0 35.0 37.0 35.0 37.0 9 37.706148815450845 39.0 38.0 39.0 35.0 39.0 10 36.887028997049256 39.0 37.0 39.0 32.0 39.0 11 36.60532834582653 39.0 35.0 39.0 32.0 39.0 12 35.95645833597985 37.0 35.0 39.0 31.0 39.0 13 35.67265252171693 37.0 35.0 39.0 31.0 39.0 14 36.4906883261006 38.0 35.0 41.0 31.0 41.0 15 36.82850526909638 38.0 35.0 41.0 31.0 41.0 16 36.68050120013511 38.0 35.0 41.0 31.0 41.0 17 36.76605785338515 38.0 35.0 40.0 32.0 41.0 18 36.784870121896205 38.0 35.0 40.0 32.0 41.0 19 36.742012155419204 38.0 35.0 40.0 31.0 41.0 20 36.648597703440736 38.0 35.0 40.0 31.0 41.0 21 36.55981962632134 38.0 35.0 40.0 31.0 41.0 22 36.47433463265182 38.0 35.0 40.0 31.0 41.0 23 36.40260958134193 38.0 35.0 40.0 31.0 41.0 24 36.198689541707665 38.0 35.0 40.0 31.0 41.0 25 36.179801379186344 38.0 35.0 40.0 31.0 41.0 26 36.079650275189074 38.0 35.0 40.0 30.0 41.0 27 36.063501137270116 38.0 34.0 40.0 30.0 41.0 28 36.08152221886725 38.0 35.0 40.0 30.0 41.0 29 36.0583569565655 37.0 35.0 40.0 30.0 41.0 30 35.95816350827066 37.0 35.0 40.0 30.0 41.0 31 35.86206703362886 37.0 34.0 40.0 30.0 41.0 32 35.72858543010894 37.0 34.0 40.0 30.0 41.0 33 35.57082034910593 37.0 34.0 40.0 29.0 41.0 34 35.40958075562422 37.0 34.0 40.0 29.0 41.0 35 35.22965885805247 37.0 34.0 40.0 27.0 41.0 36 35.0769487090038 37.0 34.0 40.0 27.0 41.0 37 34.919849736374175 37.0 34.0 40.0 26.0 41.0 38 34.948129212646876 37.0 34.0 40.0 27.0 41.0 39 34.93301913864533 37.0 34.0 40.0 27.0 41.0 40 34.81968853489056 37.0 34.0 40.0 26.0 41.0 41 34.80119515151278 37.0 34.0 40.0 26.0 41.0 42 34.74705861851403 36.0 33.0 40.0 26.0 41.0 43 34.621289214483966 36.0 33.0 40.0 26.0 41.0 44 34.55692751079698 36.0 33.0 40.0 26.0 41.0 45 34.50033435708816 36.0 33.0 40.0 25.0 41.0 46 34.41515652243873 36.0 33.0 40.0 25.0 41.0 47 34.43694396644247 36.0 33.0 40.0 25.0 41.0 48 34.40573882493271 36.0 33.0 40.0 25.0 41.0 49 34.394126064185485 36.0 33.0 40.0 25.0 41.0 50 34.20334383146188 35.0 33.0 40.0 24.0 41.0 51 34.03585552255958 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 4.0 13 6.0 14 22.0 15 75.0 16 205.0 17 521.0 18 1249.0 19 2436.0 20 4524.0 21 7240.0 22 11299.0 23 16195.0 24 23673.0 25 33371.0 26 44189.0 27 52592.0 28 60371.0 29 69928.0 30 85334.0 31 105412.0 32 133985.0 33 176052.0 34 286506.0 35 403973.0 36 236965.0 37 291909.0 38 412952.0 39 608745.0 40 334.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.889685938859397 23.756681848725975 29.47208712762669 14.881545084787943 2 32.20638871218288 25.479019866315795 28.945454355941607 13.369137065559721 3 28.663213326336752 25.533350857358023 32.12251443044802 13.6809213858572 4 25.426284929566776 28.22319092946059 31.471389423892802 14.879134717079834 5 22.596024652198597 32.56953992269234 30.57798989013609 14.25644553497297 6 20.91557491667131 40.61453301894321 28.007072149145735 10.462819915239745 7 86.92649127658612 4.64393168757335 6.762319177634654 1.6672578582058852 8 89.0739660418277 3.0354672579233513 6.370308699701082 1.52025800054787 9 85.0355578095751 4.416477664523068 7.97108601071441 2.576878515187434 10 47.004417813138524 24.971148875710043 15.527751638317158 12.496681672834278 11 38.87809109300729 24.931801251502 22.383684286128886 13.806423369361816 12 35.026486358133084 23.208779210643662 26.996834926618963 14.76789950460429 13 21.747347211188277 35.86376341133479 26.923090703765485 15.465798673711456 14 16.587824841835904 37.46193491942043 29.964714171105488 15.985526067638176 15 16.054840425514588 24.59161367929276 43.99510630210181 15.358439593090845 16 18.566313287217138 21.276967210204585 41.58053673677254 18.576182765805743 17 18.83839168540402 21.665036411210036 30.413922023301744 29.082649880084205 18 21.195926739153588 