##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545225_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2422658 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.114740916794695 31.0 31.0 33.0 28.0 34.0 2 31.39034688346436 31.0 31.0 34.0 30.0 34.0 3 31.477237397932353 31.0 31.0 34.0 30.0 34.0 4 35.26652792098596 37.0 35.0 37.0 33.0 37.0 5 35.12556786801934 37.0 35.0 37.0 32.0 37.0 6 35.116815910458676 37.0 35.0 37.0 32.0 37.0 7 35.77692971934132 37.0 35.0 37.0 35.0 37.0 8 35.8445698897657 37.0 35.0 37.0 35.0 37.0 9 37.43312840689854 39.0 37.0 39.0 35.0 39.0 10 36.65650991596833 39.0 35.0 39.0 32.0 39.0 11 36.37750520296303 38.0 35.0 39.0 32.0 39.0 12 35.858370847226475 37.0 35.0 39.0 31.0 39.0 13 35.625048603641126 37.0 35.0 39.0 30.0 39.0 14 36.47711521807866 38.0 35.0 41.0 30.0 41.0 15 36.75696528358522 38.0 35.0 41.0 31.0 41.0 16 36.588686475763396 38.0 35.0 40.0 31.0 41.0 17 36.64148633443103 38.0 35.0 40.0 31.0 41.0 18 36.63740775627431 38.0 35.0 40.0 31.0 41.0 19 36.55098573550208 38.0 35.0 40.0 31.0 41.0 20 36.427222909713215 38.0 35.0 40.0 31.0 41.0 21 36.32252757095719 38.0 35.0 40.0 30.0 41.0 22 36.21879274746993 38.0 35.0 40.0 30.0 41.0 23 36.109619682183784 38.0 34.0 40.0 30.0 41.0 24 35.89936218814211 38.0 34.0 40.0 30.0 41.0 25 35.855397253760124 37.0 34.0 40.0 30.0 41.0 26 35.72335426626457 37.0 34.0 40.0 29.0 41.0 27 35.70136189259895 37.0 34.0 40.0 29.0 41.0 28 35.65898570908482 37.0 34.0 40.0 29.0 41.0 29 35.59512320765044 37.0 34.0 40.0 29.0 41.0 30 35.480821890667194 37.0 34.0 40.0 29.0 41.0 31 35.37232494227415 37.0 34.0 40.0 28.0 41.0 32 35.2000451570135 37.0 34.0 40.0 27.0 41.0 33 34.979527444649634 37.0 34.0 40.0 26.0 41.0 34 34.745132412416446 37.0 34.0 40.0 25.0 41.0 35 34.54794403502269 37.0 33.0 40.0 24.0 41.0 36 34.38296862371825 37.0 33.0 40.0 23.0 41.0 37 34.18999586404684 36.0 33.0 40.0 23.0 41.0 38 34.199647246949425 36.0 33.0 40.0 23.0 41.0 39 34.14619686311481 36.0 33.0 40.0 23.0 41.0 40 34.0147020338818 36.0 33.0 40.0 23.0 41.0 41 33.944287225023096 36.0 33.0 40.0 23.0 41.0 42 33.85250291209077 36.0 33.0 40.0 23.0 41.0 43 33.71157381685735 35.0 33.0 40.0 23.0 41.0 44 33.65341579372738 35.0 32.0 40.0 23.0 41.0 45 33.6264821530732 35.0 32.0 40.0 23.0 41.0 46 33.49778879230993 35.0 32.0 40.0 22.0 41.0 47 33.492706770827745 35.0 32.0 40.0 22.0 41.0 48 33.428239148901746 35.0 32.0 39.0 22.0 41.0 49 33.37315254567504 35.0 32.0 39.0 22.0 41.0 50 33.20344926935622 35.0 32.0 39.0 21.0 41.0 51 33.04958314380321 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 2.0 12 8.0 13 15.0 14 30.0 15 101.0 16 296.0 17 851.0 18 1788.0 19 3477.0 20 5787.0 21 8978.0 22 13553.0 23 18800.0 24 26478.0 25 36028.0 26 46407.0 27 53858.0 28 59105.0 29 66118.0 30 76614.0 31 92476.0 32 111534.0 33 141638.0 34 210762.0 35 276178.0 36 197577.0 37 240503.0 38 316827.0 39 416653.0 40 213.