##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545219_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1400074 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16308066573624 31.0 31.0 33.0 30.0 34.0 2 31.427855956185173 31.0 31.0 34.0 30.0 34.0 3 31.5161962867677 31.0 31.0 34.0 30.0 34.0 4 35.2861734451179 37.0 35.0 37.0 33.0 37.0 5 35.138945512880035 37.0 35.0 37.0 32.0 37.0 6 35.14306815211196 37.0 35.0 37.0 32.0 37.0 7 35.80262686115162 37.0 35.0 37.0 35.0 37.0 8 35.88803520385351 37.0 35.0 37.0 35.0 37.0 9 37.496108777107494 39.0 37.0 39.0 35.0 39.0 10 36.712231639184786 39.0 37.0 39.0 32.0 39.0 11 36.393202073604684 38.0 35.0 39.0 32.0 39.0 12 35.626851866401346 37.0 35.0 39.0 31.0 39.0 13 35.293583053467174 37.0 35.0 39.0 30.0 39.0 14 36.11897371138954 38.0 35.0 40.0 30.0 41.0 15 36.48270519986801 38.0 35.0 40.0 31.0 41.0 16 36.36769842165486 38.0 35.0 40.0 31.0 41.0 17 36.43257427821672 38.0 35.0 40.0 31.0 41.0 18 36.4757248545434 38.0 35.0 40.0 31.0 41.0 19 36.42082918474309 38.0 35.0 40.0 31.0 41.0 20 36.30967077454478 38.0 35.0 40.0 31.0 41.0 21 36.18308317988906 37.0 34.0 40.0 30.0 41.0 22 36.07022985927887 37.0 34.0 40.0 30.0 41.0 23 35.98578503707661 37.0 34.0 40.0 30.0 41.0 24 35.79500797814973 37.0 34.0 40.0 30.0 41.0 25 35.73360408092715 37.0 34.0 40.0 30.0 41.0 26 35.58876459387147 37.0 34.0 40.0 29.0 41.0 27 35.55057232689129 37.0 34.0 40.0 29.0 41.0 28 35.57587170392422 37.0 34.0 40.0 29.0 41.0 29 35.55287077683037 36.0 34.0 40.0 29.0 41.0 30 35.45443812255638 36.0 34.0 40.0 29.0 41.0 31 35.35922815508323 36.0 34.0 40.0 29.0 41.0 32 35.22583377735748 36.0 34.0 40.0 29.0 41.0 33 35.04751963110521 36.0 34.0 40.0 27.0 41.0 34 34.882929759427 36.0 34.0 40.0 27.0 41.0 35 34.7183598866917 36.0 33.0 40.0 26.0 41.0 36 34.51568345673157 36.0 33.0 40.0 24.0 41.0 37 34.330951792548106 36.0 33.0 40.0 24.0 41.0 38 34.39420059225441 35.0 33.0 40.0 24.0 41.0 39 34.3803263256085 36.0 33.0 40.0 24.0 41.0 40 34.2262437556872 35.0 33.0 40.0 24.0 41.0 41 34.205991968995924 35.0 33.0 40.0 24.0 41.0 42 34.12719113418291 35.0 33.0 40.0 24.0 41.0 43 33.98570147006515 35.0 33.0 40.0 23.0 41.0 44 33.93252999484313 35.0 33.0 40.0 23.0 41.0 45 33.873706675504295 35.0 33.0 40.0 23.0 41.0 46 33.78206437659723 35.0 33.0 39.0 23.0 41.0 47 33.795753653021194 35.0 33.0 39.0 23.0 41.0 48 33.739282352218524 35.0 33.0 39.0 23.0 41.0 49 33.71054458550048 35.0 33.0 39.0 24.0 41.0 50 33.499650018499025 35.0 32.0 39.0 23.0 41.0 51 33.331551046587535 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 4.0 14 16.0 15 47.0 16 130.0 17 421.0 18 829.0 19 1626.0 20 2894.0 21 4516.0 22 6771.0 23 9678.0 24 13350.0 25 18452.0 26 23538.0 27 28423.0 28 32139.0 29 37537.0 30 44670.0 31 53841.0 32 67006.0 33 86283.0 34 137251.0 35 189528.0 36 107095.0 37 126844.0 38 169462.0 39 237553.0 40 166.