##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545222_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4729754 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.366270000511655 31.0 31.0 34.0 30.0 34.0 2 31.61905989190981 31.0 31.0 34.0 30.0 34.0 3 31.700168127137268 31.0 31.0 34.0 30.0 34.0 4 35.45193280665337 37.0 35.0 37.0 33.0 37.0 5 35.31683888844959 37.0 35.0 37.0 33.0 37.0 6 35.31254458477122 37.0 35.0 37.0 33.0 37.0 7 35.92363640899717 37.0 35.0 37.0 35.0 37.0 8 36.01666069736397 37.0 35.0 37.0 35.0 37.0 9 37.688733917239674 39.0 38.0 39.0 35.0 39.0 10 36.93190026373465 39.0 37.0 39.0 32.0 39.0 11 36.5635373425341 39.0 35.0 39.0 32.0 39.0 12 35.53057283740338 37.0 35.0 39.0 31.0 39.0 13 35.0391995017077 37.0 34.0 39.0 30.0 39.0 14 35.81669384919385 38.0 34.0 40.0 29.0 41.0 15 36.303680487399554 38.0 35.0 40.0 31.0 41.0 16 36.25969511310736 37.0 35.0 40.0 31.0 41.0 17 36.34859656548734 37.0 35.0 40.0 31.0 41.0 18 36.45429593167002 37.0 35.0 40.0 31.0 41.0 19 36.380280665759784 37.0 35.0 40.0 31.0 41.0 20 36.24823236049909 37.0 35.0 40.0 31.0 41.0 21 36.089268701924034 36.0 34.0 40.0 31.0 41.0 22 35.97925663787165 36.0 34.0 40.0 30.0 41.0 23 35.95374748877003 36.0 34.0 40.0 31.0 41.0 24 35.783744355414676 36.0 34.0 40.0 30.0 41.0 25 35.76094105528533 36.0 34.0 40.0 30.0 41.0 26 35.631640038784255 36.0 34.0 40.0 30.0 41.0 27 35.58116933777106 36.0 34.0 40.0 30.0 41.0 28 35.65647346563902 36.0 34.0 40.0 30.0 41.0 29 35.69914058955286 36.0 34.0 40.0 30.0 41.0 30 35.62708356502262 36.0 34.0 40.0 30.0 41.0 31 35.49921623830753 36.0 34.0 40.0 30.0 41.0 32 35.349574417612416 36.0 34.0 40.0 29.0 41.0 33 35.170560879064745 36.0 34.0 40.0 29.0 41.0 34 35.0299349606766 35.0 34.0 40.0 28.0 41.0 35 34.87896389537384 35.0 34.0 40.0 27.0 41.0 36 34.64165472453747 35.0 33.0 40.0 26.0 41.0 37 34.466972278050825 35.0 33.0 40.0 26.0 41.0 38 34.55215450951572 35.0 33.0 40.0 27.0 41.0 39 34.54988906399783 35.0 33.0 40.0 27.0 41.0 40 34.39153960227107 35.0 33.0 40.0 25.0 41.0 41 34.43965817249692 35.0 34.0 40.0 26.0 41.0 42 34.38467730034162 35.0 33.0 40.0 26.0 41.0 43 34.2599921687259 35.0 33.0 40.0 26.0 41.0 44 34.22932334324364 35.0 33.0 40.0 26.0 41.0 45 34.156747264234035 35.0 33.0 39.0 26.0 41.0 46 34.11240563462709 35.0 33.0 39.0 25.0 41.0 47 34.13975018573905 35.0 33.0 39.0 26.0 41.0 48 34.13191468308923 35.0 33.0 39.0 26.0 41.0 49 34.11114975535725 35.0 33.0 39.0 26.0 41.0 50 33.89282930993874 35.0 33.0 39.0 24.0 41.0 51 33.709900557196 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 7.0 12 5.0 13 10.0 14 37.0 15 110.0 16 312.0 17 818.0 18 1913.0 19 3949.0 20 7158.0 21 11887.0 22 18426.0 23 26805.0 24 38183.0 25 52728.0 26 70278.0 27 84620.0 28 97272.0 29 113534.0 30 139995.0 31 174243.0 32 222868.0 33 300458.0 34 523463.0 35 778559.0 36 327571.0 37 392479.0 38 543566.0 39 797904.0 40 592.