##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545217_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2523290 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.193443480535333 31.0 31.0 33.0 30.0 34.0 2 31.473803248932942 31.0 31.0 34.0 30.0 34.0 3 31.532574931934104 31.0 31.0 34.0 30.0 34.0 4 35.31773200860781 37.0 35.0 37.0 33.0 37.0 5 35.1804275370647 37.0 35.0 37.0 32.0 37.0 6 35.17721823492345 37.0 35.0 37.0 32.0 37.0 7 35.85877009776918 37.0 35.0 37.0 35.0 37.0 8 35.958836677512295 37.0 35.0 37.0 35.0 37.0 9 37.60597196517245 39.0 37.0 39.0 35.0 39.0 10 36.77741797415279 39.0 37.0 39.0 32.0 39.0 11 36.41572946431048 39.0 35.0 39.0 32.0 39.0 12 36.0809534377737 38.0 35.0 39.0 31.0 39.0 13 35.91381648561996 38.0 35.0 39.0 31.0 39.0 14 36.806195879189474 39.0 35.0 41.0 31.0 41.0 15 37.086948388809844 39.0 35.0 41.0 32.0 41.0 16 36.87012234027797 39.0 35.0 41.0 31.0 41.0 17 36.90690725203999 38.0 35.0 41.0 31.0 41.0 18 36.88555932928835 38.0 35.0 40.0 31.0 41.0 19 36.80920940518133 38.0 35.0 40.0 31.0 41.0 20 36.67236583983609 38.0 35.0 40.0 31.0 41.0 21 36.59985534758193 38.0 35.0 40.0 31.0 41.0 22 36.50701385889057 38.0 35.0 40.0 31.0 41.0 23 36.3669443464683 38.0 35.0 40.0 30.0 41.0 24 36.200749022110024 38.0 35.0 40.0 30.0 41.0 25 36.205274463101745 38.0 35.0 40.0 30.0 41.0 26 36.07312912903392 38.0 35.0 40.0 30.0 41.0 27 36.03244454660384 38.0 34.0 40.0 30.0 41.0 28 36.018702170578884 38.0 35.0 40.0 30.0 41.0 29 35.99798675538682 38.0 35.0 40.0 30.0 41.0 30 35.875185174910534 38.0 35.0 40.0 30.0 41.0 31 35.74761521664176 38.0 34.0 40.0 29.0 41.0 32 35.52532566609466 38.0 34.0 40.0 28.0 41.0 33 35.27305264159094 38.0 34.0 40.0 27.0 41.0 34 35.02922533676272 38.0 34.0 40.0 25.0 41.0 35 34.806374217787095 38.0 34.0 40.0 24.0 41.0 36 34.660867755985244 38.0 33.0 40.0 24.0 41.0 37 34.49810683670922 37.0 33.0 40.0 23.0 41.0 38 34.499342921344756 37.0 33.0 40.0 23.0 41.0 39 34.46581407606735 37.0 33.0 40.0 23.0 41.0 40 34.39116510587368 37.0 33.0 40.0 23.0 41.0 41 34.35573041544967 37.0 33.0 40.0 23.0 41.0 42 34.266446979934926 37.0 33.0 40.0 23.0 41.0 43 34.13850726630708 37.0 33.0 40.0 23.0 41.0 44 34.108014536577244 37.0 33.0 40.0 23.0 41.0 45 34.048228305109596 37.0 33.0 40.0 23.0 41.0 46 33.94681744864839 37.0 33.0 40.0 23.0 41.0 47 33.94098419127409 37.0 33.0 40.0 23.0 41.0 48 33.9001276111743 36.0 33.0 40.0 23.0 41.0 49 33.90099235521878 36.0 33.0 40.0 23.0 41.0 50 33.727998367211065 36.0 33.0 40.0 22.0 41.0 51 33.58118012594668 36.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 4.0 12 3.0 13 6.0 14 17.0 15 61.0 16 228.0 17 637.0 18 1521.0 19 2897.0 20 5036.0 21 8328.0 22 12686.0 23 18930.0 24 26359.0 25 36827.0 26 47406.0 27 52847.0 28 56577.0 29 62048.0 30 72153.0 31 87557.0 32 108013.0 33 136167.0 34 200312.0 35 270856.0 36 200877.0 37 247780.0 38 351445.0 39 515507.0 40 203.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.23157068747548 23.6210661477674 26.611764799131294 17.53559836562583 2 34.0841520395991 25.180656999393648 28.614705404452124 12.120485556555133 3 27.457604952264703 25.903126473770357 34.071866491762734 12.567402082202204 4 24.35764418675618 28.202624351541044 33.66232181001788 13.777409651684902 5 22.341348002013245 32.3475304067309 31.428254382175652 13.882867209080207 6 20.344074601016928 41.037256914583736 28.844682933788825 9.773985550610513 7 85.91212266525052 