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.69616605979398 24.238075987412095 26.77622754225848 14.289530410535441 2 32.25800921951269 25.66428631629471 28.91768577946594 13.160018684726666 3 29.724000302841137 26.162759968401673 30.538100128993186 13.575139599764013 4 27.17999191471308 28.392356404018642 30.228116513841414 14.199535167426863 5 23.239843036868052 32.86826267754419 29.318664584871946 14.573229700715821 6 21.159952973914237 42.12027364267888 26.849223683890994 9.870549699515884 7 86.33136534211762 5.129228883616152 6.651434138481252 1.8879716357849659 8 87.53123049210257 4.119639390489359 6.558010505159014 1.7911196122490667 9 82.93633050824457 5.918615730311398 8.193852610647722 2.951201150796315 10 49.202685000935666 25.049675945700013 14.04997164435594 11.69766740900838 11 41.48887844499648 22.94321585859033 20.9545352602791 14.61337043613409 12 37.839428487351384 22.073118992281838 25.905059304008216 14.182393216358562 13 21.675997125866203 38.00706248384014 24.633555083517013 15.683385306776643 14 15.72838292833093 40.346367406294235 27.645395886217443 16.27985377915739 15 15.119629391017902 24.38921085599761 45.093045081902815 15.398114671081672 16 17.15423613323296 20.395064832287435 42.70995675942843 19.740742275051176 17 16.924176864937138 20.158363057952652 29.9566308637972 32.96082921331301 18 20.075867418436456 24.38306832353147 35.85646187272958 19.68460238530249 19 29.692787666937605 24.605270864254315 26.204043500557827 19.49789796825025 20 31.296845738153838 22.62537551586559 26.489742685029505 19.588036060951065 21 22.15304333913779 28.963897622554235 28.359500997804403 20.523558040503573 22 22.18704154208992 25.16588408898387 24.79061821018032 27.856456158745896 23 20.17900482403073 30.396964731864173 25.88134627169707 23.54268417240803 24 18.808362986527854 24.3333566654334 39.3513485715755 17.506931776463244 25 18.682726770156435 26.346964517589782 35.20913894551288 19.761169766740903 26 17.830271828489067 34.15690884910369 26.982859477427624 21.029959844979622 27 17.79713072309035 35.15249908219137 27.60025541507092 19.45011477964736 28 16.378277148207882 29.767283729288597 35.49105261579031 18.363386506713216 29 16.834967294585855 26.417675065746526 34.62616975959842 22.121187880069197 30 18.698797349282966 32.67013029311308 30.051911541818505 18.57916081578545 31 28.1542261337615 27.917524359426714 25.572076904506474 18.356172602305307 32 29.69700172990856 25.71814061256762 26.693446203557812 17.891411453966004 33 28.331002504153354 27.59782697200291 24.358855317647496 19.712315206196244 34 19.942303049695944 27.1904199349463 27.192134130053127 25.675142885304638 35 20.9469642318906 26.11019131845888 30.989861964439026 21.952982485211496 36 29.450657608097856 27.90873910950421 24.510061611029133 18.1305416713688 37 20.184718807720163 35.40034312472055 27.18692011993652 17.228017947622767 38 19.91437595441384 34.45196468186681 25.201810761431183 20.431848602288163 39 20.69833451660412 33.70350424334714 25.74256789283995 19.855593347208792 40 