SRR1545236_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545236_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3812529
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19438	0.5098453021603245	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7918	0.20768366614391653	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	5355	0.14045794799200217	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4989	0.13085802101439753	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGCGA	3320	40.527107	6
ACGGGCT	890	40.44944	5
CAATTCG	85	39.705883	13
GGGCGAT	5980	39.469067	7
CGGTCTA	395	39.303795	31
GCTACGA	735	39.183674	10
AGTACGG	575	39.130436	2
CGTTTTT	13650	38.983517	1
AAGGGCG	1690	38.87574	5
AGGGTAC	1480	38.76689	6
AACGGGA	890	38.679775	4
CGTAAGG	660	38.522728	2
GGGTACC	1915	38.420364	7
GTAGGGC	1490	37.75168	4
ACGGGAC	835	37.724552	5
CTACGAA	765	37.647057	11
GCGCGAC	1910	37.578533	9
GGCGATT	1955	37.51918	8
CGTATGG	350	37.285713	2
ACCCGCT	1830	37.13115	34