##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545220_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3201584 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18402047236618 31.0 31.0 33.0 30.0 34.0 2 31.44444093923508 31.0 31.0 34.0 30.0 34.0 3 31.54732220051075 31.0 31.0 34.0 30.0 34.0 4 35.299450209646224 37.0 35.0 37.0 33.0 37.0 5 35.153189171360175 37.0 35.0 37.0 32.0 37.0 6 35.14860800153924 37.0 35.0 37.0 32.0 37.0 7 35.803042493965485 37.0 35.0 37.0 35.0 37.0 8 35.887326398432776 37.0 35.0 37.0 35.0 37.0 9 37.502377885446705 39.0 37.0 39.0 35.0 39.0 10 36.74697774601572 39.0 37.0 39.0 32.0 39.0 11 36.40352369327183 38.0 35.0 39.0 32.0 39.0 12 35.45459903597719 37.0 35.0 39.0 30.0 39.0 13 35.01814882882973 37.0 34.0 39.0 29.0 39.0 14 35.794038825781236 38.0 34.0 40.0 28.0 41.0 15 36.23955360846381 38.0 35.0 40.0 30.0 41.0 16 36.1821545210121 38.0 35.0 40.0 31.0 41.0 17 36.25961586514675 37.0 35.0 40.0 31.0 41.0 18 36.34406343859789 37.0 35.0 40.0 31.0 41.0 19 36.25675353200166 37.0 35.0 40.0 31.0 41.0 20 36.11066990589658 37.0 34.0 40.0 31.0 41.0 21 35.9768920634286 37.0 34.0 40.0 30.0 41.0 22 35.85404537254059 37.0 34.0 40.0 30.0 41.0 23 35.79595100425289 36.0 34.0 40.0 30.0 41.0 24 35.62322150535485 36.0 34.0 40.0 30.0 41.0 25 35.582272087816534 36.0 34.0 40.0 30.0 41.0 26 35.43256837865257 36.0 34.0 40.0 29.0 41.0 27 35.38948970259722 36.0 34.0 40.0 29.0 41.0 28 35.42364623261486 36.0 34.0 40.0 29.0 41.0 29 35.415679238776804 36.0 34.0 40.0 29.0 41.0 30 35.33074877935422 36.0 34.0 40.0 29.0 41.0 31 35.18635275538608 36.0 34.0 40.0 29.0 41.0 32 35.04502146437513 36.0 34.0 40.0 29.0 41.0 33 34.874892240840786 36.0 34.0 40.0 27.0 41.0 34 34.7330465169741 35.0 34.0 40.0 27.0 41.0 35 34.586700520742234 35.0 33.0 40.0 26.0 41.0 36 34.35444642402011 35.0 33.0 40.0 24.0 41.0 37 34.18110878864962 35.0 33.0 40.0 24.0 41.0 38 34.259086127366956 35.0 33.0 40.0 25.0 41.0 39 34.25038918235474 35.0 33.0 40.0 24.0 41.0 40 34.110912285918474 35.0 33.0 40.0 24.0 41.0 41 34.11255803377328 35.0 33.0 40.0 24.0 41.0 42 34.049150982763535 35.0 33.0 40.0 24.0 41.0 43 33.902169676010374 35.0 33.0 40.0 23.0 41.0 44 33.8657242789819 35.0 33.0 39.0 23.0 41.0 45 33.81986666600033 35.0 33.0 39.0 23.0 41.0 46 33.74187464704971 35.0 33.0 39.0 23.0 41.0 47 33.76075967396139 35.0 33.0 39.0 23.0 41.0 48 33.72401348832328 35.0 33.0 39.0 23.0 41.0 49 33.692287942468475 35.0 33.0 39.0 24.0 41.0 50 33.49258523280976 35.0 32.0 39.0 24.0 41.0 51 33.313622256982796 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 5.0 12 7.0 13 16.0 14 39.0 15 119.0 16 307.0 17 856.0 18 1965.0 19 3731.0 20 6380.0 21 10257.0 22 15470.0 23 21854.0 24 30680.0 25 41612.0 26 54063.0 27 65430.0 28 74270.0 29 86621.0 30 103069.0 31 126614.0 32 157410.0 33 204617.0 34 336765.0 35 484130.0 36 229567.0 37 272271.0 38 364002.0 39 509065.0 40 391.