##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545218_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 787816 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.313050255389584 31.0 31.0 34.0 30.0 34.0 2 31.552622693623892 31.0 31.0 34.0 30.0 34.0 3 31.637582887374716 31.0 31.0 34.0 30.0 34.0 4 35.37092798318389 37.0 35.0 37.0 33.0 37.0 5 35.22271063293967 37.0 35.0 37.0 32.0 37.0 6 35.21864369345126 37.0 35.0 37.0 32.0 37.0 7 35.87376113204098 37.0 35.0 37.0 35.0 37.0 8 36.000038079957754 37.0 35.0 37.0 35.0 37.0 9 37.709952577759275 39.0 38.0 39.0 35.0 39.0 10 36.93516125592778 39.0 37.0 39.0 32.0 39.0 11 36.47720533728688 39.0 35.0 39.0 32.0 39.0 12 35.02468342861785 35.0 35.0 39.0 30.0 39.0 13 34.40982031337266 35.0 33.0 39.0 26.0 39.0 14 35.02080815825015 35.0 33.0 40.0 25.0 41.0 15 35.625382068909495 35.0 33.0 40.0 30.0 41.0 16 35.69784949785229 35.0 34.0 40.0 31.0 41.0 17 35.81347548158453 35.0 34.0 40.0 31.0 41.0 18 35.923279039775785 36.0 35.0 40.0 31.0 41.0 19 35.773557531200176 36.0 35.0 40.0 31.0 41.0 20 35.58377590706459 35.0 34.0 40.0 30.0 41.0 21 35.465952709769795 35.0 34.0 40.0 30.0 41.0 22 35.32238492236766 35.0 34.0 40.0 30.0 41.0 23 35.3411139149243 35.0 34.0 40.0 30.0 41.0 24 35.157364156097366 35.0 34.0 40.0 30.0 41.0 25 35.15363866689684 35.0 34.0 39.0 30.0 41.0 26 35.01571052123846 35.0 34.0 39.0 29.0 41.0 27 34.9522388476497 35.0 34.0 39.0 29.0 41.0 28 35.09809524051301 35.0 34.0 39.0 29.0 41.0 29 35.18937670725144 36.0 34.0 39.0 30.0 41.0 30 35.12763894107253 36.0 34.0 39.0 30.0 41.0 31 34.89979259116342 35.0 34.0 39.0 29.0 41.0 32 34.687526021304464 35.0 34.0 39.0 29.0 41.0 33 34.49784340505905 35.0 33.0 39.0 27.0 41.0 34 34.385498644353504 35.0 34.0 39.0 27.0 41.0 35 34.24466118992252 35.0 33.0 39.0 27.0 41.0 36 33.93299577566335 35.0 33.0 39.0 24.0 41.0 37 33.70689094915564 35.0 33.0 39.0 23.0 41.0 38 33.87695984849254 35.0 33.0 39.0 25.0 41.0 39 33.91514516079897 35.0 33.0 39.0 25.0 41.0 40 33.71772215847355 35.0 33.0 39.0 23.0 41.0 41 33.856816820171204 35.0 33.0 39.0 24.0 41.0 42 33.828741736649164 35.0 33.0 39.0 24.0 41.0 43 33.69146095027265 35.0 33.0 39.0 24.0 41.0 44 33.68373198817998 35.0 33.0 38.0 24.0 41.0 45 33.606719081612965 35.0 33.0 38.0 24.0 41.0 46 33.5770522558567 35.0 33.0 38.0 23.0 41.0 47 33.612546584481656 35.0 33.0 38.0 24.0 41.0 48 33.66295810189181 35.0 33.0 38.0 24.0 41.0 49 33.70058617748307 35.0 33.0 38.0 24.0 40.0 50 33.46479127105822 35.0 33.0 38.0 24.0 40.0 51 33.27351945124242 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 4.0 15 8.0 16 62.0 17 177.0 18 417.0 19 832.0 20 1518.0 21 2465.0 22 3667.0 23 5517.0 24 7534.0 25 10558.0 26 13606.0 27 16302.0 28 18230.0 29 20877.0 30 25759.0 31 31939.0 32 40644.0 33 54617.0 34 98774.0 35 156201.0 36 46117.0 37 51484.0 38 70601.0 39 109797.0 40 108.