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.653732388145585 22.64413714193254 25.27542063304024 16.42670983688164 2 35.05348257987714 24.988834577559025 27.00141745141081 12.956265391153025 3 29.65515561833325 25.2859462623284 31.419746410760414 13.639151708577934 4 26.444591023578234 27.84846230875344 30.498568101647034 15.208378566021288 5 22.968615462851133 31.82913147460351 30.19881469031122 15.003438372234132 6 21.042590411027888 40.76406987696984 28.120931637895236 10.072408074107035 7 83.69509852401784 4.947912581965759 9.15989793028979 2.197090963726618 8 84.30092072426237 4.412054858754311 8.955411783256242 2.331612633727088 9 79.35053152364057 6.128681803209533 10.733623978291613 3.7871626948582917 10 44.00720200705176 25.338037808060403 17.49078904244842 13.16397114243942 11 35.65183364717595 24.71289798229878 24.321881173487963 15.313387197037304 12 32.40853640918363 22.466357199406602 29.173370735778636 15.951735655631131 13 22.54284343890058 31.52619973599245 29.014825864814597 16.91613096029237 14 18.58487661073086 33.543405631335496 30.725550201472927 17.146167556460714 15 17.59918238562769 24.67058908025813 40.78966160308223 16.94056693103195 16 19.807830903082483 21.60292538195651 38.87478133521116 19.714462379749843 17 19.896947897722253 21.947464313989016 30.676843367904176 27.478744420384555 18 22.058458106757122 23.7981176047135 33.90936731474273 20.234056973786643 19 27.918426785786522 24.419377394580664 27.841981823270146 19.820213996362675 20 29.264180086500037 23.77009053692267 27.989092971438804 18.97663640513849 21 23.856896020816805 26.75949308569348 29.99156298577843 19.392047907711284 22 22.901168881451696 24.576725233194285 27.993881100840483 24.52822478451354 23 21.829659819916802 27.866871840763324 27.910295221199195 22.393173118120675 24 20.77168960703492 24.54217640294255 35.99802365831248 18.688110331710046 25 21.09476451071509 25.8381083916921 32.95553891634725 20.11158818124556 26 19.856248797808025 30.375397600486735 28.385228125472107 21.38312547623313 27 19.837839265798145 30.44168842651336 29.542056699707516 20.178415607980988 28 19.402490983044242 27.422318792004486 33.87766659594544 19.297523629005827 29 19.40822848293073 25.619670626229542 34.10700148349458 20.865099407345156 30 20.797446441057716 28.632270836411912 30.861888058487825 19.708394664042554 31 26.199653438496068 26.86726727420874 27.797567795371858 19.135511491923335 32 27.758726159449665 25.71592853799422 27.667380208019456 18.85796509453666 33 26.751485352038955 26.594261344358138 26.41557330832499 20.238679995277913 34 21.512941570787127 26.475177263980303 28.661783875396363 23.350097289836206 35 21.90247240840432 26.229496693301325 30.373416305561907 21.494614592732443 36 27.123556028131084 27.256591726937934 26.409175376796888 19.21067686813409 37 21.657699931232553 32.04534028327564 27.192117087925745 19.104842697566063 38 21.615060813371098 31.613087773841787 26.110577720833895 20.66127369195322 39 21.68717169323941 30.902710989334853 26.684203878549923 