3.4197020556495685 9.347003317097915 1.3211719620019895 8 87.31869900011493 3.151401543223331 8.351873942353038 1.1780255143087002 9 82.46372791078315 5.339774659274202 9.579953156395025 2.61654427354763 10 39.961716647709935 36.65044445941608 14.684677544000094 8.703161348873891 11 29.0437088087378 23.826591473829804 32.37860095351704 14.751098763915365 12 27.779367413178825 23.843513825204397 32.78743228087141 15.589686480745376 13 20.493522345826282 31.532919323581517 32.84335133892656 15.130206991665643 14 15.957103622651381 35.60347799896167 33.21869464072699 15.220723737659961 15 15.766162430794717 26.757526879589744 42.25764775352813 15.21866293608741 16 19.1416365142334 24.0599772519211 39.60103674171419 17.197349492131305 17 18.690756908639116 24.263481407210428 33.07475557704426 23.9710061071062 18 20.053501579287357 25.4405557823318 36.09799111477476 18.407951523606087 19 25.080787384723912 25.725699384533684 31.470540445212404 17.722972785530004 20 26.27014730768164 26.60114374487276 30.49475090060992 16.63395804683568 21 22.108358531916664 28.36479358298095 32.55158939321283 16.97525849188956 22 20.76911492535539 25.095807457723847 32.16479279036496 21.970284826555805 23 18.176983224282584 29.47905314093901 32.25530953635928 20.088654098419127 24 17.40010066223066 27.21371701231329 38.81975516092086 16.56642716453519 25 17.878008473064927 28.646647828826648 35.8399549794118 17.635388718696625 26 17.913993238985608 32.364928327699154 31.625259086351548 18.095819346963687 27 17.856845626146818 31.95859374071153 32.8535364543909 17.33102417875076 28 16.22508708868184 29.10846553507524 37.460656523824056 17.205790852418865 29 17.126212207078854 26.44404725576529 37.62750218960167 18.802238347554184 30 18.652552817947996 30.08778222083074 33.803724502534386 17.45594045868687 31 23.817872697945937 27.98719132561061 30.591806728517135 17.60312924792632 32 25.04103769285338 27.41995569276619 30.75544229953751 16.783564314842923 33 24.297880941152226 27.61513738016637 29.663455250882777 18.423526427798627 34 19.216182048040455 27.915459578566075 31.135144989279866 21.733213384113597 35 19.934926227266782 27.87111271395678 32.6165839043471 19.57737715442934 36 24.43944215686663 28.041723305684247 29.570917334115382 17.947917203333745 37 19.689968255729625 32.50355686425262 29.753971996877095 18.05250288314066 38 19.171795552631682 33.65265189494668 27.99202628314621 19.18352626927543 39 20.09186419317637 32.32799242259114 28.530450324774403 19.04969305945809 40 22.2721922569344 28.349496094384712 28.99004870625255 20.388262942428337 41 17.967098510278248 28.26623178469379 29.335946324045192 24.430723380982762 42 19.259855189058726 28.54459852018595 28.66856366093473 23.52698262982059 43 19.80652243697712 28.27035338783889 29.77917718534136 22.143946989842625 44 18.88803902841132 30.433085376631304 31.32624470433442 19.352630890622958 45 18.07865921079226 33.84712022795636 28.526566506426132 19.547654054825248 46 20.102841924630148 32.445577004624916 28.825065688050127 18.626515382694812 47 19.433160675150297 29.796575106309618 29.234253692599744 21.53601052594034 48 19.43744080149329 28.67280415647825 32.48433592650864 19.405419115519816 49 19.637219661632237 28.361187180228985 32.385219297028875 19.6163738611099 50 18.75947671492377 32.77637528781868 29.600957480115248 18.863190517142304 51 18.189665080113663 