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.53349467013828 24.241406753656943 27.792680123338947 14.43241845286583 2 30.541631892213356 26.5795931014148 29.65731962678474 13.221455379587105 3 29.594631907205933 26.260750928290495 30.487158856366097 13.657458308137471 4 26.641468722982125 28.85952703411811 29.728003388322783 14.771000854576984 5 22.769853922308457 32.923327952663435 29.078106337363007 15.228711787665105 6 21.12354384579633 41.81626969650023 26.646216372895417 10.413970084808021 7 85.86768299691653 5.5272015352400565 6.591268572056832 2.0138468957865854 8 87.37178221780219 4.2664818414884635 6.367504335354 1.994231605355349 9 82.56987791043433 6.193434250046227 8.10842383020405 3.1282640093153886 10 52.86464450097201 22.636982193814063 13.529646574945403 10.968726730268518 11 46.2205583236298 21.501825346453504 18.94908895096927 13.328527378947422 12 41.60471816450857 22.398631427443416 23.432494665140755 12.56415574290726 13 20.489982458682952 41.75886061399608 23.10412595765096 14.647030969670013 14 14.590402750638434 43.40973093318807 27.141533690823046 14.858332625350451 15 13.690691857530524 23.720196002978525 48.1998598193894 14.38925232010155 16 15.464844901773622 18.71236238062159 46.22889794551697 19.593894772087815 17 15.11451831343485 19.527771253229652 29.204606219921136 36.15310421341436 18 19.800105197927024 23.688805291380767 36.76764376633566 19.743445744356546 19 31.083332500412297 23.560618743721857 25.41660627989145 19.939442475974392 20 32.14146497483746 23.07182944442501 25.942970729488902 18.84373485124863 21 21.766444360041778 30.227349961768923 27.584939205093477 20.421266473095816 22 21.526188286798035 25.390744081679568 23.87433845246603 29.20872917905637 23 18.693777829974163 31.61897360806401 25.7560944832308 23.93115407873103 24 17.839763067281694 24.05696680143329 41.2929662317153 16.81030389956971 25 17.124211015547306 26.441630143079177 37.42516204478783 19.008996796585688 26 16.314112014552794 36.616249956271645 26.3541734341501 20.715464595025463 27 16.983436948710388 37.80225663296668 26.940039680358225 18.274266737964705 28 14.969777460157221 30.384615865146753 37.6666050305099 16.979001644186127 29 15.637603136447458 25.898961264174236 36.741156877345716 21.722278722032595 30 18.37031294509218 34.53787250311096 29.32045512471327 17.771359427083596 31 30.675534360491557 28.09581132339492 23.54803122454385 17.68062309156967 32 31.826714526309473 25.761591762077774 25.439251320596306 16.972442391016447 33 29.43461736440462 26.68054313115008 23.98353440047177 19.90130510397353 34 19.17984972438643 27.1854182179821 26.73892048436024 26.89581157327123 35 20.6638339022184 25.400957775900928 31.039822787720077 22.89538553416059 36 31.298194893527704 26.552387818030077 24.141018945621916 18.008398342820303 37 19.595050450027237 36.28794371785966 26.672953138196593 17.44405269391651 38 19.430381960929342 36.31205678189296 23.57101984517664 20.68654141200106 39 20.260002548738374 34.53012633746296 25.249314089525686 19.960557024272983 40 25.617163254189173 24.931658828879705 26.35632861733442 23.0948492995967 41 16.681992413755193 