##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545223_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1820136 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.268217320024437 31.0 31.0 34.0 30.0 34.0 2 31.50589571328736 31.0 31.0 34.0 30.0 34.0 3 31.58789233332015 31.0 31.0 34.0 30.0 34.0 4 35.32279346158749 37.0 35.0 37.0 33.0 37.0 5 35.16937360724693 37.0 35.0 37.0 32.0 37.0 6 35.159853988932696 37.0 35.0 37.0 32.0 37.0 7 35.8537147773573 37.0 35.0 37.0 35.0 37.0 8 35.97908123349024 37.0 35.0 37.0 35.0 37.0 9 37.696250170316944 39.0 37.0 39.0 35.0 39.0 10 36.90583450906965 39.0 37.0 39.0 32.0 39.0 11 36.402892421225665 38.0 35.0 39.0 32.0 39.0 12 34.88736665831564 35.0 34.0 39.0 30.0 39.0 13 34.138837427532884 35.0 33.0 39.0 25.0 39.0 14 34.75977344550078 35.0 33.0 40.0 25.0 41.0 15 35.457684480720125 35.0 33.0 40.0 30.0 41.0 16 35.5436236632867 35.0 34.0 40.0 31.0 41.0 17 35.67098942057077 35.0 34.0 40.0 31.0 41.0 18 35.78655935600417 36.0 34.0 40.0 31.0 41.0 19 35.661111037856514 36.0 34.0 40.0 31.0 41.0 20 35.4574592228273 35.0 34.0 40.0 30.0 41.0 21 35.27465475107355 35.0 34.0 40.0 30.0 41.0 22 35.14364146415433 35.0 34.0 40.0 30.0 41.0 23 35.16743474114022 35.0 34.0 39.0 30.0 41.0 24 35.025717309036246 35.0 34.0 39.0 29.0 41.0 25 35.00790820026636 35.0 34.0 39.0 29.0 41.0 26 34.8236071370491 35.0 34.0 39.0 29.0 41.0 27 34.743402141378446 35.0 34.0 39.0 29.0 41.0 28 34.897924660574816 35.0 34.0 39.0 29.0 41.0 29 34.99119186698137 35.0 34.0 39.0 29.0 41.0 30 34.941286804942045 35.0 34.0 39.0 29.0 41.0 31 34.71263356144816 35.0 34.0 39.0 29.0 41.0 32 34.5206149430592 35.0 34.0 39.0 29.0 41.0 33 34.295141132310995 35.0 33.0 39.0 27.0 41.0 34 34.17247117797791 35.0 34.0 39.0 27.0 41.0 35 33.98516484482478 35.0 33.0 39.0 25.0 41.0 36 33.65879692506494 35.0 33.0 39.0 23.0 41.0 37 33.476514392331126 35.0 33.0 39.0 23.0 41.0 38 33.62617134104265 35.0 33.0 39.0 24.0 41.0 39 33.674246869464696 35.0 33.0 39.0 24.0 41.0 40 33.479848758554304 35.0 33.0 39.0 23.0 41.0 41 33.60538333399263 35.0 33.0 38.0 23.0 41.0 42 33.57846831225798 35.0 33.0 38.0 23.0 41.0 43 33.44548484289086 35.0 33.0 38.0 23.0 41.0 44 33.40831948821407 35.0 33.0 38.0 23.0 41.0 45 33.34513629750744 35.0 33.0 38.0 23.0 40.0 46 33.31703894654026 35.0 33.0 38.0 23.0 40.0 47 33.37501648228484 35.0 33.0 38.0 23.0 40.0 48 33.413736665831564 35.0 33.0 38.0 23.0 40.0 49 33.442261457385605 35.0 33.0 38.0 24.0 40.0 50 33.1794162634001 35.0 32.0 38.0 24.0 40.0 51 32.93318411371458 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 2.0 13 8.0 14 10.0 15 54.0 16 160.0 17 534.0 18 1094.0 19 2186.0 20 4043.0 21 6405.0 22 9427.0 23 13634.0 24 19436.0 25 26898.0 26 34355.0 27 40134.0 28 44959.0 29 51057.0 30 61736.0 31 76413.0 32 95857.0 33 128832.0 34 232915.0 35 359932.0 36 101497.0 37 113996.0 38 156840.0 39 237505.0 40 215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.425583582765242 25.080598372868838 30.05753416228238 14.436283882083536 