##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545241_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2179441 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.164870258015704 31.0 31.0 33.0 30.0 34.0 2 31.423733425222338 31.0 31.0 34.0 30.0 34.0 3 31.521002862660655 31.0 31.0 34.0 30.0 34.0 4 35.294312165367174 37.0 35.0 37.0 33.0 37.0 5 35.155874373291134 37.0 35.0 37.0 32.0 37.0 6 35.15231520376096 37.0 35.0 37.0 32.0 37.0 7 35.79299370801962 37.0 35.0 37.0 35.0 37.0 8 35.87323538466974 37.0 35.0 37.0 35.0 37.0 9 37.468363676740964 39.0 37.0 39.0 35.0 39.0 10 36.70018550628349 39.0 35.0 39.0 32.0 39.0 11 36.40985693120392 38.0 35.0 39.0 32.0 39.0 12 35.79324836047409 37.0 35.0 39.0 31.0 39.0 13 35.49586705948911 37.0 35.0 39.0 30.0 39.0 14 36.345935494468534 38.0 35.0 40.0 30.0 41.0 15 36.6680368956994 38.0 35.0 40.0 31.0 41.0 16 36.52303870579658 38.0 35.0 40.0 31.0 41.0 17 36.58572450458627 38.0 35.0 40.0 31.0 41.0 18 36.615342649789554 38.0 35.0 40.0 31.0 41.0 19 36.557199759020776 38.0 35.0 40.0 31.0 41.0 20 36.45903926740848 38.0 35.0 40.0 31.0 41.0 21 36.33538691802164 38.0 35.0 40.0 31.0 41.0 22 36.22492969527507 38.0 35.0 40.0 30.0 41.0 23 36.14268658798288 38.0 34.0 40.0 30.0 41.0 24 35.94072287343406 37.0 34.0 40.0 30.0 41.0 25 35.90051669212426 37.0 34.0 40.0 30.0 41.0 26 35.752260327304114 37.0 34.0 40.0 30.0 41.0 27 35.72883872515934 37.0 34.0 40.0 30.0 41.0 28 35.721485004641096 37.0 34.0 40.0 29.0 41.0 29 35.679995466727476 37.0 34.0 40.0 29.0 41.0 30 35.58976636669678 37.0 34.0 40.0 29.0 41.0 31 35.507062131987055 37.0 34.0 40.0 29.0 41.0 32 35.37617122922804 37.0 34.0 40.0 29.0 41.0 33 35.202327110483836 37.0 34.0 40.0 27.0 41.0 34 35.020024400752305 37.0 34.0 40.0 27.0 41.0 35 34.85453930617989 37.0 33.0 40.0 26.0 41.0 36 34.67570491699477 37.0 33.0 40.0 25.0 41.0 37 34.497611543510466 36.0 33.0 40.0 24.0 41.0 38 34.530007465217 36.0 33.0 40.0 25.0 41.0 39 34.49676040782935 36.0 33.0 40.0 24.0 41.0 40 34.35939123839553 36.0 33.0 40.0 24.0 41.0 41 34.31601727231891 36.0 33.0 40.0 24.0 41.0 42 34.230391187465045 36.0 33.0 40.0 24.0 41.0 43 34.09738873408365 35.0 33.0 40.0 23.0 41.0 44 34.04604666976532 35.0 33.0 40.0 23.0 41.0 45 33.99194151160779 35.0 33.0 40.0 23.0 41.0 46 33.87267377277017 35.0 33.0 40.0 23.0 41.0 47 33.8964913480108 35.0 33.0 40.0 23.0 41.0 48 33.81773766759458 35.0 33.0 39.0 23.0 41.0 49 33.77385210244278 35.0 33.0 39.0 24.0 41.0 50 33.58970580070761 35.0 32.0 39.0 23.0 41.0 51 33.42167555809036 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 2.0 10 0.0 11 0.0 12 3.0 13 9.0 14 32.0 15 62.0 16 217.0 17 588.0 18 1341.0 19 2423.0 20 4396.0 21 6768.0 22 10192.0 23 14500.0 24 20316.0 25 28027.0 26 35911.0 27 43023.0 28 49406.0 29 57356.0 30 67732.0 31 82559.0 32 101840.0 33 129933.0 34 200570.0 35 275778.0 36 172775.0 37 210349.0 38 280156.0 39 382928.0 40 247.