##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545240_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3617850 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.169159860137928 31.0 31.0 33.0 28.0 34.0 2 31.415406111364483 31.0 31.0 34.0 30.0 34.0 3 31.50976933814282 31.0 31.0 34.0 30.0 34.0 4 35.252383321586024 37.0 35.0 37.0 33.0 37.0 5 35.093937836007576 37.0 35.0 37.0 32.0 37.0 6 35.08278535594345 37.0 35.0 37.0 32.0 37.0 7 35.79456666252056 37.0 35.0 37.0 35.0 37.0 8 35.91645894661194 37.0 35.0 37.0 35.0 37.0 9 37.616291167406054 39.0 37.0 39.0 35.0 39.0 10 36.80094780048924 39.0 37.0 39.0 32.0 39.0 11 36.337433835012504 38.0 35.0 39.0 32.0 39.0 12 34.77129068369335 35.0 34.0 39.0 30.0 39.0 13 33.97006979283276 35.0 33.0 39.0 25.0 39.0 14 34.599734372624624 35.0 33.0 40.0 25.0 41.0 15 35.32539795735036 35.0 33.0 40.0 30.0 41.0 16 35.444844313611675 35.0 34.0 40.0 30.0 41.0 17 35.5662280083475 35.0 34.0 40.0 31.0 41.0 18 35.68445651422806 36.0 34.0 39.0 31.0 41.0 19 35.57230454551736 36.0 34.0 40.0 30.0 41.0 20 35.38244648064458 35.0 34.0 40.0 30.0 41.0 21 35.157403430214075 35.0 34.0 39.0 29.0 41.0 22 35.045919814254326 35.0 34.0 39.0 29.0 41.0 23 35.057790953190434 35.0 34.0 39.0 29.0 41.0 24 34.90450433268378 35.0 34.0 39.0 29.0 41.0 25 34.88973478723551 35.0 34.0 39.0 29.0 41.0 26 34.735306051936924 35.0 34.0 39.0 29.0 41.0 27 34.63268681675581 35.0 34.0 39.0 29.0 41.0 28 34.78031897397626 35.0 34.0 39.0 29.0 41.0 29 34.86459748192988 35.0 34.0 39.0 29.0 41.0 30 34.811220752656965 35.0 34.0 39.0 29.0 41.0 31 34.5942230882983 35.0 34.0 39.0 29.0 41.0 32 34.390390148845306 35.0 34.0 39.0 28.0 41.0 33 34.199492792680736 35.0 33.0 39.0 27.0 41.0 34 34.09626933123264 35.0 33.0 39.0 27.0 41.0 35 33.91146260900811 35.0 33.0 39.0 25.0 41.0 36 33.620423455919955 35.0 33.0 38.0 23.0 41.0 37 33.43398814212861 35.0 33.0 38.0 23.0 41.0 38 33.59253423994914 35.0 33.0 38.0 24.0 41.0 39 33.647527122462236 35.0 33.0 38.0 24.0 41.0 40 33.42839531766104 35.0 32.0 38.0 23.0 41.0 41 33.54334701549263 35.0 33.0 38.0 23.0 41.0 42 33.504998272454635 35.0 33.0 38.0 23.0 41.0 43 33.33568832317537 35.0 33.0 38.0 23.0 41.0 44 33.328455298036125 35.0 33.0 38.0 23.0 40.0 45 33.266569647718946 35.0 32.0 38.0 23.0 40.0 46 33.23749215694404 35.0 32.0 38.0 23.0 40.0 47 33.25469823237558 35.0 32.0 38.0 23.0 40.0 48 33.30653786088423 35.0 33.0 38.0 23.0 40.0 49 33.36215514739417 35.0 33.0 38.0 24.0 40.0 50 33.08953052227152 35.0 32.0 38.0 24.0 40.0 51 32.86376217919483 35.0 32.0 37.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 0.0 11 3.0 12 6.0 13 12.0 14 34.0 15 130.0 16 382.0 17 1121.0 18 2543.0 19 4880.0 20 8407.0 21 13429.0 22 19621.0 23 28268.0 24 39607.0 25 53729.0 26 68421.0 27 80976.0 28 91686.0 29 105327.0 30 126586.0 31 156214.0 32 197592.0 33 262767.0 34 468719.0 35 704716.0 36 207022.0 37 228005.0 38 304553.0 39 442635.0 40 457.