24.112732246257497 35.7429844456366 18.948356568952317 19 28.107688714690966 24.741251912415056 28.03762518847284 19.11343418442114 20 28.69529727488387 25.252966462339145 27.959060230203146 18.09267603257384 21 22.190724579333835 29.01584360752569 30.233958758608516 18.559473054531963 22 21.574517332009584 25.50445901739732 27.522523094742763 25.39850055585034 23 19.238186999584048 29.846052420286046 28.41644378908501 22.499316791044897 24 18.819141316275747 24.58920331158465 39.304791322415674 17.28686404972393 25 18.772302008650616 26.77687258698577 35.515660712732696 18.93516469163091 26 17.92623037056798 32.91005322026754 28.670965590046617 20.492750819117862 27 17.2094391302351 33.90755458098526 30.152755424874538 18.730250863905102 28 16.461541117452985 28.982815055417284 36.639478370369936 17.916165456759796 29 17.301163393289603 26.306655448685063 35.89086376178271 20.501317396242627 30 19.218610905089818 31.656010561319263 31.315692698963637 17.809685834627278 31 27.145072540667627 27.825154532256747 28.049839889696358 16.979933037379265 32 28.220780561752477 26.023404670445732 28.53412836380657 17.221686403995218 33 27.269239050171805 26.745537806780362 26.966900765487186 19.018322377560647 34 20.320832970963863 27.088135746697716 29.37629129749768 23.21473998484074 35 20.389430733035162 26.644888668698542 32.44859809431118 20.51708250395512 36 27.70473386446112 27.74066137232657 26.59156742629079 17.963037336921523 37 20.52691941000713 33.72365003936391 28.505399386528847 17.24403116410011 38 20.526561112104574 33.313268650790164 26.361247020020055 19.798923217085207 39 20.72173575138816 32.447099757627754 27.52095961298615 19.310204877997936 40 24.2664420464543 26.32427719098353 27.623074515214796 21.786206247347373 41 17.80561426755277 26.446000760243006 29.249714420285393 26.498670551918828 42 19.685245064364963 26.418444394282737 27.3320714732656 26.5642390680867 43 19.89312299292101 26.110568778376788 29.287824288102783 24.708483940599418 44 18.54966872101655 29.2603982122889 31.204392341414906 20.985540725279645 45 17.838317094295213 35.723538641288755 26.713942446282186 19.72420181813385 46 20.530437243959504 33.144184613320014 27.48275202755897 18.842626115161508 47 19.50687785396494 28.915878492712384 28.365728349604947 23.211515303717732 48 19.86719525379055 27.136766543835634 32.778101874516906 20.217936327856915 49 20.767663027988604 26.85533982764568 33.181480167722505 19.195516976643212 50 19.88716221872393 33.868858407509144 27.6420317315137 18.601947642253226 51 18.163293291914094 33.182196763527614 27.880364981787064 20.774144962771217 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 9703.0 1 8354.0 2 7005.0 3 19664.5 4 32324.0 5 22729.5 6 13135.0 7 12978.5 8 12822.0 9 13514.0 10 14206.0 11 14529.5 12 14853.0 13 14920.5 14 14988.0 15 14075.0 16 13162.0 17 13065.5 18 12969.0 19 13608.0 20 14247.0 21 14859.5 22 15472.0 23 18127.5 24 20783.0 25 23757.0 26 31222.5 27 35714.0 28 43001.0 29 50288.0 30 59213.5 31 68139.0 32 77922.5 33 87706.0 34 101373.5 35 115041.0 36 124793.5 37 134546.0 38 148354.5 39 162163.0 40 192743.5 41 223324.0 42 256620.0 43 289916.0 44 284792.5 45 279669.0 46 268242.5 47 256816.0 48 240669.0 49 224522.0 50 206876.5 51 189231.0 52 169273.5 53 149316.0 54 134212.0 55 119108.0 56 112011.0 57 104914.0 58 97328.5 59 89743.0 60 82976.0 61 76209.0 62 67480.5 63 58752.0 64 51429.5 65 44107.0 66 36092.0 67 28077.0 68 24252.5 69 20428.0 70 17521.0 71 14614.0 72 12812.0 73 11010.0 74 9453.0 75 5419.5 76 2943.0 77 2390.5 78 1838.0 79 1335.0 80 832.0 81 685.0 82 538.0 83 328.5 84 119.0 85 90.0 86 61.0 87 51.0 88 41.0 89 39.5 90 38.0 91 24.0 92 10.0 93 6.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3070071.