2 28.903829164414084 27.346033483212246 31.554125625777413 12.196011726596254 3 26.76085743043377 26.872607321650687 32.55058962626969 13.815945621645856 4 24.11484636312891 29.264901084314577 32.88188355155878 13.738369000997727 5 21.588606565663227 33.184882887872114 31.285079796235003 13.941430750229653 6 20.73202222251524 40.39890425770382 28.27332682832492 10.595746691456023 7 87.10398563623816 5.260321206766967 5.775447548974362 1.8602456080204994 8 90.155076323967 3.3357946878694777 5.352237415226115 1.156891572937407 9 87.45209149206433 4.326819534364465 6.287442257062109 1.933646716509096 10 63.94230980542114 19.425196798480993 9.935521301704927 6.696972094392946 11 58.75434582910288 15.514554956332931 16.985543937376107 8.745555277188078 12 51.60795676806569 21.322967074987805 18.4664772302729 8.602598926673611 13 18.67717577148081 54.08579358905049 17.858335860617007 9.37869477885169 14 10.696947920375182 53.24618599928797 25.45348259690485 10.603383483432008 15 8.621333790442034 21.910395706694445 59.135031667963275 10.33323883490025 16 10.181766637218317 15.134473467916685 55.74561461341351 18.938145281451497 17 11.25327997468321 15.47378877182804 29.837275895867123 43.43565535762163 18 18.995558573645045 21.128970582418017 41.176153869820716 18.699316974116222 19 34.3600697969822 20.71521029197818 25.169273065309405 19.75544684573021 20 34.97551831291727 21.324285657775025 25.423924366091327 18.276271663216377 21 18.33577271148969 32.93819802476298 28.69417450124606 20.031854762501265 22 20.21925834113495 25.845870858001817 21.129574932862162 32.805295868001075 23 14.58726161122026 34.703176026406815 24.444876646580255 26.26468571579267 24 14.765819696989677 20.909536430244774 49.99313238131656 14.331511491448989 25 11.447166585354061 25.71340822883565 44.92400567869654 17.915419507113754 26 11.504305172800274 41.4542100150758 27.739685386146967 19.30179942597696 27 12.283972186693742 44.96977148960297 27.5382169244496 15.208039399253682 28 9.743557624265438 31.716860718100186 44.445195304087164 14.09438635354721 29 10.135396475867738 24.48789541001332 42.841798634827285 22.534909479291656 30 15.273583951968424 38.11572322068241 31.203877072922026 15.406815754427141 31 33.62435554266275 28.344750062632684 23.882006619285594 14.14888777541898 32 37.51324076882167 22.602926374732437 25.88910938523275 13.994723471213142 33 34.03646760461855 26.213315928040544 21.954348466268456 17.79586800107245 34 18.308741764351673 25.695387597410303 26.996444221750465 28.999426416487562 35 19.638972032859083 24.024578383153784 33.97553809165908 22.360911492328047 36 36.71538830065445 24.37076130574858 24.004689759446546 14.909160634150414 37 18.564052356527206 39.93619158128843 27.797812910683596 13.701943151500767 38 17.01636581002738 40.97501505382015 22.576280014240695 19.432339121911767 39 19.02044682375383 38.98494398220792 25.731264037412586 16.263345156625657 40 27.660845123661087 24.024908028850593 