##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545232_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2209754 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.270792585962056 31.0 31.0 34.0 30.0 34.0 2 31.526921096194418 31.0 31.0 34.0 30.0 34.0 3 31.617324824392217 31.0 31.0 34.0 30.0 34.0 4 35.35642926769224 37.0 35.0 37.0 33.0 37.0 5 35.20184328210289 37.0 35.0 37.0 32.0 37.0 6 35.19750162235253 37.0 35.0 37.0 32.0 37.0 7 35.878568836169094 37.0 35.0 37.0 35.0 37.0 8 35.99951306797046 37.0 35.0 37.0 35.0 37.0 9 37.701986736985205 39.0 38.0 39.0 35.0 39.0 10 36.85471821750294 39.0 37.0 39.0 32.0 39.0 11 36.378823163121325 38.0 35.0 39.0 32.0 39.0 12 35.210525696525494 35.0 35.0 39.0 30.0 39.0 13 34.643398314925555 35.0 33.0 39.0 27.0 39.0 14 35.34769254858233 36.0 33.0 40.0 27.0 41.0 15 35.939055207050195 37.0 34.0 40.0 30.0 41.0 16 35.97872251843418 36.0 34.0 40.0 31.0 41.0 17 36.08582720067483 36.0 34.0 40.0 31.0 41.0 18 36.19981228679754 36.0 35.0 40.0 31.0 41.0 19 36.11708543122899 36.0 35.0 40.0 31.0 41.0 20 35.96655600578164 36.0 34.0 40.0 31.0 41.0 21 35.80127471202677 36.0 34.0 40.0 31.0 41.0 22 35.70024536667883 35.0 34.0 40.0 30.0 41.0 23 35.69257663975266 35.0 34.0 40.0 30.0 41.0 24 35.53124646453859 35.0 34.0 40.0 30.0 41.0 25 35.54784650237085 35.0 34.0 40.0 30.0 41.0 26 35.427210902209026 35.0 34.0 40.0 30.0 41.0 27 35.348974139202824 35.0 34.0 40.0 30.0 41.0 28 35.47137192646783 36.0 34.0 40.0 30.0 41.0 29 35.52632419717308 36.0 34.0 40.0 30.0 41.0 30 35.46592471379167 36.0 34.0 40.0 30.0 41.0 31 35.29449748705059 35.0 34.0 40.0 30.0 41.0 32 35.120035080828 35.0 34.0 40.0 29.0 41.0 33 34.937014708424556 35.0 34.0 40.0 29.0 41.0 34 34.812357846167494 35.0 34.0 40.0 27.0 41.0 35 34.650871544977406 35.0 34.0 40.0 27.0 41.0 36 34.39161010682637 35.0 33.0 40.0 25.0 41.0 37 34.216132655490156 35.0 33.0 40.0 25.0 41.0 38 34.368671354367955 35.0 33.0 40.0 27.0 41.0 39 34.405768696425035 35.0 33.0 40.0 27.0 41.0 40 34.24542098351219 35.0 33.0 40.0 24.0 41.0 41 34.331157676374836 35.0 33.0 40.0 25.0 41.0 42 34.295418404039545 35.0 33.0 40.0 26.0 41.0 43 34.17279660993939 35.0 33.0 40.0 26.0 41.0 44 34.16188136779026 35.0 33.0 40.0 25.0 41.0 45 34.10526873127054 35.0 33.0 39.0 25.0 41.0 46 34.039846969391164 35.0 33.0 39.0 25.0 41.0 47 34.08362921845599 35.0 33.0 39.0 26.0 41.0 48 34.132424242698505 35.0 33.0 39.0 26.0 41.0 49 34.17235674197218 35.0 33.0 39.0 26.0 41.0 50 33.94515498105219 35.0 33.0 39.0 24.0 41.0 51 33.74069557063818 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 2.0 13 4.0 14 11.0 15 58.0 16 143.0 17 460.0 18 1059.0 19 2051.0 20 3705.0 21 5973.0 22 9250.0 23 13572.0 24 19393.0 25 27336.0 26 36036.0 27 42020.0 28 47318.0 29 55764.0 30 67881.0 31 85275.0 32 109144.0 33 144794.0 34 255952.0 35 384929.0 36 137538.0 37 160070.0 38 228657.0 39 371069.0 40 287.