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.341806358338168 #Duplication Level Percentage of deduplicated Percentage of total 1 77.49161134910871 12.663529070627346 2 7.0922491633553335 2.318003249452775 3 2.69752889429801 1.3224748450992045 4 1.5117291419868248 0.988175396184216 5 0.9928103146083629 0.811215695594533 6 0.7293939849066715 0.7151769156168876 7 0.5406109086162875 0.6184191148668835 8 0.4546796942383176 0.5944230014648795 9 0.3643866037154312 0.5359261785741075 >10 5.008221047941632 19.952875993483612 >50 1.7700889873999637 20.248976255755686 >100 1.3382331406683787 37.26706555619146 >500 0.007219193182106897 0.7367685867711207 >1k 8.250506493836454E-4 0.30717229990141925 >5k 2.0626266234591135E-4 0.29301534105596816 >10k+ 2.0626266234591135E-4 0.6267824993599135 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18595 0.6056863180037205 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8693 0.28315306062954243 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0077196911732660255 0.0 2 0.0 0.0 0.0 0.041073968647630625 0.0 3 0.0 0.0 0.0 0.07211559602367502 0.0 4 0.0 0.0 0.0 0.10944372296275884 0.0 5 0.0 0.0 0.0 0.20699847006795608 0.0 6 3.257253659605918E-5 0.0 0.0 0.3421419244050056 0.0 7 3.257253659605918E-5 0.0 0.0 0.42858943653094667 0.0 8 3.257253659605918E-5 0.0 0.0 0.6072823722969274 0.0 9 3.257253659605918E-5 0.0 0.0 0.7067914715978881 0.0 10 3.257253659605918E-5 0.0 0.0 0.856950865305721 0.0 11 3.257253659605918E-5 0.0 0.0 1.0023546686705291 0.0 12 3.257253659605918E-5 0.0 0.0 1.1198763807091106 0.0 13 3.257253659605918E-5 0.0 0.0 1.1715364237504604 0.0 14 3.257253659605918E-5 0.0 0.0 1.1954120930753718 0.0 15 6.514507319211836E-5 0.0 0.0 1.2227730238160617 0.0 16 6.514507319211836E-5 0.0 0.0 1.2851168588609188 0.0 17 1.302901463842367E-4 0.0 0.0 1.3532586054198747 0.0 18 1.302901463842367E-4 0.0 0.0 1.4537448808187172 0.0 19 1.302901463842367E-4 0.0 0.0 1.5063495274213528 0.0 20 1.302901463842367E-4 0.0 0.0 1.5657618341725648 0.0 21 1.302901463842367E-4 0.0 0.0 1.6387894612209295 0.0 22 2.2800775617241425E-4 0.0 0.0 1.7207093907600182 0.0 23 2.2800775617241425E-4 0.0 0.0 1.813573692595383 0.0 24 3.257253659605918E-4 0.0 0.0 1.8868944724731123 0.0 25 3.257253659605918E-4 0.0 0.0 1.949987475859679 0.0 26 3.257253659605918E-4 0.0 0.0 2.0123964559777283 0.0 27 3.257253659605918E-4 0.0 0.0 2.0787141404873046 0.0 28 3.257253659605918E-4 0.0 0.0 2.147702772997758 0.0 29 3.257253659605918E-4 0.0 0.0 2.2288409616585416 0.0 30 3.257253659605918E-4 0.0 0.0 2.337600661352783 0.0 31 3.9087043915271016E-4 0.0 0.0 2.4253510749425664 0.0 32 4.2344297574876933E-4 0.0 0.0 2.51310148853235 0.0 33 4.2344297574876933E-4 0.0 0.0 2.598441534414025 0.0 34 4.2344297574876933E-4 0.0 0.0 2.6927390278596164 0.0 35 4.2344297574876933E-4 0.0 0.0 2.808729830678183 0.0 36 4.2344297574876933E-4 0.0 0.0 2.9075874792472227 0.0 37 4.2344297574876933E-4 0.0 0.0 3.01390423869676 0.0 38 4.2344297574876933E-4 0.0 0.0 3.1305790647838436 0.0 39 4.2344297574876933E-4 0.0 0.0 3.292073701227105 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 11035 0.0 41.28908 1 TAGGGCG 1280 0.0 39.023438 5 GACCGAT 1200 0.0 38.4375 9 TAGTACG 100 0.0 38.25 1 AGGGCGA 2580 0.0 38.110462 6 ACGGGAT 870 0.0 38.01724 5 GGACGTA 30 1.1403664E-4 37.500004 8 GGACCGA 1300 0.0 37.384617 8 CGAGGGA 1505 0.0 37.375416 4 ACGGGTA 560 0.0 37.36607 5 AACGGGA 730 0.0 37.29452 4 GGGCGAT 4725 0.0 37.285713 7 CGACCCG 955 0.0 37.225132 32 ATAGGGC 1700 0.0 37.191177 4 TATCGAG 230 0.0 37.173916 1 ACGGGAC 715 0.0 37.132866 5 CGAGGGT 540 0.0 37.083336 4 TATTGCG 170 0.0 37.058823 1 CGTTGAT 705 0.0 37.021275 25 TACGGGT 335 0.0 36.9403 4 >>END_MODULE