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.368004711760104 24.43045076515328 30.84159245306011 14.359952070026505 2 28.932263371142504 26.659905358611656 31.14547051595804 13.262360754287803 3 27.108994993754887 26.04351777572428 33.38076403627243 13.466723194248404 4 24.881063598606783 28.913350325456705 31.575900971800525 14.629685104135993 5 21.660641571128284 33.06178092346436 30.915467571107975 14.36210993429938 6 19.677310437970288 39.691755435279305 28.870954639154323 11.759979487596087 7 87.14687185840349 5.103349005351503 6.164764361221402 1.5850147750236097 8 90.12028189323395 3.3252688445017617 5.261761629619099 1.2926876326451862 9 87.06817327903977 4.166582044538319 6.588086558282645 2.177158118139261 10 63.392848076200536 18.54925515602628 10.671400428526457 7.386496339246727 11 58.499573504473126 15.737811874854026 16.645384201387124 9.117230419285722 12 52.155579475410505 19.971795444621588 19.01928876793566 8.853336312032251 13 18.879027590198728 53.67446205713009 17.62416604892513 9.822344303746053 14 11.043187749423723 53.2124252363496 24.463707261594077 11.280679752632594 15 8.977857773896442 22.262685703260658 57.7233770322004 11.036079490642486 16 10.254044091513755 14.689978370583995 55.65081186469937 19.40516567320288 17 10.499405952658996 16.107822131055983 29.39671192258091 43.996059993704115 18 18.327756735075194 21.088680605623647 41.31865816383521 19.264904495465945 19 32.5413548341237 22.211404693481725 25.190526721975694 20.05671375041888 20 35.85723062237883 21.023690811052326 25.014978116717607 18.104100449851234 21 18.97232348670248 33.530418270256 27.325543020197607 20.171715222843915 22 20.008859936838043 25.761218355555105 20.74126445769063 33.48865724991622 23 15.434568477918702 34.62648638768444 23.25999979690689 26.678945337489974 24 14.689597571006427 21.447520740883657 49.94173766463235 13.921144023477563 25 11.213785960173443 25.86403424149801 44.12553185007667 18.796647948251877 26 12.200691532032861 41.131304771672575 27.62980188267311 19.038201813621455 27 12.215923515135515 45.042497232856405 26.38179473379571 16.359784518212376 28 9.72244788123115 31.8461417386801 43.592920174253884 14.838490205834864 29 10.195781756146104 23.510058186175453 42.80580744742427 23.48835261025417 30 14.715238075895895 38.16804939224387 31.577170303725744 15.539542228134486 31 33.374544309838846 29.434284147567453 22.75734435451933 14.433827188074371 32 36.532515206596464 23.472612894381427 25.427130192836906 14.567741706185199 33 34.56860485189435 27.27375427764859 20.78822973892381 17.36941113153325 34 17.80859997765976 25.762487687480323 25.714506940706965 30.714405394152948 35 18.374087350345768 24.586070859185394 34.49358733511379 22.546254455355058 36 35.95243051677041 24.925109416411953 24.18432730485291 14.938132761964724 37 18.103465783888623 40.64705464220072 27.417696517968665 13.831783055941996 38 16.40687673263808 40.91704154269525 23.070234674086336 19.605847050580337 39 18.569437533637295 39.75915696050855 