20.72591343887581 40 24.463667591546145 26.506341382068786 27.77750718425795 21.252483842127116 41 19.7699799146227 25.93746207677683 28.40594916822762 25.886608840372848 42 21.04535596852713 27.30719730147631 26.509891202142438 25.137555527854115 43 20.867163256225187 26.479676454538776 28.011960417029556 24.641199872206478 44 20.133423702396293 28.100871026781327 30.386955154214917 21.378750116607463 45 19.940660217001327 32.28462292242653 26.276428616833247 21.4982882437389 46 21.347049397810174 31.17749182922228 27.524231649700454 19.95122712326709 47 21.449127363416544 28.594502401907327 27.694705567191075 22.26166466748505 48 21.567839950995975 27.024037235135957 30.381547870149234 21.02657494371884 49 21.60271899706851 27.353386239411424 30.934246600221737 20.109648163298328 50 20.16190481694073 31.358986699732277 28.1575030400494 20.32160544327759 51 19.912715703165695 31.48141421529576 26.93929560012185 21.666574481416692 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5692.0 1 5493.0 2 5294.0 3 19235.5 4 33177.0 5 23726.0 6 14275.0 7 14328.0 8 14381.0 9 14763.5 10 15146.0 11 15485.5 12 15825.0 13 15493.0 14 15161.0 15 14752.0 16 14343.0 17 13486.5 18 12630.0 19 12363.0 20 12096.0 21 12233.0 22 12370.0 23 13071.5 24 13773.0 25 15908.0 26 22022.0 27 26001.0 28 30209.5 29 34418.0 30 38054.0 31 41690.0 32 52417.5 33 63145.0 34 69903.0 35 76661.0 36 79009.5 37 81358.0 38 95242.0 39 109126.0 40 130333.0 41 151540.0 42 166689.5 43 181839.0 44 190803.5 45 199768.0 46 192122.5 47 184477.0 48 173333.5 49 162190.0 50 151140.0 51 140090.0 52 129506.5 53 118923.0 54 110888.5 55 102854.0 56 100950.0 57 99046.0 58 97454.5 59 95863.0 60 92196.0 61 88529.0 62 79613.0 63 70697.0 64 62929.0 65 55161.0 66 48328.5 67 41496.0 68 36413.0 69 31330.0 70 27161.5 71 22993.0 72 20039.5 73 17086.0 74 14370.5 75 8731.5 76 5808.0 77 4739.0 78 3670.0 79 2645.5 80 1621.0 81 1248.5 82 876.0 83 587.0 84 298.0 85 223.0 86 148.0 87 102.0 88 56.0 89 40.5 90 25.0 91 17.0 92 9.0 93 5.0 94 1.0 95 1.5 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2422658.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.420600457836724 #Duplication Level Percentage of deduplicated Percentage of total 1 77.67990132629232 16.63950129914689 2 6.218139931543516 2.663925821290277 3 2.5372441024240375 1.6304787654608361 4 1.5741164405899566 1.3487407739195818 5 1.1409252197706599 1.221965164248843 6 0.85331294473063 1.0967085392744962 7 0.6688059233879255 1.0028357128109118 8 0.5205695212368757 0.8920729379953971 9 0.47794455866195784 0.9214073488885416 >10 6.331154217782349 32.67778269252855 >50 1.4367301732077407 21.454390348986514 >100 0.5559855494483827 16.342089286690207 >500 0.003181594414602108 0.5001480151832552 >1k 0.0017896468582136857 0.7481348781024267 >5k 0.0 0.0 >10k+ 1.9884965091263176E-4 0.859818415473445 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20186 0.8332170698464249 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4859 