##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545227_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1705663 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.211568170265757 31.0 31.0 33.0 30.0 34.0 2 31.464240005206186 31.0 31.0 34.0 30.0 34.0 3 31.558128422789263 31.0 31.0 34.0 30.0 34.0 4 35.31020723319906 37.0 35.0 37.0 33.0 37.0 5 35.16185670909201 37.0 35.0 37.0 32.0 37.0 6 35.15508221729615 37.0 35.0 37.0 32.0 37.0 7 35.82911688885788 37.0 35.0 37.0 35.0 37.0 8 35.93691837133127 37.0 35.0 37.0 35.0 37.0 9 37.62718954447625 39.0 37.0 39.0 35.0 39.0 10 36.813824301752454 39.0 37.0 39.0 32.0 39.0 11 36.413124984243666 38.0 35.0 39.0 32.0 39.0 12 35.15692842020962 35.0 35.0 39.0 30.0 39.0 13 34.56162149263952 35.0 33.0 39.0 27.0 39.0 14 35.257627679090184 36.0 33.0 40.0 26.0 41.0 15 35.802520779309866 36.0 34.0 40.0 30.0 41.0 16 35.812017966034325 36.0 34.0 40.0 31.0 41.0 17 35.879360694345834 36.0 34.0 40.0 31.0 41.0 18 35.985363462770785 36.0 35.0 40.0 31.0 41.0 19 35.928888062882294 36.0 35.0 40.0 31.0 41.0 20 35.740514392350654 36.0 34.0 40.0 30.0 41.0 21 35.567112026232614 35.0 34.0 40.0 30.0 41.0 22 35.43747094238428 35.0 34.0 40.0 30.0 41.0 23 35.422490843736426 35.0 34.0 40.0 30.0 41.0 24 35.254081843834335 35.0 34.0 40.0 29.0 41.0 25 35.24203432917288 35.0 34.0 40.0 29.0 41.0 26 35.10612002488182 35.0 34.0 40.0 29.0 41.0 27 35.040044252586824 35.0 34.0 40.0 29.0 41.0 28 35.12825745765723 36.0 34.0 40.0 29.0 41.0 29 35.17050847676241 36.0 34.0 40.0 29.0 41.0 30 35.09227965899477 36.0 34.0 40.0 29.0 41.0 31 34.904519239732586 35.0 34.0 40.0 29.0 41.0 32 34.72556009012331 35.0 34.0 40.0 28.0 41.0 33 34.522383964475985 35.0 33.0 40.0 27.0 41.0 34 34.34497670407343 35.0 33.0 40.0 26.0 41.0 35 34.181864764610594 35.0 33.0 40.0 25.0 41.0 36 33.920411593614915 35.0 33.0 39.0 23.0 41.0 37 33.73222260200286 35.0 33.0 39.0 23.0 41.0 38 33.84071648385408 35.0 33.0 39.0 24.0 41.0 39 33.850186115311175 35.0 33.0 39.0 24.0 41.0 40 33.69662178284925 35.0 33.0 39.0 23.0 41.0 41 33.748671337773054 35.0 33.0 39.0 23.0 41.0 42 33.699345650342416 35.0 33.0 39.0 23.0 41.0 43 33.541470384243546 35.0 33.0 39.0 23.0 41.0 44 33.52142539294105 35.0 33.0 39.0 23.0 41.0 45 33.432013826881395 35.0 32.0 39.0 23.0 41.0 46 33.391138226015336 35.0 32.0 38.0 23.0 41.0 47 33.41157544016608 35.0 32.0 38.0 23.0 41.0 48 33.4301383098537 35.0 33.0 38.0 23.0 40.0 49 33.449455138559024 35.0 33.0 38.0 24.0 40.0 50 33.18605316525011 35.0 32.0 38.0 24.0 40.0 51 32.96892586636399 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 6.0 14 19.0 15 44.0 16 166.0 17 438.0 18 1021.0 19 2098.0 20 3686.0 21 5834.0 22 8993.0 23 13039.0 24 17806.0 25 24224.0 26 31232.0 27 36825.0 28 42005.0 29 48349.0 30 57460.0 31 69929.0 32 87310.0 33 115290.0 34 199100.0 35 296035.0 36 109114.0 37 128722.0 38 171694.0 39 235030.0 40 187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.36233476366668 24.3314769681936 28.481007092256792 13.825181175882925 2 30.237977842047343 26.313052461125086 30.457071531715236 12.991898165112334 3 28.319544951142166 25.98274102211281 31.701455680283853 13.996258346461172 4 25.454383427441414 27.932891784602234 31.83630060568823 14.776424182268128 5 22.501572702227815 32.10851147031975 30.678451722292156 14.71146410516028 6 20.510499436289585 40.95703547535475 27.8383830803623 10.694082007993373 7 86.99145141801165 4.855765763811491 6.6185407082172745 1.5342421099595875 8 89.37638912258751 3.25228371606818 5.855201173971646 1.5161259873726523 9 85.9477516953818 3.9832018399883213 7.171991184659572 2.8970552799703104 10 59.88322429459981 19.17670723935502 11.43285631452403 9.507212151521138 11 52.52778538316185 