##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545236_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3812529 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20574610711158 31.0 31.0 33.0 30.0 34.0 2 31.47681211080624 31.0 31.0 34.0 30.0 34.0 3 31.571200114149953 31.0 31.0 34.0 30.0 34.0 4 35.33796778988435 37.0 35.0 37.0 33.0 37.0 5 35.18918492160978 37.0 35.0 37.0 32.0 37.0 6 35.19477622334151 37.0 35.0 37.0 32.0 37.0 7 35.83650537477879 37.0 35.0 37.0 35.0 37.0 8 35.912431879206686 37.0 35.0 37.0 35.0 37.0 9 37.533330762861084 39.0 37.0 39.0 35.0 39.0 10 36.73988788019711 39.0 37.0 39.0 32.0 39.0 11 36.45137623871189 38.0 35.0 39.0 32.0 39.0 12 35.76897513435308 37.0 35.0 39.0 31.0 39.0 13 35.47973195744872 37.0 35.0 39.0 30.0 39.0 14 36.31862183867978 38.0 35.0 40.0 30.0 41.0 15 36.66920776209178 38.0 35.0 40.0 31.0 41.0 16 36.53477599776946 38.0 35.0 40.0 31.0 41.0 17 36.57446985977025 38.0 35.0 40.0 31.0 41.0 18 36.63812498213128 38.0 35.0 40.0 31.0 41.0 19 36.57861068073187 38.0 35.0 40.0 31.0 41.0 20 36.47029517677112 38.0 35.0 40.0 31.0 41.0 21 36.358884614385886 38.0 35.0 40.0 31.0 41.0 22 36.23650102071355 38.0 35.0 40.0 30.0 41.0 23 36.15185825471754 38.0 34.0 40.0 30.0 41.0 24 35.95661331362987 37.0 34.0 40.0 30.0 41.0 25 35.90101504801668 37.0 34.0 40.0 30.0 41.0 26 35.76413425314273 37.0 34.0 40.0 30.0 41.0 27 35.771160035766286 37.0 34.0 40.0 30.0 41.0 28 35.77705087620317 37.0 34.0 40.0 30.0 41.0 29 35.729147502878014 37.0 34.0 40.0 30.0 41.0 30 35.63345144391033 37.0 34.0 40.0 29.0 41.0 31 35.54659912095095 37.0 34.0 40.0 29.0 41.0 32 35.423397172847736 37.0 34.0 40.0 29.0 41.0 33 35.24388955467617 37.0 34.0 40.0 27.0 41.0 34 35.07582053802083 37.0 34.0 40.0 27.0 41.0 35 34.94235715977505 37.0 34.0 40.0 27.0 41.0 36 34.74281323499441 36.0 33.0 40.0 25.0 41.0 37 34.57801343937318 36.0 33.0 40.0 25.0 41.0 38 34.60381652178908 36.0 33.0 40.0 25.0 41.0 39 34.594550493910994 36.0 33.0 40.0 25.0 41.0 40 34.433851126116025 36.0 33.0 40.0 24.0 41.0 41 34.41070113827331 36.0 33.0 40.0 24.0 41.0 42 34.337957035867795 36.0 33.0 40.0 24.0 41.0 43 34.20844169316483 35.0 33.0 40.0 24.0 41.0 44 34.14668609733854 35.0 33.0 40.0 24.0 41.0 45 34.08622544248188 35.0 33.0 40.0 23.0 41.0 46 33.99729365993019 35.0 33.0 40.0 23.0 41.0 47 34.01433956305644 35.0 33.0 40.0 23.0 41.0 48 33.97891714397451 35.0 33.0 40.0 23.0 41.0 49 33.952425279912624 35.0 33.0 39.0 24.0 41.0 50 33.771413148595066 35.0 33.0 39.0 24.0 41.0 51 33.59424754539572 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 4.0 12 8.0 13 24.0 14 46.0 15 126.0 16 366.0 17 946.0 18 2100.0 19 3946.0 20 7097.0 21 11258.0 22 16920.0 23 24152.0 24 34419.0 25 47222.0 26 61361.0 27 73485.0 28 84079.0 29 97170.0 30 116580.0 31 141745.0 32 176217.0 33 226941.0 34 357946.0 35 496662.0 36 295122.0 37 359819.0 38 487430.0 39 688866.0 40 469.