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.073565791837694 24.7291899885291 29.854858548585483 14.342385671047722 2 29.251959036444298 26.414997857843748 31.638818635377362 12.694224470334593 3 27.150904542753292 26.542587448346396 32.82236687535415 13.484141133546167 4 23.911687880923754 29.030169852260318 32.358693699296545 14.699448567519383 5 22.442914990947664 32.58902386776677 31.69293917658278 13.275121964702793 6 20.59430324640325 40.674571914258465 27.952789640255954 10.778335199082328 7 86.45543623975566 5.648658733778349 5.986069074173888 1.9098359522921073 8 88.99238498002957 3.7047141257929432 5.509377116243073 1.7935237779344086 9 86.38307281949224 4.386279143690313 6.944234835606783 2.2864132012106637 10 64.39758420056111 17.441159804856476 10.844838785466507 7.316417209115911 11 59.97434940641541 15.399560512459058 16.034495625855136 8.591594455270396 12 53.29565902400597 19.76306369805271 18.35518332711417 8.586093950827149 13 18.660143455367137 54.254156474149006 18.132979532042512 8.952720538441339 14 10.631784070649696 54.697320231629284 24.20788589908371 10.463009798637312 15 8.545545006011858 21.52242353884213 59.51775225617425 10.414279198971766 16 10.065840208963888 14.894702654891717 57.3789128902525 17.660544245891895 17 10.596459223019195 15.532512403775723 28.26347139875893 45.60755697444615 18 17.642964744254183 20.94158132592562 42.60408806335254 18.811365866467654 19 33.95773733018229 20.681592658623217 24.791630388213996 20.5690396229805 20 35.55777602719847 20.485481708749674 24.931160772281878 19.025581491769973 21 18.44739278853463 33.79482289204915 28.847934546761202 18.90984977265503 22 20.799010462014735 24.133255939300966 20.69071409815222 34.377019500532086 23 13.771300634354658 35.27280014373177 23.115496772945257 27.84040244896831 24 14.584850118164102 20.92300675815747 50.42013903285101 14.072004090827425 25 11.246126843290904 23.70764404273256 45.52651436626726 19.519714747709273 26 11.33548930994928 41.7999640670564 26.88102049559821 19.983526127396107 27 12.460079881697693 46.446066033694045 25.744765537543017 15.349088547065245 28 9.637491880536784 32.36104316099341 43.403983028594325 14.597481929875478 29 9.69993228022168 23.862819077628977 42.90669872990865 23.530549912240694 30 14.804649170087206 39.21483754163385 30.485398786572137 15.495114501706814 31 33.70775460563594 28.139834432052186 23.202592700084303 14.949818262227566 32 36.48907500310958 22.836795334245476 26.223585831363934 14.45054383128101 33 34.65602498721616 26.723164310294788 20.973782771535582 17.647027930953467 34 17.78177646945009 25.980292162472185 25.69476346448858 30.543167903589147 35 17.338640352695663 23.79742112027862 35.66610003178683 23.197838495238884 36 37.978965407631605 23.038434429288113 23.678538358417292 15.304061804662991 37 17.096784001547878 39.85405696753597 28.45797918653344 14.591179844382712 38 16.54369307738021 40.35167295493179 22.02059234075487 21.08404162693312 39 18.33436986055254 38.591953784706384 25.72326105283525 17.350415301905826 40 27.579805685697306 