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.692400149518903 25.19936608328348 31.02725461748231 14.080979149715308 2 28.168293846283344 27.495775547866412 30.979511746556405 13.35641885929384 3 26.508063793526336 26.480549418623067 33.36000296865624 13.651383819194354 4 24.333794621482756 28.9794701129628 32.44320408516061 14.243531180393838 5 22.226455976547616 32.79197593940321 30.86456682508551 14.117001258963668 6 20.611479829881514 41.365328448325016 27.69244902373749 10.330742698055982 7 88.5404438684125 4.542406077780604 5.537267949283042 1.379882104523852 8 91.29939350715057 2.922859286599323 4.718036487319402 1.0597107189307045 9 87.52680162588233 4.778586213669033 6.001754041400083 1.6928581190485454 10 57.36493745457639 24.80850809637634 11.516304529825492 6.310249919221778 11 49.9024778323741 17.806914253803818 21.73730650561103 10.55330140821105 12 46.970794034087056 21.060851117364194 22.574096483137943 9.394258365410812 13 19.36858129909483 50.127208730021536 19.920316922155134 10.583893048728502 14 11.173822968529528 50.172326874394166 25.626562956781612 13.027287200294694 15 9.047341921317939 24.89833709996678 53.33104951953928 12.723271459176 16 10.782331426937116 18.005669409355068 51.99592352813933 19.216075635568483 17 11.118115410131626 19.27562977598411 30.021305538987598 39.584949274896665 18 16.869932128191646 23.589639389723924 40.83984009079744 18.700588391286992 19 29.2516271041935 24.10648425118814 26.500099106054336 20.14178953856402 20 31.727830337675595 22.598262068990486 27.503966504868867 18.16994108846505 21 17.200240388749155 33.662072791813024 29.746297551673173 19.391389267764648 22 19.475878310436364 26.293560278655452 22.82629650178255 31.40426490912563 23 14.258419715497745 34.91275499444735 26.135216861243375 24.693608428811533 24 13.601151983433448 22.83720269315046 49.34006228747634 14.221583035939748 25 10.852022442317107 27.871744999669644 43.00066885273202 18.275563705281222 26 11.804798181155006 40.75290733719681 28.036876502995355 19.405417978652828 27 11.184502890366982 44.33629263709897 28.074437245050802 16.40476722748324 28 9.663157075402964 32.53298783484496 41.87832672777151 15.925528361980565 29 10.135291077649368 25.009163915983407 41.377094463908655 23.478450542458575 30 14.598593327583071 38.913833847568554 30.383925088494014 16.10364773635436 31 29.157725249054874 31.084093523532484 24.68292850697408 15.075252720438565 32 31.819333735791407 25.396989891182457 27.275524786921984 15.508151586104155 33 30.86986153209814 27.87903087855028 22.991473259014352 18.259634330337224 34 16.82363738226065 26.50503178181825 27.250092091698896 29.421238744222205 35 17.78962726167709 25.962437447788307 34.68177905775937 21.56615623277523 36 32.16444002364064 26.690210765542226 24.79113059643743 16.3542186143797 37 15.848551467719938 40.220133100788594 29.01997235891416 14.91134307257731 38 16.00182644764983 38.30100545128553 26.3992734032838 19.29789469778084 39 16.77652806602002 39.73731917670474 26.730486741963134 