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.4682691570912 23.302901982664363 26.7063435073489 14.522485352895536 2 33.07013128595819 25.691542005495904 28.423251650308494 12.81507505823741 3 30.502270995177206 25.95261812547346 30.184116018740585 13.360994860608752 4 26.961867744985984 28.257154013345627 29.91721271647179 14.863765525196598 5 23.282208603031695 32.93280249385049 28.918745678364317 14.866243224753504 6 21.53978933130101 41.84885023269728 26.20020454786342 10.411155888138289 7 85.29086128048431 5.480029053321471 7.205792678030742 2.0233169881634785 8 86.22394458028457 4.538870288298696 7.147474971793226 2.0897101596234995 9 81.19582039614745 6.452526129406577 8.831117704035117 3.5205357704108526 10 45.99936405711373 25.385224926942275 15.500304894695475 13.115106121248521 11 38.74479740447207 24.14876108139656 21.822935330665068 15.283506183466312 12 35.81436707853069 22.380738914244525 26.56038865011716 15.244505357107627 13 22.424282189790866 34.846871284884514 26.33597330691677 16.39287321840784 14 17.077727729266357 37.54834381843784 28.49666497051308 16.877263481782716 15 16.243339461816124 25.531684500750423 42.33925121166391 15.885724825769543 16 18.5908680253331 20.743667757007415 41.16055447245417 19.504909745205307 17 18.145845654917935 21.144137418723425 30.737835986383665 29.972180939974972 18 20.955832252398665 24.267461243502346 34.59809189604123 20.178614608057753 19 29.2928324281318 24.891015631990037 26.24842792257281 19.567724017305355 20 30.868374046372445 22.924639850310243 26.731533452844104 19.47545265047322 21 23.37539763636639 28.3532795794885 28.20388347287217 20.067439311272935 22 22.067585220246844 25.61555921908416 25.707004686063996 26.609850874605 23 20.87039750101058 29.858436176983 26.641372718967844 22.62979360303858 24 19.850181766792492 25.084964447305524 36.62558426679134 18.439269519110635 25 19.835040269500297 26.101096565587227 34.05097912721657 20.012884037695905 26 18.75384559618728 32.7833146205839 27.370229338623986 21.09261044460483 27 19.418786743940302 33.492854360361214 27.737112406346398 19.351246489352086 28 18.222011974630192 29.123110008483827 34.619060575624665 18.035817441261315 29 18.499239025052756 26.531115088685585 33.954302961172154 21.015342925089506 30 20.246980762498275 31.116373418688553 29.430987120091807 19.20565869872137 31 27.85911616786139 27.612263878673478 25.34581115065744 19.182808802807692 32 29.000509763742173 26.32115299290047 26.56410519945252 18.114232043904835 33 27.699533963066674 27.344488793227256 24.914966727706783 20.041010515999286 34 21.082516113076704 27.25497042590279 27.150127027985615 24.512386433034894 35 22.194727914176156 25.195313844238044 30.554440335847588 22.055517905738213 36 28.39498752202973 27.673655767694562 24.642603309747773 19.288753400527934 37 21.301930173838155 33.73401711723327 27.09309405485168 17.870958654076894 38 21.026354923120195 33.9486134288563 24.48641647101252 20.538615177010985 39 21.67881580643844 31.899051178719677 25.961290073922626 20.460842940919257 40 24.606034299620866 26.469585549689118 27.36609983936248 21.558280311327536 