##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545243_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4071561 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.203161883120504 31.0 31.0 33.0 30.0 34.0 2 31.46335987597877 31.0 31.0 34.0 30.0 34.0 3 31.549933796890187 31.0 31.0 34.0 30.0 34.0 4 35.315683346018886 37.0 35.0 37.0 33.0 37.0 5 35.168807737376405 37.0 35.0 37.0 32.0 37.0 6 35.16564654195283 37.0 35.0 37.0 32.0 37.0 7 35.82552809598088 37.0 35.0 37.0 35.0 37.0 8 35.916353948768055 37.0 35.0 37.0 35.0 37.0 9 37.55525460628 39.0 37.0 39.0 35.0 39.0 10 36.7541294358601 39.0 37.0 39.0 32.0 39.0 11 36.40355357564334 38.0 35.0 39.0 32.0 39.0 12 35.45131068894707 37.0 35.0 39.0 30.0 39.0 13 34.996447062932376 37.0 34.0 39.0 29.0 39.0 14 35.78259001891412 38.0 34.0 40.0 28.0 41.0 15 36.23114500802026 38.0 35.0 40.0 30.0 41.0 16 36.173374290597636 38.0 35.0 40.0 31.0 41.0 17 36.251649428806296 37.0 35.0 40.0 31.0 41.0 18 36.31526164043717 37.0 35.0 40.0 31.0 41.0 19 36.24423237181022 37.0 35.0 40.0 31.0 41.0 20 36.108032029975725 37.0 34.0 40.0 31.0 41.0 21 35.95560842635048 37.0 34.0 40.0 30.0 41.0 22 35.85314330302309 36.0 34.0 40.0 30.0 41.0 23 35.816478004382105 36.0 34.0 40.0 30.0 41.0 24 35.63604646964641 36.0 34.0 40.0 30.0 41.0 25 35.62172444426106 36.0 34.0 40.0 30.0 41.0 26 35.472416107728705 36.0 34.0 40.0 29.0 41.0 27 35.4334077274048 36.0 34.0 40.0 29.0 41.0 28 35.47007449968206 36.0 34.0 40.0 29.0 41.0 29 35.474377763221526 36.0 34.0 40.0 29.0 41.0 30 35.39270859505728 36.0 34.0 40.0 29.0 41.0 31 35.265189198933776 36.0 34.0 40.0 29.0 41.0 32 35.12621621044116 36.0 34.0 40.0 29.0 41.0 33 34.9522313432121 36.0 34.0 40.0 27.0 41.0 34 34.80067227287028 36.0 34.0 40.0 27.0 41.0 35 34.63102136993649 35.0 33.0 40.0 26.0 41.0 36 34.43733865217787 35.0 33.0 40.0 25.0 41.0 37 34.275402480768435 35.0 33.0 40.0 24.0 41.0 38 34.3315340234372 35.0 33.0 40.0 25.0 41.0 39 34.345803734734666 35.0 33.0 40.0 25.0 41.0 40 34.181202246509386 35.0 33.0 40.0 24.0 41.0 41 34.183990120742386 35.0 33.0 40.0 24.0 41.0 42 34.14649098957378 35.0 33.0 40.0 24.0 41.0 43 34.004994153348065 35.0 33.0 40.0 24.0 41.0 44 33.97580043624546 35.0 33.0 40.0 24.0 41.0 45 33.92020234990953 35.0 33.0 39.0 23.0 41.0 46 33.849574647168495 35.0 33.0 39.0 23.0 41.0 47 33.87484726373988 35.0 33.0 39.0 23.0 41.0 48 33.86474720629263 35.0 33.0 39.0 23.0 41.0 49 33.848631765556256 35.0 33.0 39.0 24.0 41.0 50 33.644760080961575 35.0 33.0 39.0 24.0 41.0 51 33.44182440100983 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 12.0 12 11.0 13 25.0 14 39.0 15 145.0 16 373.0 17 1003.0 18 2262.0 19 4591.0 20 7905.0 21 12601.0 22 18633.0 23 26811.0 24 37889.0 25 52828.0 26 68657.0 27 82003.0 28 93791.0 29 108581.0 30 129563.0 31 159092.0 32 199341.0 33 258712.0 34 429151.0 35 609624.0 36 287089.0 37 344756.0 38 464581.0 39 670987.0 40 500.