16.755666015312112 40 25.551169949234172 26.116119712873015 25.98031274069421 22.352397597198603 41 13.544946632068546 24.73646387787962 28.483125270957764 33.23546421909407 42 15.788137503088578 24.37216993384784 26.43072486801698 33.4089676950466 43 16.545325859801586 25.68978266359061 28.112541033979348 29.652350442628457 44 14.132523348752848 31.38779248730854 32.85157533372493 21.62810883021368 45 12.28838142164241 46.659266144557265 21.58448406474205 19.467868369058277 46 17.36912796628041 40.505821009940476 24.79266922924452 17.332381794534594 47 16.417574082906967 30.133082687032132 28.091950506707985 25.357392723352916 48 17.760800523497185 25.40011241070273 37.380359985772174 19.458727080027913 49 18.69945704363472 25.871658112169953 37.71510312912659 17.713781715068734 50 17.18141476381534 40.07762855050834 26.166215786915647 16.574740898760677 51 14.479937585812719 38.243351974925716 24.987758818402412 22.288951620859155 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6654.0 1 5329.0 2 4004.0 3 8851.5 4 13699.0 5 9940.5 6 6182.0 7 6718.5 8 7255.0 9 8353.0 10 9451.0 11 10263.5 12 11076.0 13 11107.5 14 11139.0 15 10434.0 16 9729.0 17 9255.0 18 8781.0 19 8519.5 20 8258.0 21 8478.5 22 8699.0 23 9274.5 24 9850.0 25 13069.0 26 21113.0 27 25938.0 28 32414.5 29 38891.0 30 45069.5 31 51248.0 32 59896.0 33 68544.0 34 83648.0 35 98752.0 36 99288.0 37 99824.0 38 115026.0 39 130228.0 40 175617.5 41 221007.0 42 257715.5 43 294424.0 44 291683.5 45 288943.0 46 258102.5 47 227262.0 48 197556.5 49 167851.0 50 148433.0 51 129015.0 52 108687.0 53 88359.0 54 70021.5 55 51684.0 56 42188.0 57 32692.0 58 27659.5 59 22627.0 60 19533.5 61 16440.0 62 13404.0 63 10368.0 64 8077.0 65 5786.0 66 4543.0 67 3300.0 68 2683.0 69 2066.0 70 1721.0 71 1376.0 72 1203.0 73 1030.0 74 734.5 75 348.0 76 257.0 77 253.5 78 250.0 79 145.5 80 41.0 81 41.0 82 41.0 83 22.0 84 3.0 85 3.0 86 3.0 87 1.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2209754.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.48701740702996 #Duplication Level Percentage of deduplicated Percentage of total 1 78.0248593326954 12.083723546665176 2 9.075882968585686 2.8111671503730653 3 3.264179731441943 1.5165722496154725 4 1.6338261928891717 1.0121237875734437 5 0.9791472044086754 0.7582034899360939 6 0.6226777259306139 0.5786052468274349 7 0.44955689888212846 0.4873606862906551 8 0.31306959828742764 0.38788114546314145 9 0.2597588641810316 0.3620601046081771 >10 2.6726545838490505 9.679628896723266 >50 1.068930357870145 12.087157002527876 >100 1.601277404834708 53.337313841827125 >500 0.03145690406169992 3.242234133491179 >1k 0.0015123511568124958 0.37217254010153167 >5k 0.0012098809254499968 1.28379617797641 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8823 0.39927521344004807 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 7452 0.3372321081894184 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6018 0.2723380068550617 