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.15166074176374 24.512522215743143 29.029120753426074 13.306696289067045 2 30.692822501973676 26.57848590011235 29.67257916585091 13.056112432063063 3 29.060264022188047 26.514888512172092 30.922263610327306 13.502583855312558 4 26.37765093068265 28.3409242848571 29.833306341090886 15.44811844336936 5 23.325103166042037 33.269256709757 28.74623077648436 14.659409347716604 6 21.582623536023227 41.57463580558312 26.88645117695339 9.956289481440262 7 87.75600168634563 4.76409555338396 6.009149735905927 1.4707530243644806 8 89.5592244332369 3.600969521882111 5.365522181491891 1.4742838633890896 9 85.35209230754919 5.081765351855508 6.921903337890301 2.644239002705003 10 54.947149471198706 22.20713804565734 12.698102269166641 10.147610213977302 11 49.10741658022806 19.474226355112762 19.10674424082098 12.311612823838196 12 43.70077175261123 22.261305767699547 22.471147548054297 11.566774931634923 13 20.75247465301578 43.85185783446666 21.907418440789943 13.48824907172762 14 13.764246512609324 45.255123205139206 26.78046257796917 14.200167704282293 15 13.214788760683959 23.757028378220095 49.798911317586494 13.229271543509451 16 14.830665611784461 18.267567404139832 47.7036014980906 19.198165485985104 17 15.197809442097835 18.684777263257242 28.8087287414948 37.30868455315012 18 20.270018271563384 22.82141946494469 37.29432862681653 19.614233636675397 19 31.626443996875945 22.510198204811495 25.66175746138171 20.20160033693084 20 33.218894682471856 22.30585353910584 25.881494048104827 18.593757730317474 21 21.48978572669953 31.32680896300315 27.38544118785036 19.79796412244696 22 21.53255750721919 25.22676655064936 23.13023045173174 30.110445490399712 23 18.067366717169644 32.28643603874535 25.317003801889058 24.329193442195937 24 17.350289253944283 23.354893298890385 42.92176717858899 16.373050268576335 25 15.92184286962916 25.990083205173036 39.385198469095855 18.702875456101946 26 15.87503282411728 37.09051252982714 26.800463618192406 20.233991027863183 27 16.233106415259652 38.95583152950449 27.53773240637885 17.273329648857004 28 13.943008452448055 30.499302923576998 38.74400233077661 16.813686293198334 29 14.687486917924272 25.16171031305222 38.50052243731915 21.650280331704355 30 17.895729883626082 34.669688952110405 29.780491754962306 17.654089409301204 31 30.89076091483828 27.670445439657115 24.32037691600874 17.11841672949587 32 33.124090597523676 24.603076608212604 26.49425318948935 15.77857960477437 33 31.72731605068678 26.48399895639393 22.78539222124449 19.003292771674808 34 19.655631138532787 26.292339939878477 26.996562611924425 27.055466309664304 35 21.239053870454995 24.220160287406067 32.76464272771903 21.776143114419906 36 32.620914322393936 26.385579461426534 23.99649114943399 16.997015066745544 37 20.33630078858224 37.05319557845926 26.639715300203775 15.970788332754726 38 19.584887501548707 37.574596902925606 23.015594468549526 19.82492112697616 39 20.78427334698591 35.38285500683545 25.606194317928587 18.22667732825005 40 26.6773916782987 25.52361074170031 25.04836403753768 22.75063354246331 