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.21343804010304 23.770342627802947 28.490424188658846 13.52579514343516 2 31.65911059664831 25.550249646265893 29.448533375774062 13.342106381311739 3 29.09434489622039 25.818795297430153 31.136436369245114 13.950423437104345 4 26.574647905311995 28.0193272310055 30.799391191732116 14.606633671950389 5 23.045190775724596 32.503111214593126 29.067500155345826 15.384197854336456 6 21.51685803061774 41.584394781264486 26.50465018208004 10.394097006037734 7 86.14175251212004 5.110717977699462 6.747436671094944 2.00009283908555 8 87.51532888737268 4.064092371451637 6.521847517450924 1.8987312237247582 9 83.29218204025433 5.51670477244477 7.917307391440286 3.273805795860605 10 52.94824270101811 22.783325609023173 13.779776356046245 10.488655333912472 11 47.120649795004915 20.937620730722198 19.28650952300604 12.655219951266849 12 42.21641282053738 20.943073184952894 23.795345323329308 13.045168671180415 13 21.29856337655263 41.04536319116919 23.42256446606105 14.233508966217133 14 14.755814784550692 43.251224775952025 27.181270279384247 14.81169016011304 15 13.837469216352154 23.963757389364915 48.50535212416073 13.693421270122197 16 15.803668421030656 18.689146496884117 46.771299754565874 18.735885327519348 17 15.642821021225028 18.97522841976333 30.142837108421073 35.23911345059057 18 20.27347742057653 23.028563246381424 37.07455199615086 19.623407336891184 19 30.97946954497305 23.1003538937523 26.23067663728973 19.68949992398493 20 32.533296197699116 22.41602176659026 25.99366680248681 19.05701523322382 21 21.96803633790578 29.79405196188882 28.297844487654732 19.940067212550666 22 21.261796151402372 25.78497534483703 24.6356618505777 28.317566653182897 23 18.92635281652418 30.937814759498877 26.121529310257174 24.014303113719777 24 18.351438183045765 23.13842283094862 41.44933601633378 17.06080296967183 25 17.207478900598566 25.071538901173284 38.180835311076024 19.540146887152126 26 15.856645645245152 36.35274038630393 27.54189363735432 20.2487203310966 27 16.922232038277212 37.28601880212528 28.597238258250336 17.194510901347172 28 15.243883120012203 29.724938420424007 38.2558433976551 16.775335061908688 29 15.578398555246991 26.56229392117667 36.998610606595356 20.86069691698098 30 19.08422838316803 33.47996014305078 29.20597284432187 18.229838629459316 31 29.814609187974835 27.566970014694608 24.84474627790177 17.773674519428788 32 31.697940912588564 25.9701868644483 26.76496803068897 15.566904192274167 33 30.163369773902442 26.534417634907104 23.99612826628411 19.306084324906344 34 19.876848216200127 27.31458524138531 27.148801160046474 25.65976538236809 35 20.772082255429797 25.424253744448382 31.2236756369363 22.57998836318552 36 30.83895832581165 26.680062020438843 24.81728752191113 17.663692131838378 37 19.834481173191314 36.55794423809443 26.907616022454288 16.69995856625997 38 19.521922918507176 36.18209330524583 23.308210290844226 20.987773485402773 39 20.89994476320016 33.840165970741936 26.022869361407086 19.237019904650822 40 