##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545234_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1543900 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.202694475030768 31.0 31.0 33.0 30.0 34.0 2 31.44555282077855 31.0 31.0 34.0 30.0 34.0 3 31.529870457931214 31.0 31.0 34.0 30.0 34.0 4 35.27608977265367 37.0 35.0 37.0 33.0 37.0 5 35.12465120797979 37.0 35.0 37.0 32.0 37.0 6 35.11500550553792 37.0 35.0 37.0 32.0 37.0 7 35.801882246259474 37.0 35.0 37.0 35.0 37.0 8 35.92024807306173 37.0 35.0 37.0 35.0 37.0 9 37.594986074227606 39.0 37.0 39.0 35.0 39.0 10 36.817699332858346 39.0 37.0 39.0 32.0 39.0 11 36.405465379882116 38.0 35.0 39.0 32.0 39.0 12 35.10539866571669 35.0 35.0 39.0 30.0 39.0 13 34.47517779648941 35.0 33.0 39.0 26.0 39.0 14 35.15421270807695 36.0 33.0 40.0 25.0 41.0 15 35.748683852581124 36.0 34.0 40.0 30.0 41.0 16 35.78599132068139 36.0 34.0 40.0 31.0 41.0 17 35.861132197681194 36.0 34.0 40.0 31.0 41.0 18 35.9571222229419 36.0 35.0 40.0 31.0 41.0 19 35.862244964052074 36.0 34.0 40.0 30.0 41.0 20 35.64211477427295 36.0 34.0 40.0 30.0 41.0 21 35.48602564932962 35.0 34.0 40.0 30.0 41.0 22 35.36817345683011 35.0 34.0 40.0 30.0 41.0 23 35.306190815467325 35.0 34.0 40.0 29.0 41.0 24 35.19426258177343 35.0 34.0 40.0 29.0 41.0 25 35.21650430727379 35.0 34.0 40.0 29.0 41.0 26 35.05227411101755 35.0 34.0 40.0 29.0 41.0 27 34.96629315370166 35.0 34.0 40.0 29.0 41.0 28 35.06499125591036 36.0 34.0 40.0 29.0 41.0 29 35.11880950838785 36.0 34.0 40.0 29.0 41.0 30 35.05378651467064 36.0 34.0 40.0 29.0 41.0 31 34.87321199559557 35.0 34.0 40.0 29.0 41.0 32 34.6590284344841 35.0 34.0 40.0 27.0 41.0 33 34.42746550942419 35.0 33.0 40.0 27.0 41.0 34 34.25072867413692 35.0 33.0 40.0 26.0 41.0 35 34.08910033033227 35.0 33.0 40.0 25.0 41.0 36 33.81795841699592 35.0 33.0 39.0 23.0 41.0 37 33.64451065483516 35.0 33.0 39.0 23.0 41.0 38 33.74032191204093 35.0 33.0 39.0 23.0 41.0 39 33.751822656907834 35.0 33.0 39.0 23.0 41.0 40 33.594031349180646 35.0 33.0 39.0 23.0 41.0 41 33.65889630157394 35.0 33.0 39.0 23.0 41.0 42 33.60812746939568 35.0 33.0 39.0 23.0 41.0 43 33.450417773171836 35.0 33.0 39.0 23.0 41.0 44 33.45738130707947 35.0 33.0 39.0 23.0 41.0 45 33.38200012954207 35.0 32.0 39.0 23.0 41.0 46 33.34482414664162 35.0 32.0 39.0 23.0 41.0 47 33.375202409482476 35.0 32.0 39.0 23.0 41.0 48 33.41350281754 35.0 33.0 38.0 23.0 41.0 49 33.4363805945981 35.0 32.0 38.0 24.0 40.0 50 33.13315240624393 35.0 32.0 38.0 23.0 40.0 51 32.97552820778548 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 0.0 12 1.0 13 5.0 14 23.0 15 50.0 16 138.0 17 455.0 18 953.0 19 1937.0 20 3586.0 21 5865.0 22 9086.0 23 12870.0 24 17690.0 25 23381.0 26 29319.0 27 33734.0 28 37793.0 29 43372.0 30 51232.0 31 63126.0 32 79603.0 33 104478.0 34 180147.0 35 268771.0 36 95924.0 37 111706.0 38 152127.0 39 216368.0 40 157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.86566487466805 23.742081741045403 