23.75970806577091 24.55453878171741 41 14.198279688990272 22.290477195110693 26.351107829305064 37.16013528659397 42 17.917122676547248 22.672151971061503 24.39729778434139 35.01342756804986 43 18.204408901312867 23.387428192179048 27.98807341868959 30.42008948781849 44 14.726976445716144 30.91708531670161 33.66231973874479 20.69361849883745 45 13.03622366680292 48.15118210946874 20.60038370759108 18.212210516137255 46 19.746711234764874 40.04766676775801 23.276722179002007 16.928899818475102 47 18.79447469859395 27.1005573209914 27.108798463411528 26.99616951700313 48 20.72273720205523 23.544064839110924 37.13096164242672 18.602236316407126 49 20.583461895155086 24.464600447439093 37.0777238623927 17.87421379501312 50 18.990449065344567 41.32075844881921 23.772344484148437 15.916448001687785 51 15.528235252750344 39.376178483366076 23.134370178931686 21.961216084951893 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6914.0 1 5508.0 2 4102.0 3 7546.0 4 10990.0 5 8187.0 6 5384.0 7 5735.0 8 6086.0 9 7051.0 10 8016.0 11 8596.0 12 9176.0 13 9131.5 14 9087.0 15 8542.0 16 7997.0 17 7706.0 18 7415.0 19 6804.0 20 6193.0 21 6539.0 22 6885.0 23 6265.5 24 5646.0 25 5837.5 26 9033.5 27 12038.0 28 15017.0 29 17996.0 30 23040.5 31 28085.0 32 32340.5 33 36596.0 34 43652.0 35 50708.0 36 52628.0 37 54548.0 38 70469.5 39 86391.0 40 135660.5 41 184930.0 42 229514.5 43 274099.0 44 264906.5 45 255714.0 46 226189.5 47 196665.0 48 171401.0 49 146137.0 50 129145.5 51 112154.0 52 95719.5 53 79285.0 54 66970.0 55 54655.0 56 45120.0 57 35585.0 58 31040.5 59 26496.0 60 23891.0 61 21286.0 62 19006.0 63 16726.0 64 13696.0 65 10666.0 66 9114.5 67 7563.0 68 6010.5 69 4458.0 70 3942.0 71 3426.0 72 2690.0 73 1954.0 74 1325.5 75 684.5 76 672.0 77 507.0 78 342.0 79 260.0 80 178.0 81 112.5 82 47.0 83 74.0 84 101.0 85 56.5 86 12.0 87 7.0 88 2.0 89 1.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1820136.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.091371785110965 #Duplication Level Percentage of deduplicated Percentage of total 1 79.16768767138583 12.739166956878153 2 8.493747201046482 2.7335208812156915 3 3.020133626124566 1.4579427905605713 4 1.5335878985643336 0.9871013216378295 5 0.8535761931939225 0.6867605935801555 6 0.5892027622745364 0.5688648422744349 7 0.4053264128688855 0.4565580602659035 8 0.3105502784042494 0.3997743990217995 9 0.26177671104096756 0.3791111743839394 >10 2.745482908448892 10.644840644329825 >50 1.162442181654793 13.788535125062317 >100 1.4092982573211434 48.66497428015333 >500 0.04120137333997341 4.309526338104913 >1k 0.0049300788611934 1.0857680818969686 >5k 0.0010564454702557285 1.0975545106342248 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6613 0.36332449882865897 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6485 0.3562920572968174 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6271 0.34453469411076976 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3240 0.1780086762747399 