##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545233_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1454842 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.275596250314468 31.0 31.0 33.0 30.0 34.0 2 31.540853920906876 31.0 31.0 34.0 30.0 34.0 3 31.62324224898649 31.0 31.0 34.0 30.0 34.0 4 35.367606929137324 37.0 35.0 37.0 33.0 37.0 5 35.22503199660169 37.0 35.0 37.0 32.0 37.0 6 35.22530144166858 37.0 35.0 37.0 32.0 37.0 7 35.87616524681031 37.0 35.0 37.0 35.0 37.0 8 35.975350587898895 37.0 35.0 37.0 35.0 37.0 9 37.64368776815627 39.0 37.0 39.0 35.0 39.0 10 36.855669550370415 39.0 37.0 39.0 32.0 39.0 11 36.49117567405945 39.0 35.0 39.0 32.0 39.0 12 35.50017321468586 37.0 35.0 39.0 31.0 39.0 13 35.03665277741501 37.0 34.0 39.0 30.0 39.0 14 35.79404842587717 38.0 34.0 40.0 29.0 41.0 15 36.24185994080457 38.0 35.0 40.0 31.0 41.0 16 36.198367245377845 38.0 35.0 40.0 31.0 41.0 17 36.31002679328752 37.0 35.0 40.0 31.0 41.0 18 36.38074100142833 37.0 35.0 40.0 31.0 41.0 19 36.336895690391124 37.0 35.0 40.0 31.0 41.0 20 36.20615915680191 37.0 35.0 40.0 31.0 41.0 21 36.06054746838488 37.0 34.0 40.0 31.0 41.0 22 35.94764448648032 36.0 34.0 40.0 30.0 41.0 23 35.884298088727164 36.0 34.0 40.0 30.0 41.0 24 35.72548977827145 36.0 34.0 40.0 30.0 41.0 25 35.70158065274442 36.0 34.0 40.0 30.0 41.0 26 35.57760430342264 36.0 34.0 40.0 30.0 41.0 27 35.54894620859172 36.0 34.0 40.0 30.0 41.0 28 35.60403947645174 36.0 34.0 40.0 30.0 41.0 29 35.61008480646008 36.0 34.0 40.0 30.0 41.0 30 35.529467804751306 36.0 34.0 40.0 30.0 41.0 31 35.41056485858945 36.0 34.0 40.0 29.0 41.0 32 35.26113488612509 36.0 34.0 40.0 29.0 41.0 33 35.067589470196765 36.0 34.0 40.0 29.0 41.0 34 34.940882927493156 36.0 34.0 40.0 27.0 41.0 35 34.78174399694262 35.0 34.0 40.0 27.0 41.0 36 34.55124680205823 35.0 33.0 40.0 25.0 41.0 37 34.38088122284069 35.0 33.0 40.0 25.0 41.0 38 34.47126904502345 35.0 33.0 40.0 26.0 41.0 39 34.476420119848065 35.0 33.0 40.0 26.0 41.0 40 34.33263474659104 35.0 33.0 40.0 24.0 41.0 41 34.3641873138114 35.0 33.0 40.0 25.0 41.0 42 34.30778600012923 35.0 33.0 40.0 25.0 41.0 43 34.181520055098765 35.0 33.0 40.0 25.0 41.0 44 34.15243579715185 35.0 33.0 40.0 25.0 41.0 45 34.08706924875691 35.0 33.0 39.0 24.0 41.0 46 34.023986797191725 35.0 33.0 39.0 24.0 41.0 47 34.05682472735871 35.0 33.0 39.0 25.0 41.0 48 34.077352042352366 35.0 33.0 39.0 25.0 41.0 49 34.0761642845065 35.0 33.0 39.0 24.0 41.0 50 33.85191794022994 35.0 33.0 39.0 24.0 41.0 51 33.6655499360068 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 1.0 13 8.0 14 11.0 15 50.0 16 104.0 17 321.0 18 742.0 19 1513.0 20 2469.0 21 3984.0 22 5958.0 23 8917.0 24 12246.0 25 17507.0 26 22946.0 27 27455.0 28 31087.0 29 37020.0 30 44148.0 31 54975.0 32 69867.0 33 92012.0 34 156051.0 35 228813.0 36 100925.0 37 121821.0 38 168824.0 39 244894.