17.716336697225653 17.206916020339307 12.548961899273186 12 45.52898198530425 19.77981582528319 22.956527754896484 11.73467443451608 13 20.402916637108266 45.7905225123603 21.6521083004087 12.154452550122738 14 13.397136480066695 46.96537358200301 27.117431755276396 12.520058182653901 15 12.215836305295946 20.53793744719795 54.79241796298565 12.453808284520447 16 14.660516174648802 15.804528796133821 50.52715571598845 19.007799313228933 17 14.005814747696348 15.979358173332011 29.22453028529082 40.79029679368082 18 19.693808214166573 20.67026135877955 39.81190891752943 19.82402150952445 19 33.69258757445052 20.94903858499598 24.951294599226227 20.40707924132727 20 35.561831381697324 20.79730872980184 24.681839261331223 18.95902062716961 21 21.827758472805 30.855626228627813 27.62216217388781 19.694453124679377 22 21.891135587745058 23.364697481272678 23.29088454167089 31.453282389311372 23 18.20359590376294 31.778493172449657 24.434428137328418 25.583482786458987 24 17.91655209733693 20.89814928271294 45.01270180569081 16.172596814259325 25 15.427549287285942 23.091489936757732 41.8008129390155 19.680147836940826 26 14.97652232592253 37.15089088524521 27.39878862354404 20.47379816528822 27 15.52797944259798 38.66672373147568 27.436662459114142 18.368634366812202 28 13.11273094392034 29.163967325315728 40.564343601285834 17.158958129478098 29 13.72398885360121 23.908415671794486 39.82855933440545 22.539036140198856 30 18.267266159845175 34.92723943709865 29.592715559873202 17.212778843182974 31 33.78187836635959 26.571837461444613 23.37050167588791 16.275782496307887 32 36.54690287589049 22.287638296662355 25.921591779853348 15.24386704759381 33 34.30953242228975 24.91224819908739 22.023987153382585 18.754232225240273 34 20.496370033236342 25.506503922521624 25.484870106228485 28.51225593801355 35 20.626993726193273 24.337750188636324 33.03337177390844 22.001884311261954 36 36.405432960672776 24.52752976408587 23.159088284145227 15.907948991096129 37 20.76054883057204 37.31452227081199 25.665679562727224 16.259249335888743 38 19.714855748175342 38.58505460926337 21.194514977460376 20.5055746651009 39 20.851715725791085 36.0105718421517 24.605798449048848 18.531913983008366 40 27.816925148754475 23.039779839276576 24.43577658658246 24.707518425386493 41 16.206835699666346 22.75056678839841 25.75022146813292 35.29237604380232 42 19.772135527357985 22.648788183832327 24.476874974716576 33.10220131409311 43 20.328107017623058 21.91200723706852 27.271213598465817 30.488672146842603 44 17.46810477802473 28.15057839678764 32.40235615124442 21.978960673943213 45 16.3466053962594 41.98613676910386 21.960727294899403 19.706530539737333 46 20.508154307152115 36.80955733928683 24.564700060914728 18.11758829264632 47 20.090252294855432 26.8737142096651 25.65882006000013 27.37721343547934 48 21.547808682019838 23.626062123643415 35.09333320825978 19.73279598607697 49 22.089592141003234 23.449122130221504 36.214949846481986 18.246335882293277 50 19.834164193043996 37.97555554643561 24.220141962392336 17.97013829812806 51 17.8845410846105 36.06128525974944 24.183382063162536 21.870791592477527 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3854.0 1 3766.0 2 3678.0 3 8184.0 4 12690.0 5 9288.0 6 5886.0 7 6065.0 8 6244.0 9 6690.0 10 7136.0 11 7673.0 12 8210.0 13 7907.0 14 7604.0 15 7103.5 16 6603.0 17 6899.5 18 7196.0 19 6039.5 20 4883.0 21 5263.5 22 5644.0 23 5289.5 24 4935.0 25 5936.0 26 8305.5 27 9674.0 28 12524.5 29 15375.0 30 19489.0 31 23603.0 32 26720.5 33 29838.0 34 33991.5 35 38145.0 36 41159.5 37 44174.0 38 58739.0 39 73304.0 40 103955.0 41 134606.0 42 169420.0 43 204234.0 44 205600.5 45 206967.0 46 183083.5 47 159200.0 48 143945.0 49 128690.0 50 117449.5 51 106209.0 52 96237.5 53 86266.0 54 77902.0 55 69538.0 56 63596.0 57 57654.0 58 56329.5 59 55005.0 60 51357.5 61 47710.0 62 43570.5 63 39431.0 64 34036.5 65 28642.0 66 23744.0 67 18846.0 68 16106.0 69 13366.0 70 11139.0 71 8912.0 72 7977.0 73 7042.0 74 5168.0 75 2986.5 76 2679.0 77 1848.5 78 1018.0 79 707.5 80 397.0 81 294.0 82 191.0 83 133.0 84 75.0 85 73.5 86 72.0 87 38.0 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1705663.