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.03619251158483 23.981325781390776 26.712452547901933 14.27002915912246 2 32.69428245660558 25.412737844092465 28.826718432830283 13.06626126647168 3 29.808612603340194 26.145112601110704 30.865129157050347 13.181145638498752 4 26.830720500748978 28.09646824981528 29.532234377758176 15.540576871677567 5 22.720246849269866 32.75665575265133 29.342675163913505 15.1804222341653 6 21.58732431936911 41.48057627889519 26.547548884218326 10.384550517517376 7 86.68542586823602 4.826691154349253 6.66654601184673 1.8213369655679996 8 87.6059434564301 4.076139486414398 6.4945342055103055 1.823382851645194 9 82.77715395738629 5.879535604843924 8.296382794727593 3.0469276430421908 10 46.67167121876319 26.09268021305543 14.950050216011471 12.285598352169911 11 39.581521871702485 23.799005856742337 21.989419621463863 14.630052650091319 12 36.493650277807724 22.6608112357965 25.942622338085826 14.902916148309952 13 22.083058253458532 36.85705734959656 24.67131397557894 16.388570421365976 14 16.635335757446043 38.4272486845346 27.82885061333304 17.10856494468632 15 15.739919617660615 25.06651096949033 42.734206087350415 16.45936332549864 16 17.983758287477944 20.69969828426223 41.54326432664512 19.7732791016147 17 17.265311293369834 21.300428141005618 29.914316717328575 31.519943848295974 18 20.370022103438426 24.507800465255478 34.257680400594985 20.86449703071111 19 28.80284976192968 25.169539693993148 26.0867523892933 19.94085815478387 20 30.99934452957604 23.36517309114239 26.41383186855759 19.221650510723983 21 23.237777338874015 28.99267126886117 27.5450757227027 20.22447566956212 22 22.34789558322048 25.478730784736324 24.962721595035735 27.210652037007456 23 20.621692320242026 30.219704558312866 26.11670625980812 23.04189686163699 24 19.850471957065768 24.29940860777715 37.920524670107426 17.929594765049657 25 19.209375194260815 26.516834363751723 34.19024484797362 20.083545594013845 26 18.18226169558317 33.618052479076226 27.07134817859746 21.128337646743145 27 18.065488813330994 34.10667827051283 27.814424493557947 20.01340842259823 28 17.521125740945184 28.87839017093378 35.236453283371745 18.364030804749287 29 17.91545716767007 25.858688550303487 34.33754864553161 21.88830563649483 30 19.932412317388273 31.542081384823568 29.589335582758846 18.936170715029316 31 27.806345866483902 28.153097327259673 25.605339657744242 18.43521714851218 32 29.331999835279944 26.02409057085205 26.571312637884198 18.072596955983812 33 28.186303632051064 27.241497704017466 24.704703885531103 19.867494778400374 34 20.14536807457727 27.367345927073604 27.01094208070286 25.476343917646265 35 21.191891261679583 26.242397107012174 30.149541157588573 22.416170473719678 36 27.91084343227291 28.477894856668627 24.870892785340125 18.740368925718336 37 20.999184530793077 34.088134149274666 27.006220805140106 17.90646051479215 38 20.605272773007105 34.16029097745879 24.982288659312495 20.252147590221607 39 21.489226704898506 32.99909325279886 25.29955837712972 20.21212166517291 40 24.594435871832058 26.20635803688313 27.606085094696986 