28.745579376902647 13.646674007383897 2 30.138739555670703 26.766889047218083 29.949089966966774 13.14528143014444 3 28.61856337845715 26.505214068268668 31.28473346719347 13.591489086080704 4 25.270937236867674 27.287194766500424 32.716626724528794 14.725241272103116 5 23.692790983872012 32.132845391540904 29.429043331822008 14.745320292765077 6 20.025260703413434 42.36569726018525 27.70185892868709 9.90718310771423 7 85.5729645702442 5.227670185892869 7.452490446272426 1.7468747975905177 8 88.05453721095927 4.22579182589546 6.107908543299437 1.611762419845845 9 84.69926808731135 4.460975451777965 7.349439730552497 3.4903167303581837 10 60.242178897597 19.263553338946824 11.677958416995919 8.816309346460264 11 55.328000518168274 17.848694863656974 16.397953235313167 10.425351382861585 12 47.5413563054602 21.289008355463437 19.879784960165814 11.289850378910552 13 20.57205777576268 48.01956085238681 20.49517455793769 10.913206813912819 14 12.71150981281171 50.078243409547255 26.139646350152212 11.070600427488827 15 11.767212902390051 21.445689487661117 55.26640326446013 11.520694345488698 16 13.039445559945593 15.96495887039316 52.35779519398924 18.637800375672 17 13.45158365179092 16.545825506833346 29.266403264460134 40.736187576915604 18 19.30591359544012 21.157652697713583 39.47308763520954 20.063346071636765 19 33.27313945203705 20.9606192110888 25.733985361746225 20.03225597512792 20 36.09262257918259 21.2667271196321 24.69764881145152 17.94300148973379 21 20.945333246971952 31.5383768378781 28.217954530733856 19.29833538441609 22 21.16296392253384 24.369648293283245 23.58682557160438 30.880562212578532 23 17.3445171319386 33.23259278450677 24.757238163093465 24.66565192046117 24 16.14495757497247 22.140812228771292 46.092687350216984 15.621542846039253 25 14.071377679901548 24.831336226439536 42.69421594662867 18.40307014703025 26 13.994624004145345 38.50663903102532 27.881663320163224 19.617073644666107 27 15.65710214392124 40.7224561176242 27.648876222553277 15.97156551590129 28 12.58948118401451 30.88529049808925 41.66584623356435 14.859382084331887 29 13.508452619988343 24.622320098451972 40.44407021180128 21.425157069758406 30 17.480277220027205 35.9685212772848 29.927974609754514 16.62322689293348 31 32.350346525034006 27.494267763456183 24.173197745968004 15.982187965541812 32 36.71798691625106 22.891314204287845 26.171708012176953 14.21899086728415 33 33.643953623939375 25.51732625170024 22.944232139387267 17.89448798497312 34 19.8887881339465 25.528920266856662 26.806593691301252 27.77569790789559 35 20.704449770062826 23.79260314787227 33.81585594921951 21.68709113284539 36 35.929529114579964 25.17391022734633 23.460392512468424 15.436168145605286 37 20.073191268864562 37.53546214133039 26.994559233110955 15.396787356694086 38 19.0108167627437 38.43053306561306 21.975646091068075 20.58300408057517 39 21.4379817345683 36.62309735086469 24.601139970205324 