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.07261349103634 #Duplication Level Percentage of deduplicated Percentage of total 1 78.89070024381326 13.468704332998302 2 7.531728375254594 2.5717257494038557 3 2.680027880603087 1.3726524045221336 4 1.376932252224993 0.9403132858231786 5 0.8073823153087915 0.6892063104382514 6 0.5063817181832114 0.5187155612081314 7 0.40636351217380295 0.4856381026142365 8 0.33203259557612497 0.4534931336557411 9 0.27798704488772935 0.42713688355952156 >10 4.425164445900157 18.865514908668295 >50 1.5397046674966604 18.121356104037556 >100 1.206096041382939 39.155502188950386 >500 0.017371753682470268 1.8133824161260754 >1k 0.0017726279267826803 0.7159107883157284 >5k 3.5452558535653604E-4 0.4007478296785963 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6621 0.3881775004792858 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4517 0.2648237078485023 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3348 0.19628730880601855 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.025972305197451077 0.0 2 0.0 0.0 0.0 0.08829411202564633 0.0 3 0.0 0.0 0.0 0.12481949834170056 0.0 4 0.0 0.0 0.0 0.17998866130062036 0.0 5 0.0 0.0 0.0 0.3343567867744097 0.0 6 0.0 0.0 0.0 0.46181455539576105 0.0 7 0.0 0.0 0.0 0.5648243527590151 0.0 8 0.0 0.0 0.0 0.8172188761789404 0.0 9 0.0 0.0 0.0 0.9223392897659151 0.0 10 0.0 0.0 0.0 1.11780580337382 0.0 11 0.0 0.0 0.0 1.2758088790106838 0.0 12 0.0 0.0 0.0 1.4427234453699236 0.0 13 0.0 0.0 0.0 1.500179109237874 0.0 14 0.0 0.0 0.0 1.5202299633632201 0.0 15 0.0 0.0 0.0 1.556227695623344 0.0 16 0.0 0.0 0.0 1.6404178316584226 0.0 17 0.0 0.0 0.0 1.7389718836604886 0.0 18 0.0 0.0 0.0 1.9010203070594835 0.0 19 0.0 0.0 0.0 1.9732502844934785 0.0 20 0.0 0.0 0.0 2.0470045958668273 0.0 21 0.0 0.0 0.0 2.1402821073095915 0.0 22 0.0 0.0 0.0 2.2375463382860508 0.0 23 0.0 0.0 0.0 2.35849637355093 0.0 24 0.0 0.0 0.0 2.4445626128959823 0.0 25 0.0 0.0 0.0 2.515561397532807 0.0 26 0.0 0.0 0.0 2.5930679155261034 0.0 27 0.0 0.0 0.0 2.6634217896501244 0.0 28 0.0 0.0 0.0 2.741455961699351 0.0 29 0.0 0.0 0.0 2.827346316359093 0.0 30 0.0 0.0 0.0 2.9589666891994493 0.0 31 0.0 0.0 0.0 3.0739952733922236 0.0 32 0.0 0.0 0.0 3.172432068937416 0.0 33 0.0 0.0 0.0 3.2761454050419103 0.0 34 0.0 0.0 0.0 3.3880080648991036 0.0 35 0.0 0.0 0.0 3.5454834864800375 0.0 36 5.862822843668415E-5 0.0 0.0 3.6581669415353444 0.0 37 5.862822843668415E-5 0.0 0.0 3.7767718476627565 0.0 38 5.862822843668415E-5 0.0 0.0 3.8966665748157756 0.0 39 5.862822843668415E-5 0.0 0.0 4.0203135085887425 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCACGA 45 3.8562575E-10 45.0 24 ATTACGC 20 7.0342486E-4 45.0 10 TCTTACG 55 1.8189894E-12 45.0 1 CTAACCG 50 2.1827873E-11 45.0 1 ACCGTTG 40 6.8175723E-9 45.0 10 ACGTAAG 25 3.8916027E-5 45.0 1 CACCGTA 25 3.8916027E-5 45.0 12 CGGTACC 25 3.8916027E-5 45.0 26 TATGTCA 25 3.8916027E-5 45.0 28 CGATAGA 20 7.0342486E-4 45.0 10 ATACCGG 40 6.8175723E-9 45.0 2 TACGTCA 25 3.8916027E-5 45.0 26 ACGGTAC 20 7.0342486E-4 45.0 25 TCGAATA 30 2.1661235E-6 44.999996 44 TTTAGCG 120 0.0 43.124996 1 ATAGCGG 185 0.0 42.56757 2 ACGGGTA 90 0.0 42.5 5 TAGGACG 90 0.0 42.5 1 TTTACGG 240 0.0 42.187496 2 TATTGCG 130 0.0 41.538464 1 >>END_MODULE