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.53731882912371 24.355978174949584 28.89365305648311 13.213049939443597 2 32.32241026860649 25.64072249770078 28.665105901534325 13.371761332158405 3 28.815912655807296 25.87628072326754 31.144894084718477 14.162912536206681 4 27.033176111220325 27.832025745751082 30.719830744506964 14.414967398521627 5 22.515297193784615 33.330079829974665 28.97964177553301 15.174981200707705 6 21.463842809047307 40.468449494859236 27.749611297996623 10.318096398096838 7 87.74973502277223 4.6825703409717345 5.854243966011429 1.713450670244604 8 89.69736919885459 3.1443277001901233 5.611605933840239 1.5466971671150544 9 85.35435463094962 4.694049250709012 7.345814871992973 2.6057812463484007 10 53.2370525459122 23.610467665904615 12.820979872728447 10.331499915454737 11 46.462296249352164 20.734416520831818 19.912746538799404 12.89054069101662 12 42.88843736983123 21.316954006002025 23.331193352955164 12.463415271211582 13 21.176113969764415 43.81980998623906 21.912070176692726 13.092005867303804 14 14.93014361697009 44.84899391136632 25.94109875849061 14.279763713172978 15 12.964500612437641 24.194723550736093 49.87613775241573 12.96463808441054 16 14.784629533653826 18.67673603044179 47.42508121156799 19.11355322433639 17 14.8768044914843 18.67783580622501 29.567334459687032 36.87802524260366 18 19.576833773014528 22.555713953817666 38.08214225324812 19.785310019919688 19 30.626830954839086 23.256546071669636 26.261614663310517 19.85500831018076 20 33.07988083929389 22.185020778888703 25.70203499761486 19.033063384202546 21 21.59505980718181 30.782999116055215 27.2244683615128 20.397472715250178 22 21.167384499485166 26.11568816407555 23.265000598003084 29.451926738436203 23 18.0415467796503 32.784041153609806 24.90545365063698 24.26895841610292 24 17.60699787330858 23.297100303675588 42.029100067223794 17.06680175579204 25 16.24011404674872 26.133559520552748 38.21920181023094 19.407124622467595 26 16.099961370375617 36.665562308484354 27.177384210794024 20.057092110346 27 15.615853817802897 38.69588587626698 27.62080005938789 18.067460246542236 28 14.415586022399685 29.79375079905584 39.18824174721379 16.60242143133069 29 14.632929211556995 25.2863884875471 38.1568582705201 21.92382403037581 30 17.86681990209246 34.46401739845289 30.014943203454397 17.654219496000252 31 30.0241538256388 28.527840136592154 24.43344363167959 17.01456240608946 32 32.95959286300506 24.9345977088921 25.929894792699137 16.175914635403707 33 30.682094687945494 26.892679754914965 23.21702287946045 19.208202677679086 34 20.34433979772374 25.75420561133099 26.81720764179203 27.08424694915324 35 20.50683166969334 25.200743448429453 32.41472269840986 21.877702183467346 36 32.677775318556925 26.185867606241775 24.311093575797234 16.82526349940406 37 20.655095192467634 37.125131113894156 25.88590376137065 16.333869932267557 38 19.6960907095066 36.66054458147345 24.189155935833583 19.454208773186366 39 