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1964 0.1079040247541942 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04098594830276419 0.0 2 0.0 0.0 0.0 0.11740880901207382 0.0 3 0.0 0.0 0.0 0.1681742463200552 0.0 4 5.4940949467512315E-5 0.0 0.0 0.22729070794709846 0.0 5 5.4940949467512315E-5 0.0 0.0 0.3920586154001679 0.0 6 5.4940949467512315E-5 0.0 0.0 0.5350149659146349 0.0 7 5.4940949467512315E-5 0.0 0.0 0.63561184438965 0.0 8 5.4940949467512315E-5 0.0 0.0 0.8962517086635284 0.0 9 5.4940949467512315E-5 0.0 0.0 1.0161878013511079 0.0 10 5.4940949467512315E-5 0.0 0.0 1.239907347582818 0.0 11 5.4940949467512315E-5 0.0 0.0 1.451045416386468 0.0 12 5.4940949467512315E-5 0.0 0.0 1.6456462594003964 0.0 13 5.4940949467512315E-5 0.0 0.0 1.7194319545352654 0.0 14 5.4940949467512315E-5 0.0 0.0 1.7452542007849963 0.0 15 5.4940949467512315E-5 0.0 0.0 1.7851413300984103 0.0 16 5.4940949467512315E-5 0.0 0.0 1.8837053934431274 0.0 17 5.4940949467512315E-5 0.0 0.0 2.011168396207756 0.0 18 5.4940949467512315E-5 0.0 0.0 2.214724613984889 0.0 19 5.4940949467512315E-5 0.0 0.0 2.2949933411569243 0.0 20 5.4940949467512315E-5 0.0 0.0 2.38608543537406 0.0 21 5.4940949467512315E-5 0.0 0.0 2.505856705213237 0.0 22 5.4940949467512315E-5 0.0 0.0 2.625902679799751 0.0 23 5.4940949467512315E-5 0.0 0.0 2.7766057041891377 0.0 24 5.4940949467512315E-5 0.0 0.0 2.8836306737518513 0.0 25 5.4940949467512315E-5 0.0 0.0 2.964229046620692 0.0 26 5.4940949467512315E-5 0.0 0.0 3.0475744669629083 0.0 27 1.0988189893502463E-4 0.0 0.0 3.1317989424966046 0.0 28 1.0988189893502463E-4 0.0 0.0 3.2188803474026115 0.0 29 1.0988189893502463E-4 0.0 0.0 3.3152467727686283 0.0 30 1.0988189893502463E-4 0.0 0.0 3.4693561360250005 0.0 31 1.6482284840253696E-4 0.0 0.0 3.5969839616380312 0.0 32 1.6482284840253696E-4 0.0 0.0 3.6924163908631003 0.0 33 1.6482284840253696E-4 0.0 0.0 3.800155592768892 0.0 34 1.6482284840253696E-4 0.0 0.0 3.9173995789325633 0.0 35 1.6482284840253696E-4 0.0 0.0 4.096836719893458 0.0 36 1.6482284840253696E-4 0.0 0.0 4.221552675184712 0.0 37 2.1976379787004926E-4 0.0 0.0 4.344345697244601 0.0 38 2.1976379787004926E-4 0.0 0.0 4.466864014557154 0.0 39 2.1976379787004926E-4 0.0 0.0 4.5932831392819 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTACG 20 7.0343725E-4 45.000004 25 TACCCCG 60 0.0 45.000004 6 TTAGCTA 20 7.0343725E-4 45.000004 18 CGACGGT 185 0.0 45.000004 28 TCTTCGA 20 7.0343725E-4 45.000004 25 CGCATTA 20 7.0343725E-4 45.000004 38 GGCCGTA 20 7.0343725E-4 45.000004 8 CCTACGG 40 6.8193913E-9 45.000004 2 TATATCG 30 2.1662036E-6 45.000004 11 CGCGAGG 60 0.0 45.000004 2 ATATCGA 30 2.1662036E-6 45.000004 12 ACGTGTG 20 7.0343725E-4 45.000004 2 GTCCGCG 20 7.0343725E-4 45.000004 40 TCGTACC 20 7.0343725E-4 45.000004 30 ACGTCGT 20 7.0343725E-4 45.000004 29 TAAGCGA 20 7.0343725E-4 45.000004 1 ATACCGG 40 6.8193913E-9 45.000004 2 AAATCGG 95 0.0 45.0 2 CGACGTC 45 3.8562575E-10 45.0 18 TCACACG 25 3.8917067E-5 45.0 15 >>END_MODULE