25.054327406399462 16.617078099454694 40 26.81438305391107 24.154624937802733 24.53542451536907 24.49556749291713 41 13.902357910984293 22.96005666297714 26.424825086060704 36.71276033997786 42 17.374488459234136 22.81878001970003 23.743869126801183 36.06286239426465 43 17.837794611939845 23.09143251723753 27.42188531332189 31.64888755750074 44 14.416564273891366 30.492018440854206 32.903368299196764 22.188048986057655 45 12.347299369395898 48.35900768707414 20.595545152675243 18.698147790854716 46 18.5407506321273 40.77360703514527 23.824090904475156 16.861551428252284 47 17.934263838256648 29.05310377042355 26.115615829076837 26.89701656224296 48 19.781014856260853 22.752267026818444 37.53465276155853 19.932065355362166 49 19.806528427957797 24.37561562598373 37.55699300344243 18.260862942616043 50 17.241335540278442 40.91577221077003 25.237745869593915 16.605146379357617 51 15.034221188703961 39.18630746265626 24.176457446916537 21.603013901723244 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3175.0 1 2691.5 2 2208.0 3 3846.0 4 5484.0 5 3927.0 6 2370.0 7 2510.5 8 2651.0 9 2968.5 10 3286.0 11 3575.5 12 3865.0 13 3776.5 14 3688.0 15 3426.0 16 3164.0 17 2886.5 18 2609.0 19 2492.0 20 2375.0 21 2568.0 22 2761.0 23 2653.5 24 2546.0 25 3206.0 26 4679.0 27 5492.0 28 6919.5 29 8347.0 30 9483.5 31 10620.0 32 13652.0 33 16684.0 34 20236.5 35 23789.0 36 25595.0 37 27401.0 38 33420.5 39 39440.0 40 57897.0 41 76354.0 42 93062.5 43 109771.0 44 108650.0 45 107529.0 46 97779.5 47 88030.0 48 74622.0 49 61214.0 50 52809.5 51 44405.0 52 39152.5 53 33900.0 54 28637.0 55 23374.0 56 19734.5 57 16095.0 58 14652.5 59 13210.0 60 12750.5 61 12291.0 62 10653.5 63 9016.0 64 7891.0 65 6766.0 66 5292.5 67 3819.0 68 3194.0 69 2569.0 70 2052.5 71 1536.0 72 1193.0 73 850.0 74 711.0 75 449.0 76 326.0 77 257.5 78 189.0 79 163.5 80 138.0 81 83.5 82 29.0 83 18.0 84 7.0 85 5.0 86 3.0 87 2.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 787816.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.406532375619317 #Duplication Level Percentage of deduplicated Percentage of total 1 79.77377835847433 16.27906190797686 2 7.429515194753411 3.032212847137823 3 2.372463700508043 1.4524127194319698 4 1.1444838995688196 0.9341979099970467 5 0.7168410441767685 0.7314119988082991 6 0.5244720839701411 0.6421593936987131 7 0.3874566960053216 0.5534653327828161 8 0.3709537432160443 0.6055903656636307 9 0.30751237301083034 0.564773507617413 >10 4.654069586002647 23.488533037855817 >50 1.2349518638687391 18.07138011949867 >100 1.0778220661664828 31.958504433398765 >500 0.0031552168213304526 0.44014976590453103 >1k 0.0025241734570643623 1.2461466602276614 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3214 0.40796328076606725 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2808 0.35642840460208985 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1851 0.23495333935842888 