SRR1545231_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545231_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2687516
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10290	0.382881441450023	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9873	0.36736525475569265	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	8938	0.332574764206055	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3434	0.12777598347321467	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTACG	105	0.0	45.000004	1
GTTAGTC	40	6.8212103E-9	45.000004	27
GCACCGT	20	7.0349727E-4	45.000004	27
ATGTACG	185	0.0	45.000004	1
GCCGAAT	20	7.0349727E-4	45.000004	41
TCTACGA	20	7.0349727E-4	45.000004	10
TACGATA	85	0.0	45.000004	32
CTACGAT	85	0.0	45.000004	31
CTACGAC	20	7.0349727E-4	45.000004	11
TACGACA	20	7.0349727E-4	45.000004	12
ACGGATA	20	7.0349727E-4	45.000004	25
GTCCGCT	20	7.0349727E-4	45.000004	20
ACTCGAT	20	7.0349727E-4	45.000004	20
TCGAGGT	20	7.0349727E-4	45.000004	16
ATACCCG	20	7.0349727E-4	45.000004	15
AATCGAT	20	7.0349727E-4	45.000004	11
CAAGTCG	35	1.2127384E-7	45.0	1
CACGGAC	25	3.8922044E-5	45.0	34
GACGTAT	75	0.0	45.0	9
CGCATGT	35	1.2127384E-7	45.0	38