21.593120996587828 41 18.174760113300124 25.858163964129847 28.68334903157458 27.283726890995453 42 20.284540786443852 27.170888405045574 25.268529104958937 27.276041703551634 43 20.537207716977367 26.602682891067847 26.884595500781767 25.975513891173023 44 19.34122992900513 29.578476648964507 29.752245818982626 21.32804760304774 45 18.409827177708024 36.309861511873095 24.53284945504677 20.747461855372116 46 20.68207218882794 33.907178148677694 25.58383162462502 19.82691803786935 47 20.32076346173367 29.1621912908728 27.178967032119623 23.338078215273903 48 20.304265226572703 27.245589476171855 31.496285011864828 20.953860285390615 49 21.1163246233668 28.00031160418714 30.99040033531548 19.892963437130575 50 19.478960028894207 33.88427996219832 26.9036117495762 19.733148259331273 51 18.710887182759787 32.412684598595845 26.802287930137712 22.07414028850666 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8962.0 1 8945.5 2 8929.0 3 21385.5 4 33842.0 5 24411.5 6 14981.0 7 14935.5 8 14890.0 9 15584.0 10 16278.0 11 16973.0 12 17668.0 13 17960.0 14 18252.0 15 17645.5 16 17039.0 17 16360.5 18 15682.0 19 15534.5 20 15387.0 21 16574.0 22 17761.0 23 19846.0 24 21931.0 25 23836.0 26 34260.0 27 42779.0 28 49156.0 29 55533.0 30 67951.0 31 80369.0 32 93655.5 33 106942.0 34 119849.0 35 132756.0 36 138096.5 37 143437.0 38 153058.5 39 162680.0 40 214375.5 41 266071.0 42 301507.0 43 336943.0 44 342367.5 45 347792.0 46 329580.5 47 311369.0 48 292519.0 49 273669.0 50 252698.5 51 231728.0 52 208076.0 53 184424.0 54 167655.5 55 150887.0 56 145222.0 57 139557.0 58 136089.0 59 132621.0 60 127481.0 61 122341.0 62 110702.5 63 99064.0 64 86601.5 65 74139.0 66 62367.0 67 50595.0 68 44708.0 69 38821.0 70 33824.5 71 28828.0 72 25758.0 73 22688.0 74 17911.5 75 10427.0 76 7719.0 77 6036.5 78 4354.0 79 3203.0 80 2052.0 81 1566.5 82 1081.0 83 818.5 84 556.0 85 333.0 86 110.0 87 96.0 88 82.0 89 54.0 90 26.0 91 26.0 92 26.0 93 14.0 94 2.0 95 3.5 96 5.0 97 5.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3812529.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.35012033626535 #Duplication Level Percentage of deduplicated Percentage of total 1 78.76990862755092 12.878974849370836 2 7.2636050768780684 2.3752163416412864 3 2.459197917594381 1.2062454565008385 4 1.436522215124185 0.9394924433199552 5 0.8887787590657507 0.7265819831520806 6 0.6907599454552777 0.6776404938999528 7 0.5063217135371788 0.579489466163786 8 0.4256529961319806 0.5567582166599817 9 0.34723201808111864 0.5109556752207499 >10 4.268397932622311 16.942962579546837 >50 1.6326738921901067 19.016533115543492 >100 1.286736942150812 39.38182622477043 >500 0.019071067233320044 1.9966686199191435 >1k 0.0046433902828953155 1.3237192523588397 >5k 3.316707344925225E-4 0.3598878663776911 >10k+ 1.6583536724626126E-4 0.5270474155540992 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19438 0.5098453021603245 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7918 0.20768366614391653 