24.8246805331361 27.074566839414487 31.41876021369422 42 18.789261815401375 25.914672237242563 25.09257917330921 30.203486774046844 43 19.511216947610933 25.566563301165925 27.26138061659479 27.660839134628358 44 17.434401221395408 29.9921226492886 31.040915996581692 21.532560132734297 45 16.504923812712708 39.647062204208915 23.110497803587222 20.737516179491152 46 20.462589768064806 35.84697449762368 24.607725425914172 19.082710308397345 47 20.51953033248542 28.36489687604636 26.3908115482836 24.724761243184624 48 20.99629433430452 25.78989025432411 32.48410786660603 20.72970754476534 49 20.59015162494565 26.728269506594238 33.5375239256568 19.14405494280331 50 19.559568013833154 36.07323749743877 25.4006766650508 18.96651782367728 51 17.9004830109096 34.67446114173484 25.04697674651048 22.378079100845085 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 8732.0 1 8526.0 2 8320.0 3 16409.5 4 24499.0 5 18203.5 6 11908.0 7 11937.5 8 11967.0 9 12785.0 10 13603.0 11 13811.0 12 14019.0 13 14016.0 14 14013.0 15 13891.0 16 13769.0 17 13309.5 18 12850.0 19 13078.5 20 13307.0 21 15152.5 22 16998.0 23 16967.0 24 16936.0 25 19270.5 26 27233.0 27 32861.0 28 39384.5 29 45908.0 30 51547.0 31 57186.0 32 69044.0 33 80902.0 34 84626.0 35 88350.0 36 93325.5 37 98301.0 38 122927.5 39 147554.0 40 203587.5 41 259621.0 42 300363.0 43 341105.0 44 340460.0 45 339815.0 46 315306.5 47 290798.0 48 258924.5 49 227051.0 50 212588.5 51 198126.0 52 173211.5 53 148297.0 54 132323.5 55 116350.0 56 107937.0 57 99524.0 58 99749.5 59 99975.0 60 93640.0 61 87305.0 62 77563.0 63 67821.0 64 58891.0 65 49961.0 66 44176.0 67 38391.0 68 33234.0 69 28077.0 70 23953.5 71 19830.0 72 17163.5 73 14497.0 74 12392.5 75 7998.5 76 5709.0 77 4137.5 78 2566.0 79 2136.0 80 1706.0 81 1246.0 82 786.0 83 525.0 84 264.0 85 168.5 86 73.0 87 56.5 88 40.0 89 24.5 90 9.0 91 7.0 92 5.0 93 3.0 94 1.0 95 3.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3201584.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.1912591329443 #Duplication Level Percentage of deduplicated Percentage of total 1 78.9800678133824 12.787867443039879 2 7.989472309438139 2.5871923299519173 3 2.922240140587671 1.4194424209483965 4 1.4770241300976141 0.9565952174408843 5 1.0061300454971016 0.8145256144042304 6 0.6601844923784381 0.641353091499035 7 0.49435897118353617 0.5603005944989864 8 0.3526708574185751 0.4568148192881441 9 0.29444342388010275 0.4290668798430693 >10 3.125682671544187 12.181430375498316 >50 1.2929112628723731 15.211889640322463 >100 1.3644594521547966 45.917986000238145 >500 0.03316255102873022 3.4918468094459096 >1k 0.006592555324988538 1.691339544237929 >5k 3.9954880757506287E-4 0.4176190949464687 >10k+ 1.9977440378753143E-4 0.434730124396293 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13440 0.4197922028595845 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7225 0.22566954357592992 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5686 0.1775995882038391 