23.023259670798954 24.283649128626116 25.11328551487762 41 13.605428638556049 22.001824287905798 27.235374600937018 37.15737247260113 42 18.072114653730807 21.4178863136946 24.611191729894827 35.89880730267977 43 18.8247716185027 22.396312727172216 27.197036914189365 31.581878740135714 44 14.778031151098029 30.25813673867076 32.90924167668643 22.054590433544785 45 12.66116616222342 48.503696947081835 19.32446066033694 19.51067623035781 46 20.48426551681247 40.121038738477274 22.901806321434 16.492889423276257 47 18.657821634396118 28.46289923573393 25.08097350636428 27.798305623505676 48 20.40413505258648 23.861271196981633 36.77054051439391 18.964053236037977 49 21.772765592824467 22.68703788161477 37.20389181419904 18.33630471136172 50 18.74806860428155 40.83215169230344 23.936067001119447 16.483712702295563 51 15.538759207816796 39.4583799770582 22.401315698550246 22.601545116574762 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 16498.0 1 13309.5 2 10121.0 3 15922.5 4 21724.0 5 16131.0 6 10538.0 7 11431.5 8 12325.0 9 13944.5 10 15564.0 11 16901.0 12 18238.0 13 18130.0 14 18022.0 15 17013.0 16 16004.0 17 15321.0 18 14638.0 19 12807.0 20 10976.0 21 11123.0 22 11270.0 23 11517.5 24 11765.0 25 11686.0 26 16477.5 27 21348.0 28 25949.5 29 30551.0 30 35186.5 31 39822.0 32 51206.5 33 62591.0 34 76912.0 35 91233.0 36 96444.5 37 101656.0 38 134484.5 39 167313.0 40 264784.5 41 362256.0 42 441497.0 43 520738.0 44 517723.5 45 514709.0 46 452816.5 47 390924.0 48 357299.0 49 323674.0 50 282073.0 51 240472.0 52 197906.0 53 155340.0 54 127118.5 55 98897.0 56 83894.0 57 68891.0 58 65840.5 59 62790.0 60 55561.0 61 48332.0 62 43180.0 63 38028.0 64 34106.0 65 30184.0 66 24491.0 67 18798.0 68 14804.5 69 10811.0 70 9166.5 71 7522.0 72 6773.5 73 6025.0 74 4398.0 75 2295.0 76 1819.0 77 1145.5 78 472.0 79 329.5 80 187.0 81 270.0 82 353.0 83 195.0 84 37.0 85 24.0 86 11.0 87 6.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3617850.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.079229889804592 #Duplication Level Percentage of deduplicated Percentage of total 1 77.3542438096833 10.890881815485251 2 9.514964815892197 2.6792675407269697 3 3.6560545770757353 1.5442329864096476 4 1.9487318118402295 1.0974657268989607 5 1.1633352646744344 0.8189432315134016 6 0.8219170788770949 0.6943175702320366 7 0.5848266892427192 0.576373658247909 8 0.4291714155925023 0.48339224178077667 9 0.3320663378623941 0.4207714478487153 >10 2.1083520816208168 6.079404733060775 >50 0.6061662506521319 6.208599522861266 >100 1.171843554227057 35.94460237339605 >500 0.28024114367635666 25.85784370538102 >1k 0.02747462192905457 5.571805802673509 >5k 0.0 0.0 >10k+ 6.105471539789905E-4 1.1320976434837384 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 15200 0.4201390328510027 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12343 0.3411694791105215 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11967 0.33077656619262824 