17.33778094436168 40 27.558326316471277 23.685342314916767 23.69181941835611 25.064511950255845 41 15.638124230843967 23.077530928168922 26.498024483450997 34.78632035753611 42 20.151434678411814 22.892285769803745 24.944037826284085 32.01224172550036 43 19.61551913984066 23.642852516354687 27.174298853552692 29.567329490251957 44 16.895200466351447 29.91404883735993 32.277867737547766 20.91288295874085 45 15.25176501068722 43.100654187447375 22.1102403005376 19.537340501327808 46 20.456765334542393 37.52179545307339 24.156551590128895 17.864887622255328 47 19.87175335190103 28.111989118466223 25.472439924865597 26.54381760476715 48 20.945462789040743 24.193147224561177 35.28000518168275 19.58138480471533 49 21.680484487337264 23.905628602888786 36.17999870457931 18.23388820519464 50 19.01910745514606 38.91009780426194 24.503141395168083 17.567653345423924 51 17.249174169311484 37.26782822721679 24.222682816244575 21.260314787227152 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3928.0 1 3612.0 2 3296.0 3 6826.0 4 10356.0 5 7681.0 6 5006.0 7 5295.0 8 5584.0 9 6127.0 10 6670.0 11 7173.5 12 7677.0 13 7518.5 14 7360.0 15 7284.5 16 7209.0 17 6480.0 18 5751.0 19 5626.0 20 5501.0 21 5917.0 22 6333.0 23 5652.5 24 4972.0 25 7129.0 26 9829.5 27 10373.0 28 12766.5 29 15160.0 30 16460.0 31 17760.0 32 23751.0 33 29742.0 34 33899.0 35 38056.0 36 43288.5 37 48521.0 38 62648.5 39 76776.0 40 107060.0 41 137344.0 42 162858.5 43 188373.0 44 187759.5 45 187146.0 46 168242.5 47 149339.0 48 135560.0 49 121781.0 50 110216.0 51 98651.0 52 89292.0 53 79933.0 54 69553.0 55 59173.0 56 52919.5 57 46666.0 58 43970.0 59 41274.0 60 37106.0 61 32938.0 62 28460.5 63 23983.0 64 21178.5 65 18374.0 66 15176.5 67 11979.0 68 10119.5 69 8260.0 70 7190.0 71 6120.0 72 4878.0 73 3636.0 74 2722.0 75 1381.0 76 954.0 77 671.5 78 389.0 79 371.5 80 354.0 81 212.0 82 70.0 83 39.0 84 8.0 85 8.5 86 9.0 87 10.0 88 11.0 89 7.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 2.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1543900.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.468902694097295 #Duplication Level Percentage of deduplicated Percentage of total 1 79.75124739771337 13.931667805235351 2 7.549650502878675 2.637682200184606 3 2.6291952860057033 1.3778746984503882 4 1.2939182530524416 0.9041332822675786 5 0.7885935304605362 0.6887931824404879 6 0.5472389416159934 0.5735798292906349 7 0.3863146773703722 0.47239454557992355 8 0.3148217391447829 0.4399672261685355 9 0.2283633736618141 0.3590331798054611 >10 3.796760818967683 16.70100157290241 >50 1.4144503837166997 17.183094969422232 >100 1.2830157690071726 42.10844412838149 >500 0.014518939613541561 1.6085477984903722 >1k 0.0015283094330043748 0.6373453497006043 >5k 3.820773582510937E-4 0.37644023167990454 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5640 0.3653086339788847 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3527 