25.5464673131509 25.135470155058464 26.20233369953195 23.115728832258682 41 16.355275040703063 24.74456357156383 27.77909995699438 31.121061430738727 42 19.74348413298978 25.731654272157535 24.905853062253026 29.61900853259966 43 19.994886482113372 25.748576528756416 27.452173748594213 26.804363240536 44 18.08905724364685 29.8331278838755 30.949284561867056 21.1285303106106 45 16.72400339820526 39.45567805566464 23.61433366711195 20.205984879018146 46 20.596400250419926 34.90184722763579 24.936725742289013 19.565026779655273 47 20.681478184902545 28.069258940244296 26.659455673143544 24.589807201709615 48 20.902474505478366 26.22998894035973 32.58858211875003 20.278954435411872 49 20.60111588651134 26.653020794727134 33.32618619738228 19.419677121379245 50 19.087544064794805 35.85804068758887 25.923546276231647 19.130868971384686 51 17.945746115556172 34.7008432392392 25.721265136393633 21.632145508810993 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 8198.0 1 8573.5 2 8949.0 3 20506.5 4 32064.0 5 23595.0 6 15126.0 7 15230.5 8 15335.0 9 16312.5 10 17290.0 11 17692.0 12 18094.0 13 18194.0 14 18294.0 15 17592.0 16 16890.0 17 15816.5 18 14743.0 19 15921.0 20 17099.0 21 18896.5 22 20694.0 23 20558.0 24 20422.0 25 22320.0 26 31414.5 27 38611.0 28 47786.5 29 56962.0 30 67344.0 31 77726.0 32 87654.5 33 97583.0 34 109886.0 35 122189.0 36 128369.5 37 134550.0 38 158883.5 39 183217.0 40 250046.0 41 316875.0 42 384233.5 43 451592.0 44 445963.5 45 440335.0 46 407581.0 47 374827.0 48 345490.0 49 316153.0 50 272461.5 51 228770.0 52 204128.0 53 179486.0 54 166383.0 55 153280.0 56 140274.5 57 127269.0 58 126088.0 59 124907.0 60 118332.5 61 111758.0 62 101260.5 63 90763.0 64 76658.0 65 62553.0 66 53279.5 67 44006.0 68 37983.0 69 31960.0 70 27202.0 71 22444.0 72 19505.0 73 16566.0 74 12900.5 75 7356.0 76 5477.0 77 3967.5 78 2458.0 79 1906.0 80 1354.0 81 1000.5 82 647.0 83 510.5 84 374.0 85 283.0 86 192.0 87 105.5 88 19.0 89 12.0 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4071561.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.163663468225122 #Duplication Level Percentage of deduplicated Percentage of total 1 78.80470869681848 11.949680823900689 2 8.379623043964633 2.5413156765852785 3 3.078186250379838 1.4002974117983287 4 1.5815001636160584 0.9592534502406751 5 0.9601090825889861 0.7279385510582873 6 0.6906752172355572 0.6283899936001962 7 0.4824683758805396 0.5121191660139551 8 0.4009999079363949 0.4864502123789399 9 0.2783559424157459 0.37988062516557186 >10 2.684863582191801 9.657332403935776 >50 1.0937928999574 12.124103644328233 >100 1.4715392707254538 47.884888663705254 >500 0.08260065335902711 7.653407436965663 >1k 0.010073250409637451 2.2370108269088576 >5k 3.357750136545817E-4 0.39049867503448193 >10k+ 1.6788750682729086E-4 0.4674324383798242 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18361 0.450957261846255 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8204 0.20149520048944372 