20.344064853777937 35.526538277008775 25.42372298847572 18.705673880737564 40 26.565633931382237 24.9524690653693 26.075890027920558 22.406006975327905 41 16.90912140287399 25.010619709906646 26.915225158470818 31.165033728748554 42 19.119120839238903 24.673675904325005 24.760901871131022 31.44630138530507 43 19.3896656819091 24.668039553436046 27.72349162314533 28.218803141509525 44 17.359617058072285 29.877196286607067 31.872120821367545 20.891065833953103 45 15.806664916190211 40.60798354735428 23.290501648976313 20.29484988747919 46 19.382242195372417 36.47681328969056 25.378151029458866 18.76279348547815 47 19.33708265227427 28.695349735572663 26.74249162452005 25.225075987633023 48 20.156346874780905 24.908203090095007 33.77088371108341 21.16456632404069 49 19.62948553863581 25.796134563065955 35.59032527243508 18.984054625863152 50 19.058083283270623 36.667830596037234 26.340935991674698 17.93315012901745 51 16.889050494830364 35.48316586955834 25.80018998626655 21.82759364934474 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2831.0 1 3186.5 2 3542.0 3 6397.5 4 9253.0 5 6902.0 6 4551.0 7 4641.0 8 4731.0 9 5024.5 10 5318.0 11 5693.0 12 6068.0 13 6130.5 14 6193.0 15 6049.5 16 5906.0 17 6007.0 18 6108.0 19 5435.0 20 4762.0 21 5731.5 22 6701.0 23 6735.0 24 6769.0 25 7000.0 26 9893.0 27 12555.0 28 14694.5 29 16834.0 30 21316.5 31 25799.0 32 31445.0 33 37091.0 34 40529.5 35 43968.0 36 48863.0 37 53758.0 38 61831.5 39 69905.0 40 94438.0 41 118971.0 42 142512.5 43 166054.0 44 163395.5 45 160737.0 46 148939.0 47 137141.0 48 123414.0 49 109687.0 50 101479.0 51 93271.0 52 81341.0 53 69411.0 54 61940.0 55 54469.0 56 48925.0 57 43381.0 58 42638.5 59 41896.0 60 38432.5 61 34969.0 62 31492.5 63 28016.0 64 23903.5 65 19791.0 66 16528.0 67 13265.0 68 11168.0 69 9071.0 70 7409.5 71 5748.0 72 5247.0 73 4746.0 74 3370.0 75 1632.0 76 1270.0 77 1010.5 78 751.0 79 474.0 80 197.0 81 134.5 82 72.0 83 56.0 84 40.0 85 27.5 86 15.0 87 9.0 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1454842.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.609282613116868 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7534539826561 13.867918279396857 2 7.084480256656163 2.495052300130102 3 2.4614980256415993 1.3003564315545635 4 1.2444441864855047 0.8765507750429428 5 0.8152166519050766 0.7177690207157708 6 0.5797594540219485 0.6125488844099297 7 0.4730120121859447 0.5830581541386967 8 0.3777620234390417 0.5321694584992772 9 0.3242259464393789 0.5138447689220684 >10 5.088710769640459 22.33782826054804 >50 1.54348277558473 18.921996429020606 >100 1.2459002614240733 35.67664291818199 >500 0.006442923136000379 0.7429191874326321 >1k 0.0016107307840000948 0.8213451320065072 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4840 0.3326821744216898 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2969 0.2040771437723134 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2426 