0.22844743830558972 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3492 0.22618045210182008 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03083101237126757 0.0 2 0.0 0.0 0.0 0.0978690329684565 0.0 3 0.0 0.0 0.0 0.13232722326575555 0.0 4 6.477103439341926E-5 0.0 0.0 0.19178703283891443 0.0 5 6.477103439341926E-5 0.0 0.0 0.37852192499514214 0.0 6 6.477103439341926E-5 0.0 0.0 0.5048254420623097 0.0 7 6.477103439341926E-5 0.0 0.0 0.6066455081287648 0.0 8 6.477103439341926E-5 0.0 0.0 0.8450676857309412 0.0 9 6.477103439341926E-5 0.0 0.0 0.9425480924930371 0.0 10 6.477103439341926E-5 0.0 0.0 1.2002720383444523 0.0 11 6.477103439341926E-5 0.0 0.0 1.3627825636375412 0.0 12 6.477103439341926E-5 0.0 0.0 1.5684305978366475 0.0 13 6.477103439341926E-5 0.0 0.0 1.6341084267115746 0.0 14 6.477103439341926E-5 0.0 0.0 1.655936265302157 0.0 15 6.477103439341926E-5 0.0 0.0 1.7028952652373859 0.0 16 6.477103439341926E-5 0.0 0.0 1.7933804002849925 0.0 17 6.477103439341926E-5 0.0 0.0 1.8957834056609884 0.0 18 6.477103439341926E-5 0.0 0.0 2.0669732495627957 0.0 19 6.477103439341926E-5 0.0 0.0 2.155256169441026 0.0 20 6.477103439341926E-5 0.0 0.0 2.2279292700304425 0.0 21 6.477103439341926E-5 0.0 0.0 2.323466545760736 0.0 22 1.943131031802578E-4 0.0 0.0 2.4187447373534554 0.0 23 1.943131031802578E-4 0.0 0.0 2.5413563054601984 0.0 24 1.943131031802578E-4 0.0 0.0 2.626854070859512 0.0 25 2.5908413757367703E-4 0.0 0.0 2.692078502493685 0.0 26 3.2385517196709633E-4 0.0 0.0 2.764686832048708 0.0 27 3.2385517196709633E-4 0.0 0.0 2.83917352160114 0.0 28 3.2385517196709633E-4 0.0 0.0 2.912882958740851 0.0 29 3.886262063605156E-4 0.0 0.0 2.9955955696612473 0.0 30 3.886262063605156E-4 0.0 0.0 3.1193730163870717 0.0 31 4.533972407539348E-4 0.0 0.0 3.2321393872660145 0.0 32 4.533972407539348E-4 0.0 0.0 3.3236608588639163 0.0 33 4.533972407539348E-4 0.0 0.0 3.417902713906341 0.0 34 4.533972407539348E-4 0.0 0.0 3.5210182006606647 0.0 35 4.533972407539348E-4 0.0 0.0 3.675108491482609 0.0 36 4.533972407539348E-4 0.0 0.0 3.7878100913271586 0.0 37 4.533972407539348E-4 0.0 0.0 3.9004469201373144 0.0 38 4.533972407539348E-4 0.0 0.0 4.003173780685278 0.0 39 4.533972407539348E-4 0.0 0.0 4.117300343286482 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACTC 30 2.165989E-6 45.000004 44 GCCTATA 30 2.165989E-6 45.000004 17 AATCGGT 30 2.165989E-6 45.000004 26 AAATGCG 30 2.165989E-6 45.000004 1 TATCCGC 30 2.165989E-6 45.000004 32 CTATATG 25 3.8914302E-5 45.0 1 CCGGATA 45 3.8562575E-10 45.0 20 ACGGGTA 25 3.8914302E-5 45.0 5 TCGATAG 20 7.0340396E-4 45.0 1 CGTTATT 20 7.0340396E-4 45.0 45 CTCGGTT 20 7.0340396E-4 45.0 33 ACTCGCG 20 7.0340396E-4 45.0 25 GTATCAC 20 7.0340396E-4 45.0 35 CGGCTAA 20 7.0340396E-4 45.0 38 CACGTAC 20 7.0340396E-4 45.0 42 ATACGCC 40 6.8175723E-9 45.0 2 TATACGA 20 7.0340396E-4 45.0 37 CGCCGAT 45 3.8562575E-10 45.0 38 TCGCGAT 20 7.0340396E-4 45.0 37 AATCGAC 25 3.8914302E-5 45.0 37 >>END_MODULE