41 16.98003743957931 24.49133718159549 26.87993921036908 31.64868616845612 42 18.931090285033854 25.203805525615074 24.740906186664255 31.12419800268682 43 19.540868298858673 25.04764518408357 27.064705690824514 28.346780826233246 44 17.176665002027587 29.860284488368737 31.768523267806316 21.194527241797353 45 16.23729267949242 40.95270071128435 23.363604111334332 19.446402497888897 46 20.30811750463132 36.25414767871648 25.050034314681056 18.38770050197114 47 20.354166411191787 27.78933111531805 26.59580181125699 25.26070066223317 48 21.160994842437894 24.923727534243852 33.91150998550876 20.003767637809496 49 20.47294637310947 26.123620805648667 34.97860565264071 18.42482716860116 50 18.760996872141764 37.35310546806451 26.117299123802212 17.76859853599151 51 17.74439008878686 36.05229785735157 25.293556493635823 20.909755560225754 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9390.0 1 9687.0 2 9984.0 3 18959.0 4 27934.0 5 21276.5 6 14619.0 7 14991.5 8 15364.0 9 16487.5 10 17611.0 11 18888.5 12 20166.0 13 19987.0 14 19808.0 15 19174.0 16 18540.0 17 18376.0 18 18212.0 19 18977.5 20 19743.0 21 19084.5 22 18426.0 23 19924.0 24 21422.0 25 23971.5 26 32164.0 27 37807.0 28 49762.5 29 61718.0 30 78459.0 31 95200.0 32 111072.0 33 126944.0 34 136667.0 35 146390.0 36 151087.5 37 155785.0 38 191858.0 39 227931.0 40 305129.0 41 382327.0 42 462210.0 43 542093.0 44 543145.0 45 544197.0 46 485593.5 47 426990.0 48 390381.5 49 353773.0 50 320099.5 51 286426.0 52 258600.0 53 230774.0 54 201071.0 55 171368.0 56 158071.0 57 144774.0 58 134757.0 59 124740.0 60 119128.5 61 113517.0 62 101215.0 63 88913.0 64 79447.0 65 69981.0 66 57951.5 67 45922.0 68 39392.5 69 32863.0 70 27533.0 71 22203.0 72 19259.0 73 16315.0 74 13712.0 75 8648.0 76 6187.0 77 4498.5 78 2810.0 79 2350.0 80 1890.0 81 1207.5 82 525.0 83 465.0 84 405.0 85 254.0 86 103.0 87 62.0 88 21.0 89 12.5 90 4.0 91 3.5 92 3.0 93 3.5 94 4.0 95 2.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4729754.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.970929010534896 #Duplication Level Percentage of deduplicated Percentage of total 1 78.74757817037198 10.214292461994424 2 8.909621372553856 2.3113213266828105 3 3.1822504102652895 1.2383023249588987 4 1.5767870555800014 0.8180957185063416 5 0.9748430275664383 0.632230985348959 6 0.6153328539716132 0.47888632600293773 7 0.43700840377314903 0.396788348764408 8 0.326920828188937 0.3392373483603181 9 0.26488546644571204 0.3092229523070778 >10 2.245869651498655 6.713209022533011 >50 0.8770837090567721 8.277672577119427 >100 1.5840864689044258 44.3669507990608 >500 0.2386350200225981 19.715026740915835 >1k 0.018421541913925775 3.3780616033447064 >5k 5.070149150621773E-4 0.487534491417061 >10k+ 1.690049716873924E-4 0.3231669726830177 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14742 0.3116864006034986 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8543 0.1806225017199626 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8320 