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7135 0.17523991412630194 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4646 0.11410856917039927 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 4632 0.11376472070540021 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4286 0.1052667514989951 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02927624073420489 0.0 2 0.0 0.0 0.0 0.10074760024472186 0.0 3 0.0 0.0 0.0 0.14056034037068338 0.0 4 0.0 0.0 0.0 0.1990391400251648 0.0 5 0.0 0.0 0.0 0.3685073120604112 0.0 6 0.0 0.0 0.0 0.5205128941946344 0.0 7 0.0 0.0 0.0 0.6241832063918482 0.0 8 0.0 0.0 0.0 0.8876448123950494 0.0 9 0.0 0.0 0.0 0.9830382008276433 0.0 10 0.0 0.0 0.0 1.163877932812501 0.0 11 4.9121209285578674E-5 0.0 0.0 1.353485800654835 0.0 12 4.9121209285578674E-5 0.0 0.0 1.5202523061793745 0.0 13 7.368181392836801E-5 0.0 0.0 1.5874255598774032 0.0 14 7.368181392836801E-5 0.0 0.0 1.6104634070323396 0.0 15 9.824241857115735E-5 0.0 0.0 1.6548689802265029 0.0 16 1.2280302321394668E-4 0.0 0.0 1.7536517320998015 0.0 17 1.4736362785673602E-4 0.0 0.0 1.8767986037787472 0.0 18 1.4736362785673602E-4 0.0 0.0 2.0598242295768134 0.0 19 1.4736362785673602E-4 0.0 0.0 2.134242861644465 0.0 20 1.4736362785673602E-4 0.0 0.0 2.2196646445920862 0.0 21 1.964848371423147E-4 0.0 0.0 2.335467895482838 0.0 22 1.964848371423147E-4 0.0 0.0 2.458835812603569 0.0 23 1.964848371423147E-4 0.0 0.0 2.5992487893463956 0.0 24 1.964848371423147E-4 0.0 0.0 2.7149046766092906 0.0 25 1.964848371423147E-4 0.0 0.0 2.806147322857253 0.0 26 1.964848371423147E-4 0.0 0.0 2.905151120172337 0.0 27 2.2104544178510403E-4 0.0 0.0 2.9929798423749516 0.0 28 2.2104544178510403E-4 0.0 0.0 3.095078275875027 0.0 29 2.2104544178510403E-4 0.0 0.0 3.207516723929716 0.0 30 2.2104544178510403E-4 0.0 0.0 3.346799912858975 0.0 31 2.2104544178510403E-4 0.0 0.0 3.4817604353711022 0.0 32 2.2104544178510403E-4 0.0 0.0 3.6089106856068227 0.0 33 2.2104544178510403E-4 0.0 0.0 3.7319101936579115 0.0 34 2.2104544178510403E-4 0.0 0.0 3.8669689585886102 0.0 35 2.2104544178510403E-4 0.0 0.0 4.036805539693498 0.0 36 2.4560604642789337E-4 0.0 0.0 4.188197106711652 0.0 37 2.4560604642789337E-4 0.0 0.0 4.3379431132187385 0.0 38 2.4560604642789337E-4 0.0 0.0 4.477299983961925 0.0 39 2.7016665107068273E-4 0.0 0.0 4.628986278235792 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCGC 20 7.0354046E-4 45.0 14 TATATCG 20 7.0354046E-4 45.0 40 CAATTCG 50 2.1827873E-11 45.0 1 TACGATC 25 3.8925595E-5 45.0 11 ACGTCCA 20 7.0354046E-4 45.0 14 TACGTCC 25 3.8925595E-5 45.0 31 GCGTGTT 60 0.0 44.999996 44 TCACGAC 310 0.0 42.09677 25 CGGTCTA 305 0.0 42.049183 31 ATATACG 75 0.0 42.0 1 GTCGATA 70 0.0 41.785713 8 TTACGAG 140 0.0 41.785713 1 ACGTAAG 130 0.0 41.53846 1 TACGGGA 1015 0.0 40.788177 4 TAACGGG 980 0.0 40.408165 3 TATAGCG 140 0.0 40.17857 1 CTAACGG 135 0.0 40.0 2 TCATCGA 850 0.0 39.441174 16 CGGGAAC 400 0.0 39.375 6 ATCGGAT 40 3.4611185E-7 39.375 16 >>END_MODULE