24.99996428760194 25.726997287286242 27.699464456878708 21.57357396823311 41 17.685065217981336 26.45053047196077 27.72646302981128 28.137941280246615 42 19.613034739592337 27.010215174340786 25.826849152259097 27.549900933807788 43 20.293141648227163 25.789708258277777 27.628468209537495 26.28868188395756 44 18.211608814962638 29.847279500940665 30.17047670337425 21.77063498072245 45 17.744133524370856 37.80664450593326 23.479401803047555 20.969820166648333 46 20.423920449919073 34.5866004225491 25.39244354226991 19.59703558526192 47 20.69383475444869 28.712482340219157 26.92114845358174 23.67253445175041 48 20.85261207621883 26.699803010412303 32.08537548729567 20.362209426073193 49 21.24809117232375 26.972788581174996 32.12430200117994 19.65481824532132 50 19.208698968768793 35.044076241684365 26.537597298428512 19.20962749111833 51 18.636014953495312 33.51422853363465 26.58530906223528 21.26444745063475 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4317.0 1 4160.0 2 4003.0 3 8179.5 4 12356.0 5 9093.5 6 5831.0 7 5861.5 8 5892.0 9 6124.5 10 6357.0 11 6714.0 12 7071.0 13 7079.5 14 7088.0 15 6943.5 16 6799.0 17 6226.0 18 5653.0 19 5291.0 20 4929.0 21 5320.5 22 5712.0 23 6277.5 24 6843.0 25 8522.0 26 11872.5 27 13544.0 28 17292.5 29 21041.0 30 25351.0 31 29661.0 32 33860.5 33 38060.0 34 41365.0 35 44670.0 36 47582.5 37 50495.0 38 57496.0 39 64497.0 40 80898.0 41 97299.0 42 116014.0 43 134729.0 44 135684.0 45 136639.0 46 128867.5 47 121096.0 48 110449.5 49 99803.0 50 92138.5 51 84474.0 52 74112.0 53 63750.0 54 58225.0 55 52700.0 56 50316.0 57 47932.0 58 47625.5 59 47319.0 60 44713.0 61 42107.0 62 37539.0 63 32971.0 64 29438.0 65 25905.0 66 22158.0 67 18411.0 68 15750.5 69 13090.0 70 11468.5 71 9847.0 72 8776.0 73 7705.0 74 6087.0 75 3405.0 76 2341.0 77 1792.5 78 1244.0 79 956.5 80 669.0 81 495.0 82 321.0 83 228.0 84 135.0 85 105.5 86 76.0 87 42.5 88 9.0 89 8.0 90 7.0 91 4.0 92 1.0 93 2.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1400074.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.76508163332681 #Duplication Level Percentage of deduplicated Percentage of total 1 76.72866825770822 15.932770599877626 2 6.794105776824244 2.8216032216242537 3 2.641353639159161 1.6454377181887445 4 1.537768625839061 1.2772756419486755 5 1.0725279215665329 1.1135564922675694 6 0.7857918670668481 0.9790219359868432 7 0.6558218717318913 0.9532736292403733 8 0.5419187542062023 0.9002389735778044 9 0.47703864071722923 0.8915171685070069 >10 6.768712531272501 33.08822531341657 >50 1.3211747338269135 19.503079527806776 >100 0.6680295335712176 19.062716218644347 >500 0.004607100231525263 0.5742952338260163 >1k 0.0021263539530116597 0.7594473107489094 >5k 3.543923255019433E-4 0.4975410143385055 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6761 0.4829030465532536 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3673 0.26234327614111824 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1576 