41 18.601100006836617 25.768763641686103 28.560626325741325 27.069510025735955 42 20.5620156728262 27.500400332011743 25.031189190255667 26.906394804906398 43 20.987675280037404 26.801597290314348 26.797146607776952 25.413580821871296 44 19.70771404227047 29.33077793801255 29.396528742920776 21.564979276796205 45 19.058556758361433 34.829894454587205 24.985030565177034 21.126518221874324 46 20.824147109281693 33.36282101694884 25.386280243420217 20.426751630349248 47 21.853906575126373 28.8920415831399 26.921949252124744 22.332102589608986 48 21.6265546991178 26.35354662044075 31.094028239351285 20.92587044109017 49 21.208374073902437 27.857510251481916 30.932977768152476 20.00113790646317 50 20.046975348265907 33.153363637740135 27.28158275447695 19.518078259517004 51 19.45691578712156 33.21948150924939 26.060673356149582 21.262929347479467 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5955.0 1 5718.5 2 5482.0 3 12888.5 4 20295.0 5 14783.0 6 9271.0 7 9198.5 8 9126.0 9 9527.0 10 9928.0 11 10565.0 12 11202.0 13 10891.5 14 10581.0 15 10433.0 16 10285.0 17 9791.5 18 9298.0 19 9659.5 20 10021.0 21 10595.0 22 11169.0 23 11768.5 24 12368.0 25 15603.0 26 20175.0 27 21512.0 28 26488.0 29 31464.0 30 38032.5 31 44601.0 32 48992.5 33 53384.0 34 62186.0 35 70988.0 36 73543.0 37 76098.0 38 84596.0 39 93094.0 40 121839.5 41 150585.0 42 170830.5 43 191076.0 44 194155.0 45 197234.0 46 189293.5 47 181353.0 48 166679.5 49 152006.0 50 137813.5 51 123621.0 52 112926.5 53 102232.0 54 94796.5 55 87361.0 56 84737.0 57 82113.0 58 82354.5 59 82596.0 60 78297.5 61 73999.0 62 66841.0 63 59683.0 64 51734.5 65 43786.0 66 38022.5 67 32259.0 68 28093.0 69 23927.0 70 21276.0 71 18625.0 72 15982.0 73 13339.0 74 11285.0 75 7005.0 76 4779.0 77 3641.5 78 2504.0 79 1920.0 80 1336.0 81 940.0 82 544.0 83 372.0 84 200.0 85 130.0 86 60.0 87 39.5 88 19.0 89 11.5 90 4.0 91 3.5 92 3.0 93 2.0 94 1.0 95 3.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2179441.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.487563458695583 #Duplication Level Percentage of deduplicated Percentage of total 1 77.16082774317316 15.036765271705654 2 6.674122580857883 2.6012477465116226 3 2.6000396734088533 1.520053143920435 4 1.5473775439197832 1.2061847232678915 5 1.0993160205679813 1.0711495355989615 6 0.8170666160457585 0.9553582518104027 7 0.6426649081039078 0.8766781225546166 8 0.48929451546480707 0.7628126336089707 9 0.4322466655961773 0.7581090893053566 >10 6.279827642588089 29.876399009246114 >50 1.421316617526805 19.293294735907526 >100 0.8273823022699905 23.60736922910123 >500 0.0055969977418631744 0.7826616480412218 >1k 0.002433477279070946 0.8542696878220171 >5k 2.4334772790709456E-4 0.24612299765717047 >10k+ 2.4334772790709456E-4 0.5515241739408271 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11630 0.5336230712370741 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5190 0.23813445741362121 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2772 0.12718857725444277 