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5113 0.23138322184279336 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3576171827271271E-4 0.0 0.0 0.028374199118996957 0.0 2 1.3576171827271271E-4 0.0 0.0 0.09811046840508038 0.0 3 1.3576171827271271E-4 0.0 0.0 0.14702994088934787 0.0 4 1.3576171827271271E-4 0.0 0.0 0.2073533977085232 0.0 5 1.8101562436361693E-4 0.0 0.0 0.38207872912550445 0.0 6 1.8101562436361693E-4 0.0 0.0 0.5395170684157603 0.0 7 1.8101562436361693E-4 0.0 0.0 0.6522445484882028 0.0 8 1.8101562436361693E-4 0.0 0.0 0.9173871842748107 0.0 9 1.8101562436361693E-4 0.0 0.0 1.0321510901213438 0.0 10 1.8101562436361693E-4 0.0 0.0 1.2384183940836853 0.0 11 1.8101562436361693E-4 0.0 0.0 1.4691680612412061 0.0 12 1.8101562436361693E-4 0.0 0.0 1.6684210097594574 0.0 13 1.8101562436361693E-4 0.0 0.0 1.7409630212231768 0.0 14 1.8101562436361693E-4 0.0 0.0 1.7658074156670833 0.0 15 1.8101562436361693E-4 0.0 0.0 1.8044542514687156 0.0 16 1.8101562436361693E-4 0.0 0.0 1.9061397784549774 0.0 17 1.8101562436361693E-4 0.0 0.0 2.038778977207418 0.0 18 1.8101562436361693E-4 0.0 0.0 2.2450462811697594 0.0 19 1.8101562436361693E-4 0.0 0.0 2.333065128516568 0.0 20 1.8101562436361693E-4 0.0 0.0 2.4269217297491035 0.0 21 1.8101562436361693E-4 0.0 0.0 2.5543567293010896 0.0 22 1.8101562436361693E-4 0.0 0.0 2.697721103797074 0.0 23 1.8101562436361693E-4 0.0 0.0 2.8597300876025114 0.0 24 2.2626953045452118E-4 0.0 0.0 2.9758968645378627 0.0 25 2.2626953045452118E-4 0.0 0.0 3.068441102493762 0.0 26 2.2626953045452118E-4 0.0 0.0 3.1656464927770243 0.0 27 2.2626953045452118E-4 0.0 0.0 3.2561995588649233 0.0 28 2.2626953045452118E-4 0.0 0.0 3.35761356241464 0.0 29 2.2626953045452118E-4 0.0 0.0 3.4726037377916277 0.0 30 2.2626953045452118E-4 0.0 0.0 3.6385498114269734 0.0 31 2.2626953045452118E-4 0.0 0.0 3.779968267961049 0.0 32 2.2626953045452118E-4 0.0 0.0 3.899529087853218 0.0 33 2.2626953045452118E-4 0.0 0.0 4.012799614798752 0.0 34 2.2626953045452118E-4 0.0 0.0 4.146434399485192 0.0 35 2.2626953045452118E-4 0.0 0.0 4.34604937925217 0.0 36 2.2626953045452118E-4 0.0 0.0 4.482942445177155 0.0 37 2.2626953045452118E-4 0.0 0.0 4.633094905586776 0.0 38 2.2626953045452118E-4 0.0 0.0 4.771707619943215 0.0 39 2.7152343654542543E-4 0.0 0.0 4.917289435837654 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 190 0.0 45.0 25 CGGGTCC 25 3.8919792E-5 45.0 6 AACCGGT 20 7.0347026E-4 45.0 11 CAGCGCG 75 0.0 45.0 1 GTACCGT 20 7.0347026E-4 45.0 18 CCTAGCG 25 3.8919792E-5 45.0 15 TGGCGCG 25 3.8919792E-5 45.0 1 TCGATTG 35 1.2126111E-7 45.0 1 TACGGAC 20 7.0347026E-4 45.0 4 TCGATAG 25 3.8919792E-5 45.0 1 CGCCTAC 35 1.2126111E-7 45.0 30 ATATCGA 25 3.8919792E-5 45.0 12 TACGCAA 35 1.2126111E-7 45.0 30 CTACGCG 55 1.8189894E-12 45.0 1 ACGTGGT 35 1.2126111E-7 45.0 29 ACGTGCG 75 0.0 45.0 1 AACGCAC 25 3.8919792E-5 45.0 35 CGGTGCG 25 3.8919792E-5 45.0 13 ACCCGCG 20 7.0347026E-4 45.0 1 GCCAGCG 20 7.0347026E-4 45.0 1 >>END_MODULE