0.11256547868184111 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1575 0.11249405388572319 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.142479611791949E-5 0.0 0.0 0.025141528233507657 0.0 2 7.142479611791949E-5 0.0 0.0 0.08235278992396117 0.0 3 7.142479611791949E-5 0.0 0.0 0.1235648972840007 0.0 4 7.142479611791949E-5 0.0 0.0 0.16334850872168186 0.0 5 7.142479611791949E-5 0.0 0.0 0.28662770682121086 0.0 6 7.142479611791949E-5 0.0 0.0 0.41776363249371107 0.0 7 7.142479611791949E-5 0.0 0.0 0.5084016987673509 0.0 8 7.142479611791949E-5 0.0 0.0 0.7203904936453359 0.0 9 7.142479611791949E-5 0.0 0.0 0.8168853932006451 0.0 10 7.142479611791949E-5 0.0 0.0 0.9737342454755963 0.0 11 7.142479611791949E-5 0.0 0.0 1.130083124177722 0.0 12 7.142479611791949E-5 0.0 0.0 1.2669330335396558 0.0 13 7.142479611791949E-5 0.0 0.0 1.327929809424359 0.0 14 7.142479611791949E-5 0.0 0.0 1.3531427624539847 0.0 15 7.142479611791949E-5 0.0 0.0 1.3910693291925997 0.0 16 7.142479611791949E-5 0.0 0.0 1.4717793488058488 0.0 17 7.142479611791949E-5 0.0 0.0 1.568274248361158 0.0 18 7.142479611791949E-5 0.0 0.0 1.714695080402893 0.0 19 7.142479611791949E-5 0.0 0.0 1.7771917770060726 0.0 20 1.4284959223583897E-4 0.0 0.0 1.8496879450657608 0.0 21 1.4284959223583897E-4 0.0 0.0 1.9413973832811695 0.0 22 1.4284959223583897E-4 0.0 0.0 2.0362495125257665 0.0 23 1.4284959223583897E-4 0.0 0.0 2.1544575501009233 0.0 24 1.4284959223583897E-4 0.0 0.0 2.248881130568813 0.0 25 1.4284959223583897E-4 0.0 0.0 2.318877430764374 0.0 26 1.4284959223583897E-4 0.0 0.0 2.3926592451541846 0.0 27 1.4284959223583897E-4 0.0 0.0 2.467798130670236 0.0 28 1.4284959223583897E-4 0.0 0.0 2.546722530380537 0.0 29 1.4284959223583897E-4 0.0 0.0 2.6394319157415964 0.0 30 1.4284959223583897E-4 0.0 0.0 2.7571399797439278 0.0 31 1.4284959223583897E-4 0.0 0.0 2.8596345621731425 0.0 32 1.4284959223583897E-4 0.0 0.0 2.9559866121362157 0.0 33 1.4284959223583897E-4 0.0 0.0 3.053267184448822 0.0 34 1.4284959223583897E-4 0.0 0.0 3.1607615026062907 0.0 35 1.4284959223583897E-4 0.0 0.0 3.3024682981042432 0.0 36 1.4284959223583897E-4 0.0 0.0 3.416105148727853 0.0 37 1.4284959223583897E-4 0.0 0.0 3.5336703631379485 0.0 38 1.4284959223583897E-4 0.0 0.0 3.6380934150623467 0.0 39 1.4284959223583897E-4 0.0 0.0 3.7604440908123427 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 50 2.1827873E-11 45.0 21 TATTACG 35 1.2121745E-7 45.0 1 GCGATAC 85 0.0 45.0 9 TCGAACG 25 3.8912433E-5 45.0 1 CGGTCTA 110 0.0 42.954544 31 TCGATAG 85 0.0 42.35294 1 ATCGCCA 55 6.184564E-11 40.909092 24 TCGATTG 50 1.0822987E-9 40.5 1 ACGTATG 90 0.0 40.0 1 ACCGGGT 40 3.4589357E-7 39.375 4 GACCGAT 675 0.0 39.333332 9 GGGCGAT 2200 0.0 39.068184 7 AGGGACC 760 0.0 38.782894 6 TAACGGG 285 0.0 38.68421 3 CGTTGAT 350 0.0 38.57143 25 TAGGGTA 525 0.0 38.57143 5 TCGTTAG 70 0.0 38.571426 1 CGACCCG 455 0.0 38.571426 32 TAGCCGT 70 0.0 38.571426 44 TTACGGG 315 0.0 38.571426 3 >>END_MODULE