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5355 0.14045794799200217 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4989 0.13085802101439753 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.622930868197986E-5 0.0 0.0 0.01568512659182396 0.0 2 2.622930868197986E-5 0.0 0.0 0.05201271911636607 0.0 3 2.622930868197986E-5 0.0 0.0 0.0802354552581764 0.0 4 2.622930868197986E-5 0.0 0.0 0.1111073515768667 0.0 5 2.622930868197986E-5 0.0 0.0 0.20012962524350633 0.0 6 2.622930868197986E-5 0.0 0.0 0.3153025196660799 0.0 7 2.622930868197986E-5 0.0 0.0 0.3892167115318992 0.0 8 2.622930868197986E-5 0.0 0.0 0.5839693284955997 0.0 9 2.622930868197986E-5 0.0 0.0 0.6762178071301228 0.0 10 2.622930868197986E-5 0.0 0.0 0.8264330579518214 0.0 11 2.622930868197986E-5 0.0 0.0 0.9545370015546111 0.0 12 2.622930868197986E-5 0.0 0.0 1.065303372118612 0.0 13 2.622930868197986E-5 0.0 0.0 1.1141161155757766 0.0 14 5.245861736395972E-5 0.0 0.0 1.1343126832609012 0.0 15 5.245861736395972E-5 0.0 0.0 1.1620632918464358 0.0 16 5.245861736395972E-5 0.0 0.0 1.2207644846767067 0.0 17 5.245861736395972E-5 0.0 0.0 1.2925541025392857 0.0 18 5.245861736395972E-5 0.0 0.0 1.4021401542125975 0.0 19 5.245861736395972E-5 0.0 0.0 1.4510840442131718 0.0 20 1.0491723472791945E-4 0.0 0.0 1.5066901786189693 0.0 21 1.0491723472791945E-4 0.0 0.0 1.577404394825587 0.0 22 1.0491723472791945E-4 0.0 0.0 1.6564857605017562 0.0 23 1.0491723472791945E-4 0.0 0.0 1.7502817683485161 0.0 24 1.311465434098993E-4 0.0 0.0 1.8232779344104662 0.0 25 1.8360516077385903E-4 0.0 0.0 1.8847856632697089 0.0 26 1.8360516077385903E-4 0.0 0.0 1.9440639008909835 0.0 27 1.8360516077385903E-4 0.0 0.0 2.0052568780460422 0.0 28 1.8360516077385903E-4 0.0 0.0 2.072141615185091 0.0 29 2.098344694558389E-4 0.0 0.0 2.150645936070257 0.0 30 2.098344694558389E-4 0.0 0.0 2.2578451206535086 0.0 31 2.098344694558389E-4 0.0 0.0 2.3465788719246463 0.0 32 2.098344694558389E-4 0.0 0.0 2.434263450848505 0.0 33 2.098344694558389E-4 0.0 0.0 2.522997202119643 0.0 34 2.098344694558389E-4 0.0 0.0 2.6144325721850246 0.0 35 2.098344694558389E-4 0.0 0.0 2.7369759023472344 0.0 36 2.098344694558389E-4 0.0 0.0 2.836909568425578 0.0 37 2.098344694558389E-4 0.0 0.0 2.936948151738649 0.0 38 2.098344694558389E-4 0.0 0.0 3.0420489916273423 0.0 39 2.098344694558389E-4 0.0 0.0 3.1528415915000254 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGGCGA 3320 0.0 40.527107 6 ACGGGCT 890 0.0 40.44944 5 CAATTCG 85 0.0 39.705883 13 GGGCGAT 5980 0.0 39.469067 7 CGGTCTA 395 0.0 39.303795 31 GCTACGA 735 0.0 39.183674 10 AGTACGG 575 0.0 39.130436 2 CGTTTTT 13650 0.0 38.983517 1 AAGGGCG 1690 0.0 38.87574 5 AGGGTAC 1480 0.0 38.76689 6 AACGGGA 890 0.0 38.679775 4 CGTAAGG 660 0.0 38.522728 2 GGGTACC 1915 0.0 38.420364 7 GTAGGGC 1490 0.0 37.75168 4 ACGGGAC 835 0.0 37.724552 5 CTACGAA 765 0.0 37.647057 11 GCGCGAC 1910 0.0 37.578533 9 GGCGATT 1955 0.0 37.51918 8 CGTATGG 350 0.0 37.285713 2 ACCCGCT 1830 0.0 37.13115 34 >>END_MODULE