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4146 0.12949839829284504 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3981 0.12434469937380997 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3206 0.10013793172379672 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04176057851363575 0.0 2 0.0 0.0 0.0 0.12428223029600348 0.0 3 0.0 0.0 0.0 0.17422625800228886 0.0 4 0.0 0.0 0.0 0.23394669638528928 0.0 5 3.123453890324289E-5 0.0 0.0 0.4133891223844197 0.0 6 3.123453890324289E-5 0.0 0.0 0.5792757584995427 0.0 7 3.123453890324289E-5 0.0 0.0 0.6983418207987047 0.0 8 6.246907780648578E-5 0.0 0.0 0.9787967456109226 0.0 9 6.246907780648578E-5 0.0 0.0 1.094989230330986 0.0 10 6.246907780648578E-5 0.0 0.0 1.2930786760553525 0.0 11 9.370361670972869E-5 0.0 0.0 1.499007991044433 0.0 12 9.370361670972869E-5 0.0 0.0 1.6872273224753747 0.0 13 1.2493815561297157E-4 0.0 0.0 1.7655010769669013 0.0 14 1.2493815561297157E-4 0.0 0.0 1.7932998165907876 0.0 15 1.2493815561297157E-4 0.0 0.0 1.8407138466459103 0.0 16 1.2493815561297157E-4 0.0 0.0 1.9436628868709989 0.0 17 1.2493815561297157E-4 0.0 0.0 2.0601364824411914 0.0 18 1.2493815561297157E-4 0.0 0.0 2.2532908710188457 0.0 19 1.5617269451621447E-4 0.0 0.0 2.330908700193404 0.0 20 1.5617269451621447E-4 0.0 0.0 2.417428372955387 0.0 21 1.5617269451621447E-4 0.0 0.0 2.5288107386843515 0.0 22 1.5617269451621447E-4 0.0 0.0 2.6497508733177075 0.0 23 1.5617269451621447E-4 0.0 0.0 2.789900249376559 0.0 24 1.8740723341945738E-4 0.0 0.0 2.899408542771328 0.0 25 1.8740723341945738E-4 0.0 0.0 2.986709079005892 0.0 26 2.1864177232270026E-4 0.0 0.0 3.0752589967965855 0.0 27 2.1864177232270026E-4 0.0 0.0 3.15899879559618 0.0 28 2.4987631122594313E-4 0.0 0.0 3.254170435634361 0.0 29 2.4987631122594313E-4 0.0 0.0 3.359087251810354 0.0 30 2.4987631122594313E-4 0.0 0.0 3.5005172439642376 0.0 31 2.4987631122594313E-4 0.0 0.0 3.6229254019260466 0.0 32 2.4987631122594313E-4 0.0 0.0 3.7433033148591446 0.0 33 2.4987631122594313E-4 0.0 0.0 3.861994562691468 0.0 34 2.8111085012918607E-4 0.0 0.0 3.993117157007281 0.0 35 3.1234538903242894E-4 0.0 0.0 4.159784656594986 0.0 36 3.1234538903242894E-4 0.0 0.0 4.286409477308732 0.0 37 3.435799279356718E-4 0.0 0.0 4.421592561681967 0.0 38 3.435799279356718E-4 0.0 0.0 4.5472178771508105 0.0 39 3.435799279356718E-4 0.0 0.0 4.683962688469208 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAC 20 7.035176E-4 45.000004 31 CGTTACA 20 7.035176E-4 45.000004 32 GTCGTAC 20 7.035176E-4 45.000004 41 CTATTCG 20 7.035176E-4 45.000004 9 ACCGTAT 25 3.8923732E-5 45.0 4 ATTACGC 30 2.166722E-6 44.999996 31 ACTACGG 130 0.0 41.53846 2 CGTTAGG 555 0.0 41.351353 2 CGTAAGG 350 0.0 41.14286 2 TACGCGC 285 0.0 41.05263 34 TATTACG 170 0.0 41.029415 1 ACGACGG 270 0.0 40.833332 27 TATACGG 310 0.0 40.64516 2 AGCGGGA 1210 0.0 40.165287 4 GTATGCG 185 0.0 40.135136 1 CGAACGC 45 1.9301297E-8 40.000004 17 CGTATTA 45 1.9301297E-8 40.000004 35 GTATACG 90 0.0 40.000004 1 GCGTATG 180 0.0 40.000004 1 CAAATCG 85 0.0 39.705883 1 >>END_MODULE