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1804 0.22898747930988964 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 986 0.1251561278268022 No Hit GTGTATGGGAAGATAATTTTTTGTCTAATTGTTTTATGTTTATGTCTTTCT 808 0.1025620195578663 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05686607024990607 0.0 2 0.0 0.0 0.0 0.1693288788244971 0.0 3 0.0 0.0 0.0 0.23571493851356154 0.0 4 0.0 0.0 0.0 0.31415965149222663 0.0 5 0.0 0.0 0.0 0.5260111498116311 0.0 6 0.0 0.0 0.0 0.7231383977984707 0.0 7 0.0 0.0 0.0 0.8746966296698722 0.0 8 0.0 0.0 0.0 1.2614620672847467 0.0 9 0.0 0.0 0.0 1.4257136184083594 0.0 10 0.0 0.0 0.0 1.6937965210150594 0.0 11 0.0 0.0 0.0 1.9392853153528236 0.0 12 0.0 0.0 0.0 2.1597682707637316 0.0 13 1.2693319252211175E-4 0.0 0.0 2.2501447038394753 0.0 14 1.2693319252211175E-4 0.0 0.0 2.2811164028148703 0.0 15 1.2693319252211175E-4 0.0 0.0 2.319196360571504 0.0 16 1.2693319252211175E-4 0.0 0.0 2.4291205052956526 0.0 17 1.2693319252211175E-4 0.0 0.0 2.560115559978472 0.0 18 1.2693319252211175E-4 0.0 0.0 2.778948383886593 0.0 19 1.2693319252211175E-4 0.0 0.0 2.8599317607157 0.0 20 1.2693319252211175E-4 0.0 0.0 2.9532276572194522 0.0 21 1.2693319252211175E-4 0.0 0.0 3.08054164931913 0.0 22 1.2693319252211175E-4 0.0 0.0 3.201762848177747 0.0 23 1.2693319252211175E-4 0.0 0.0 3.358271474557511 0.0 24 1.2693319252211175E-4 0.0 0.0 3.473146013790022 0.0 25 1.2693319252211175E-4 0.0 0.0 3.5621261817480225 0.0 26 1.2693319252211175E-4 0.0 0.0 3.653645013556465 0.0 27 1.2693319252211175E-4 0.0 0.0 3.740213450856545 0.0 28 1.2693319252211175E-4 0.0 0.0 3.8291936188145455 0.0 29 1.2693319252211175E-4 0.0 0.0 3.922997248088386 0.0 30 1.2693319252211175E-4 0.0 0.0 4.071889882916823 0.0 31 1.2693319252211175E-4 0.0 0.0 4.206692933375306 0.0 32 1.2693319252211175E-4 0.0 0.0 4.30608162312012 0.0 33 1.2693319252211175E-4 0.0 0.0 4.411182306528428 0.0 34 1.2693319252211175E-4 0.0 0.0 4.526437645338506 0.0 35 1.2693319252211175E-4 0.0 0.0 4.717091300506717 0.0 36 1.2693319252211175E-4 0.0 0.0 4.851513551387634 0.0 37 1.2693319252211175E-4 0.0 0.0 4.971084618743463 0.0 38 1.2693319252211175E-4 0.0 0.0 5.090782619291814 0.0 39 1.2693319252211175E-4 0.0 0.0 5.205657158524326 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGCCA 30 2.1646283E-6 45.000004 9 TCACATG 30 2.1646283E-6 45.000004 23 GCGCGAC 30 2.1646283E-6 45.000004 9 CGTTGAA 30 2.1646283E-6 45.000004 17 TCTAGCG 30 2.1646283E-6 45.000004 1 ACGCTAG 30 2.1646283E-6 45.000004 1 TCGTAAG 30 2.1646283E-6 45.000004 1 ATCGAAG 30 2.1646283E-6 45.000004 1 GCATAGC 30 2.1646283E-6 45.000004 9 GTTGAGC 25 3.8896847E-5 45.0 13 CGGAATA 20 7.0319336E-4 45.0 45 TAATACG 25 3.8896847E-5 45.0 1 CGGAAAG 20 7.0319336E-4 45.0 15 CATATAG 20 7.0319336E-4 45.0 1 TCCGATA 25 3.8896847E-5 45.0 14 CCTAGGT 20 7.0319336E-4 45.0 37 GGCGTAA 20 7.0319336E-4 45.0 22 TTCACGA 25 3.8896847E-5 45.0 39 ACCTGTT 35 1.2112832E-7 45.0 43 CGACCCG 25 3.8896847E-5 45.0 32 >>END_MODULE