0.16675350312954945 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.873598645076235E-5 0.0 0.0 0.013678461303701707 0.0 2 6.873598645076235E-5 0.0 0.0 0.05986904419861401 0.0 3 6.873598645076235E-5 0.0 0.0 0.0912813900066124 0.0 4 6.873598645076235E-5 0.0 0.0 0.13190435799901296 0.0 5 6.873598645076235E-5 0.0 0.0 0.2453874716292216 0.0 6 6.873598645076235E-5 0.0 0.0 0.3635446323380821 0.0 7 6.873598645076235E-5 0.0 0.0 0.4432783766209664 0.0 8 6.873598645076235E-5 0.0 0.0 0.6500362238648596 0.0 9 6.873598645076235E-5 0.0 0.0 0.7421424457088811 0.0 10 6.873598645076235E-5 0.0 0.0 0.9021598221662559 0.0 11 6.873598645076235E-5 0.0 0.0 1.0475364335096182 0.0 12 6.873598645076235E-5 0.0 0.0 1.1819840230073093 0.0 13 6.873598645076235E-5 0.0 0.0 1.2328486529808735 0.0 14 6.873598645076235E-5 0.0 0.0 1.2487266658509997 0.0 15 6.873598645076235E-5 0.0 0.0 1.2764960043771076 0.0 16 6.873598645076235E-5 0.0 0.0 1.3488749981097603 0.0 17 6.873598645076235E-5 0.0 0.0 1.4317705977693798 0.0 18 6.873598645076235E-5 0.0 0.0 1.5733667298579501 0.0 19 6.873598645076235E-5 0.0 0.0 1.6256060795605296 0.0 20 6.873598645076235E-5 0.0 0.0 1.6886369791358786 0.0 21 6.873598645076235E-5 0.0 0.0 1.7768252497522068 0.0 22 6.873598645076235E-5 0.0 0.0 1.8591022255337692 0.0 23 6.873598645076235E-5 0.0 0.0 1.9594567657518824 0.0 24 1.374719729015247E-4 0.0 0.0 2.0360286546580317 0.0 25 1.374719729015247E-4 0.0 0.0 2.100640481921748 0.0 26 1.374719729015247E-4 0.0 0.0 2.1632589655783927 0.0 27 1.374719729015247E-4 0.0 0.0 2.222990537804105 0.0 28 1.374719729015247E-4 0.0 0.0 2.2873961571084696 0.0 29 1.374719729015247E-4 0.0 0.0 2.361218606556588 0.0 30 1.374719729015247E-4 0.0 0.0 2.4641163782733795 0.0 31 1.374719729015247E-4 0.0 0.0 2.5560163921580488 0.0 32 1.374719729015247E-4 0.0 0.0 2.636025080386736 0.0 33 2.0620795935228706E-4 0.0 0.0 2.717958376236045 0.0 34 2.749439458030494E-4 0.0 0.0 2.8103395420258694 0.0 35 2.749439458030494E-4 0.0 0.0 2.9417627481197273 0.0 36 2.749439458030494E-4 0.0 0.0 3.0430108561617 0.0 37 2.749439458030494E-4 0.0 0.0 3.1449463240681808 0.0 38 2.749439458030494E-4 0.0 0.0 3.240833025166994 0.0 39 2.749439458030494E-4 0.0 0.0 3.3530101550546383 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTTA 30 2.1659016E-6 45.000004 13 TATAGCG 30 2.1659016E-6 45.000004 1 CCGAACG 55 1.8189894E-12 45.000004 1 AAACTCG 20 7.033905E-4 45.0 19 CGTATCA 20 7.033905E-4 45.0 22 CTATACG 35 1.2122291E-7 45.0 1 CCGTATT 20 7.033905E-4 45.0 30 CCGTACT 35 1.2122291E-7 45.0 33 CTACGAC 20 7.033905E-4 45.0 42 CGGTGAT 20 7.033905E-4 45.0 17 CATACCG 20 7.033905E-4 45.0 12 CTCGCGA 20 7.033905E-4 45.0 11 CCGAATA 20 7.033905E-4 45.0 24 GTACGTC 20 7.033905E-4 45.0 9 GTTTGCG 25 3.89132E-5 44.999996 1 GCCCAAT 25 3.89132E-5 44.999996 24 TACGGGA 300 0.0 42.750004 4 GGCGATA 465 0.0 42.580647 8 AATGCGG 265 0.0 42.45283 2 ACGGGAA 205 0.0 41.707317 5 >>END_MODULE