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2302 0.10562341444434606 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2278 0.1045222146412773 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.588332512786536E-5 0.0 0.0 0.021978112736247505 0.0 2 4.588332512786536E-5 0.0 0.0 0.06694377136155555 0.0 3 4.588332512786536E-5 0.0 0.0 0.1027786482864184 0.0 4 4.588332512786536E-5 0.0 0.0 0.14292655777330057 0.0 5 4.588332512786536E-5 0.0 0.0 0.24854997221764663 0.0 6 4.588332512786536E-5 0.0 0.0 0.40225911139599557 0.0 7 4.588332512786536E-5 0.0 0.0 0.502651826775765 0.0 8 4.588332512786536E-5 0.0 0.0 0.7694174790691741 0.0 9 4.588332512786536E-5 0.0 0.0 0.8965142896733612 0.0 10 4.588332512786536E-5 0.0 0.0 1.0938125877231821 0.0 11 4.588332512786536E-5 0.0 0.0 1.2517888761384226 0.0 12 4.588332512786536E-5 0.0 0.0 1.3908153512758548 0.0 13 9.176665025573072E-5 0.0 0.0 1.4542261066025646 0.0 14 9.176665025573072E-5 0.0 0.0 1.4813890350782608 0.0 15 9.176665025573072E-5 0.0 0.0 1.5152509290226255 0.0 16 9.176665025573072E-5 0.0 0.0 1.581873517108286 0.0 17 9.176665025573072E-5 0.0 0.0 1.664004669087165 0.0 18 1.3764997538359607E-4 0.0 0.0 1.790459113139562 0.0 19 1.8353330051146144E-4 0.0 0.0 1.850107435805787 0.0 20 2.2941662563932678E-4 0.0 0.0 1.920675989852444 0.0 21 2.2941662563932678E-4 0.0 0.0 2.006110741240529 0.0 22 2.2941662563932678E-4 0.0 0.0 2.0998044911516303 0.0 23 2.2941662563932678E-4 0.0 0.0 2.208272671753904 0.0 24 2.2941662563932678E-4 0.0 0.0 2.294533322994291 0.0 25 2.2941662563932678E-4 0.0 0.0 2.3645512771394133 0.0 26 2.2941662563932678E-4 0.0 0.0 2.4313115152004574 0.0 27 2.2941662563932678E-4 0.0 0.0 2.5045413021045304 0.0 28 2.2941662563932678E-4 0.0 0.0 2.5863971541326425 0.0 29 2.2941662563932678E-4 0.0 0.0 2.6789438209155465 0.0 30 2.7529995076719214E-4 0.0 0.0 2.802966448736167 0.0 31 3.670666010229229E-4 0.0 0.0 2.9029462141897855 0.0 32 3.670666010229229E-4 0.0 0.0 3.0057248624762036 0.0 33 3.670666010229229E-4 0.0 0.0 3.10726466098417 0.0 34 4.129499261507882E-4 0.0 0.0 3.2078867929895787 0.0 35 4.129499261507882E-4 0.0 0.0 3.3420955189885846 0.0 36 4.129499261507882E-4 0.0 0.0 3.4525366825713566 0.0 37 4.5883325127865355E-4 0.0 0.0 3.5646755291838597 0.0 38 5.047165764065189E-4 0.0 0.0 3.678007342249687 0.0 39 5.047165764065189E-4 0.0 0.0 3.7976251708580318 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCGA 20 7.0346793E-4 45.000004 26 GACTACG 65 0.0 44.999996 1 TGTAACG 105 0.0 40.714287 1 ACTACGG 150 0.0 39.000004 2 ACGGGTA 245 0.0 38.57143 5 ACCCGCT 980 0.0 38.57143 34 AGGGCGA 1965 0.0 38.47328 6 AAGGGCG 845 0.0 38.343193 5 CGTTTTT 8135 0.0 38.085434 1 CGTATGG 260 0.0 38.07692 2 TAACGGG 615 0.0 38.04878 3 ATAGGGC 970 0.0 38.041237 4 TACGGGC 385 0.0 37.987015 4 CGTAAGG 285 0.0 37.894737 2 CGGTAGT 440 0.0 37.840908 12 GGGCGAT 3710 0.0 37.601078 7 CGGTAAG 30 1.1402575E-4 37.500004 1 TATCGCG 60 1.5643309E-10 37.500004 1 ACGGTCT 150 0.0 37.500004 30 AGGGATC 1220 0.0 37.438526 6 >>END_MODULE