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4782 0.13217795099299307 No Hit GGATATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 4071 0.11252539491687051 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.76407258454607E-5 0.0 0.0 0.07847202067526293 0.0 2 2.76407258454607E-5 0.0 0.0 0.2605138410934671 0.0 3 2.76407258454607E-5 0.0 0.0 0.35236397307793305 0.0 4 2.76407258454607E-5 0.0 0.0 0.4651104938015672 0.0 5 2.76407258454607E-5 0.0 0.0 0.7887833934519121 0.0 6 2.76407258454607E-5 0.0 0.0 1.0459527067180785 0.0 7 2.76407258454607E-5 0.0 0.0 1.258261121937062 0.0 8 2.76407258454607E-5 0.0 0.0 1.761571098857056 0.0 9 2.76407258454607E-5 0.0 0.0 1.9337175394225852 0.0 10 2.76407258454607E-5 0.0 0.0 2.2288099285487237 0.0 11 2.76407258454607E-5 0.0 0.0 2.5291264148596544 0.0 12 2.76407258454607E-5 0.0 0.0 2.8024379120195695 0.0 13 8.292217753638211E-5 0.0 0.0 2.9045427532927013 0.0 14 8.292217753638211E-5 0.0 0.0 2.935942617853145 0.0 15 8.292217753638211E-5 0.0 0.0 2.9967245739873127 0.0 16 8.292217753638211E-5 0.0 0.0 3.1425017620962725 0.0 17 8.292217753638211E-5 0.0 0.0 3.313100322014456 0.0 18 1.105629033818428E-4 0.0 0.0 3.617811683734815 0.0 19 1.105629033818428E-4 0.0 0.0 3.712978702820736 0.0 20 1.382036292273035E-4 0.0 0.0 3.8118772198957944 0.0 21 1.382036292273035E-4 0.0 0.0 3.960833091476982 0.0 22 1.382036292273035E-4 0.0 0.0 4.1034039553878685 0.0 23 1.382036292273035E-4 0.0 0.0 4.2922177536382105 0.0 24 1.6584435507276422E-4 0.0 0.0 4.418701715107039 0.0 25 1.9348508091822491E-4 0.0 0.0 4.518899346296834 0.0 26 1.9348508091822491E-4 0.0 0.0 4.637118730737869 0.0 27 1.9348508091822491E-4 0.0 0.0 4.732893845792391 0.0 28 2.211258067636856E-4 0.0 0.0 4.8343905910969225 0.0 29 2.211258067636856E-4 0.0 0.0 4.94766228561162 0.0 30 2.211258067636856E-4 0.0 0.0 5.129980513288279 0.0 31 2.211258067636856E-4 0.0 0.0 5.296681730862252 0.0 32 2.211258067636856E-4 0.0 0.0 5.422308829829872 0.0 33 2.211258067636856E-4 0.0 0.0 5.545310059842172 0.0 34 2.4876653260914633E-4 0.0 0.0 5.686775294719239 0.0 35 2.4876653260914633E-4 0.0 0.0 5.910167641002253 0.0 36 2.76407258454607E-4 0.0 0.0 6.058736542421604 0.0 37 2.76407258454607E-4 0.0 0.0 6.200865154718963 0.0 38 2.76407258454607E-4 0.0 0.0 6.3379355141866025 0.0 39 2.76407258454607E-4 0.0 0.0 6.479677156322125 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTTA 40 6.8212103E-9 45.000004 37 TGAACGT 20 7.035297E-4 45.000004 44 CGGGTAT 490 0.0 45.0 6 GCGCGTT 35 1.2129021E-7 45.0 15 TAGACGT 45 3.8562575E-10 45.0 3 GACGTAG 110 0.0 45.0 1 TCGATTG 190 0.0 45.0 1 CGCGACA 25 3.892473E-5 45.0 29 ATCACGC 25 3.892473E-5 45.0 38 GCCGAAT 50 2.1827873E-11 45.0 29 ATGACCG 95 0.0 45.0 18 ACGCTAT 45 3.8562575E-10 45.0 45 ACATCGC 55 1.8189894E-12 45.0 32 GTGCGTA 25 3.892473E-5 45.0 16 TGTCGGT 35 1.2129021E-7 45.0 12 TACCGGC 25 3.892473E-5 45.0 25 CCCGTGC 30 2.1668002E-6 44.999996 42 GTGCTAC 30 2.1668002E-6 44.999996 2 AGTCGAC 30 2.1668002E-6 44.999996 14 CGATATC 240 0.0 44.062496 10 >>END_MODULE