0.17590766877093397 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5377 0.11368455949294615 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.114274865035264E-5 0.0 0.0 0.016618200439177173 0.0 2 2.114274865035264E-5 0.0 0.0 0.06583851929719813 0.0 3 2.114274865035264E-5 0.0 0.0 0.0941486597400203 0.0 4 2.114274865035264E-5 0.0 0.0 0.12801934307788523 0.0 5 2.114274865035264E-5 0.0 0.0 0.23007539081313744 0.0 6 2.114274865035264E-5 0.0 0.0 0.32449890628561234 0.0 7 2.114274865035264E-5 0.0 0.0 0.392049988223489 0.0 8 2.114274865035264E-5 0.0 0.0 0.5539400146392391 0.0 9 2.114274865035264E-5 0.0 0.0 0.6254236478260814 0.0 10 4.228549730070528E-5 0.0 0.0 0.775283450259781 0.0 11 4.228549730070528E-5 0.0 0.0 0.9094553331949188 0.0 12 4.228549730070528E-5 0.0 0.0 1.0431409329110986 0.0 13 1.057137432517632E-4 0.0 0.0 1.0925303937583224 0.0 14 1.057137432517632E-4 0.0 0.0 1.110565158357073 0.0 15 1.057137432517632E-4 0.0 0.0 1.1409895736649305 0.0 16 1.057137432517632E-4 0.0 0.0 1.2116063541571085 0.0 17 1.057137432517632E-4 0.0 0.0 1.2962619197531204 0.0 18 1.057137432517632E-4 0.0 0.0 1.4400326105755183 0.0 19 1.2685649190211583E-4 0.0 0.0 1.4980483128720858 0.0 20 1.2685649190211583E-4 0.0 0.0 1.5627239809935147 0.0 21 1.2685649190211583E-4 0.0 0.0 1.6469989771138203 0.0 22 1.2685649190211583E-4 0.0 0.0 1.7328596793829023 0.0 23 1.2685649190211583E-4 0.0 0.0 1.8382774241535607 0.0 24 1.6914198920282112E-4 0.0 0.0 1.9200364331844744 0.0 25 2.3257023515387904E-4 0.0 0.0 1.9843738173274974 0.0 26 2.3257023515387904E-4 0.0 0.0 2.0498529098976395 0.0 27 2.3257023515387904E-4 0.0 0.0 2.116241140659747 0.0 28 2.3257023515387904E-4 0.0 0.0 2.183052226394861 0.0 29 2.3257023515387904E-4 0.0 0.0 2.2613226818984664 0.0 30 2.3257023515387904E-4 0.0 0.0 2.369721554228825 0.0 31 2.5371298380423167E-4 0.0 0.0 2.4642084979472507 0.0 32 2.5371298380423167E-4 0.0 0.0 2.5477223551161434 0.0 33 2.5371298380423167E-4 0.0 0.0 2.633435058144673 0.0 34 2.5371298380423167E-4 0.0 0.0 2.726949435425183 0.0 35 2.5371298380423167E-4 0.0 0.0 2.861205889354922 0.0 36 2.748557324545843E-4 0.0 0.0 2.960788235498083 0.0 37 2.748557324545843E-4 2.114274865035264E-5 0.0 3.0688065383527348 0.0 38 2.95998481104937E-4 2.114274865035264E-5 0.0 3.169551735671665 0.0 39 2.95998481104937E-4 2.114274865035264E-5 0.0 3.273278060550295 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATCGA 60 0.0 45.000004 41 CAATACG 70 0.0 45.000004 12 CGACCGT 20 7.035518E-4 45.0 35 TATCGTG 235 0.0 43.085106 1 CTACGTC 65 0.0 41.53846 41 ACGGGTA 685 0.0 41.38686 5 ACGCTAG 120 0.0 41.250004 1 GCTACGA 710 0.0 40.563377 10 ACGACTT 350 0.0 40.500004 17 TCGACTA 50 1.0822987E-9 40.499996 37 GCGCTAA 235 0.0 40.212765 14 CGAACTA 90 0.0 40.0 24 ACGGGAT 675 0.0 39.666668 5 ACGATAT 120 0.0 39.375004 39 TACGATA 120 0.0 39.375004 38 AATCGTC 40 3.461264E-7 39.375 40 TATGTCG 200 0.0 39.374996 1 CGACGGT 300 0.0 39.0 28 CGCGACC 1165 0.0 38.819744 10 ATTGGGC 935 0.0 38.743317 4 >>END_MODULE