0.2005648341614871 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3053 0.12601861261473968 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.255395520127067E-5 0.0 0.0 0.02080359671072021 0.0 2 8.255395520127067E-5 0.0 0.0 0.06088354196093712 0.0 3 8.255395520127067E-5 0.0 0.0 0.09935368508472925 0.0 4 8.255395520127067E-5 0.0 0.0 0.14929882798149802 0.0 5 8.255395520127067E-5 0.0 0.0 0.2797753541771063 0.0 6 1.2383093280190601E-4 0.0 0.0 0.4642421670743456 0.0 7 1.2383093280190601E-4 0.0 0.0 0.5891463012938681 0.0 8 1.2383093280190601E-4 0.0 0.0 0.8576117636084004 0.0 9 1.6510791040254133E-4 0.0 0.0 0.9878406279384049 0.0 10 2.0638488800317668E-4 0.0 0.0 1.197114904373626 0.0 11 2.0638488800317668E-4 0.0 0.0 1.353430818547232 0.0 12 2.0638488800317668E-4 0.0 0.0 1.4898099525397313 0.0 13 2.0638488800317668E-4 0.0 0.0 1.5514777570750804 0.0 14 2.4766186560381203E-4 0.0 0.0 1.5828895370291638 0.0 15 2.4766186560381203E-4 0.0 0.0 1.6204928636233427 0.0 16 2.4766186560381203E-4 0.0 0.0 1.6861645349859535 0.0 17 2.4766186560381203E-4 0.0 0.0 1.7566656127278386 0.0 18 2.4766186560381203E-4 0.0 0.0 1.8726126428080232 0.0 19 2.4766186560381203E-4 0.0 0.0 1.931721274732133 0.0 20 2.4766186560381203E-4 0.0 0.0 1.9955354821027154 0.0 21 2.889388432044473E-4 0.0 0.0 2.073094923014309 0.0 22 2.889388432044473E-4 0.0 0.0 2.159239975266835 0.0 23 2.889388432044473E-4 0.0 0.0 2.260120908522788 0.0 24 2.889388432044473E-4 0.0 0.0 2.3409412306648316 0.0 25 2.889388432044473E-4 0.0 0.0 2.414620635681966 0.0 26 2.889388432044473E-4 0.0 0.0 2.48636002275187 0.0 27 2.889388432044473E-4 0.0 0.0 2.5658182046330933 0.0 28 3.3021582080508267E-4 0.0 0.0 2.6435427534550895 0.0 29 3.3021582080508267E-4 0.0 0.0 2.734145719288484 0.0 30 3.3021582080508267E-4 0.0 0.0 2.8560366341431602 0.0 31 3.3021582080508267E-4 0.0 0.0 2.952046884042238 0.0 32 3.3021582080508267E-4 0.0 0.0 3.049501828157338 0.0 33 3.3021582080508267E-4 0.0 0.0 3.145966124810023 0.0 34 3.71492798405718E-4 0.0 0.0 3.248374306237199 0.0 35 3.71492798405718E-4 0.0 0.0 3.3740627030311336 0.0 36 4.1276977600635336E-4 0.0 0.0 3.4795666577783573 0.0 37 4.1276977600635336E-4 0.0 0.0 3.592830684314501 0.0 38 4.953237312076241E-4 0.0 0.0 3.721945070249288 0.0 39 4.953237312076241E-4 0.0 0.0 3.9068659299001345 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12645 0.0 41.04982 1 GCGATCG 115 0.0 39.130432 9 CGAATAT 505 0.0 38.76238 14 GCGATAT 235 0.0 38.29787 9 AGGGCGA 2170 0.0 38.26037 6 GGGCGAT 3825 0.0 38.235294 7 TAGGGAC 1440 0.0 38.125004 5 TTACGGG 575 0.0 37.565216 3 CTATACG 30 1.1402954E-4 37.499996 1 CGTAGCA 30 1.1402954E-4 37.499996 39 TACGGGA 485 0.0 37.113403 4 ACGTATA 85 0.0 37.058826 13 CCTATGC 510 0.0 37.058823 35 GTTGATC 825 0.0 36.81818 16 CGGTCTA 220 0.0 36.81818 31 GGCGATA 1090 0.0 36.74312 8 ATAGGGA 2190 0.0 36.267124 4 ATAGGGC 1135 0.0 36.079296 4 GTCGAAC 25 0.0021075679 36.000004 32 TAGGGCG 950 0.0 36.0 5 >>END_MODULE