32.50359649505209 29.273646707275024 20.033091717559216 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6350.0 1 5285.0 2 4220.0 3 20611.5 4 37003.0 5 26750.0 6 16497.0 7 16630.0 8 16763.0 9 17267.5 10 17772.0 11 18530.0 12 19288.0 13 19171.5 14 19055.0 15 18233.0 16 17411.0 17 17050.0 18 16689.0 19 16346.0 20 16003.0 21 17300.5 22 18598.0 23 20101.0 24 21604.0 25 24065.5 26 34116.0 27 41705.0 28 48450.5 29 55196.0 30 63642.0 31 72088.0 32 81368.0 33 90648.0 34 99022.0 35 107396.0 36 117261.0 37 127126.0 38 137756.0 39 148386.0 40 167181.0 41 185976.0 42 204102.5 43 222229.0 44 219709.5 45 217190.0 46 213620.0 47 210050.0 48 190939.0 49 171828.0 50 157866.5 51 143905.0 52 128739.5 53 113574.0 54 101073.0 55 88572.0 56 79559.5 57 70547.0 58 64351.0 59 58155.0 60 51191.0 61 44227.0 62 39740.5 63 35254.0 64 28667.5 65 22081.0 66 18391.0 67 14701.0 68 12534.5 69 10368.0 70 8717.5 71 7067.0 72 6111.0 73 5155.0 74 4117.5 75 2179.5 76 1279.0 77 1102.5 78 926.0 79 718.5 80 511.0 81 345.5 82 180.0 83 120.0 84 60.0 85 48.0 86 36.0 87 23.5 88 11.0 89 7.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2523290.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.012436883886572 #Duplication Level Percentage of deduplicated Percentage of total 1 76.77728209719488 16.132777941836622 2 6.750394646350563 2.8368448289553405 3 2.7738224398710876 1.7485430683469847 4 1.7086865316729531 1.4361467160449992 5 1.2001302639682014 1.260883071203698 6 0.9047016281950102 1.1405991516718241 7 0.6715128742028189 0.9877085320132799 8 0.560089085136104 0.9415069240620926 9 0.45238324716624634 0.855510698556757 >10 6.052026159604233 30.352817876007656 >50 1.50306781931504 22.114374285991268 >100 0.6425958891804368 18.54448311334421 >500 0.0021400293862712896 0.2859098395148762 >1k 7.781925040986508E-4 0.21105983720550556 >5k 1.945481260246627E-4 0.23906215920546126 >10k+ 1.945481260246627E-4 0.9117719560394336 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22304 0.8839253514261143 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5848 0.23176091531294463 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017675336564564516 0.0 2 0.0 0.0 0.0 0.06356780235327687 0.0 3 3.963079947211775E-5 0.0 0.0 0.10763725136627181 0.0 4 3.963079947211775E-5 0.0 0.0 0.15899876748213643 0.0 5 3.963079947211775E-5 0.0 0.0 0.3225947077030385 0.0 6 3.963079947211775E-5 0.0 0.0 0.5099691276072112 0.0 7 3.963079947211775E-5 0.0 0.0 0.6459820313955194 0.0 8 7.92615989442355E-5 0.0 0.0 0.889552924951155 0.0 9 7.92615989442355E-5 0.0 0.0 1.0245750587526603 0.0 10 7.92615989442355E-5 0.0 0.0 1.2321215555881408 0.0 11 7.92615989442355E-5 0.0 0.0 1.368808182967475 0.0 12 7.92615989442355E-5 0.0 0.0 1.511835738262348 0.0 13 1.1889239841635325E-4 0.0 0.0 1.5771076649929259 0.0 14 1.1889239841635325E-4 0.0 0.0 1.6139246777025233 0.0 15 1.1889239841635325E-4 0.0 0.0 1.6502661208184553 0.0 16 1.1889239841635325E-4 0.0 0.0 1.7103067820187137 0.0 17 1.58523197888471E-4 0.0 0.0 1.785526039416793 0.0 18 1.58523197888471E-4 0.0 0.0 1.9021594822632357 0.0 19 1.58523197888471E-4 0.0 0.0 1.9741686449040736 0.0 20 1.9815399736058877E-4 0.0 0.0 2.041580634806146 0.0 21 1.9815399736058877E-4 0.0 0.0 2.1151353986263963 0.0 22 1.9815399736058877E-4 0.0 0.0 2.208188515786929 0.0 23 1.9815399736058877E-4 0.0 0.0 2.3075825608630005 0.0 24 1.9815399736058877E-4 0.0 0.0 2.387597144997206 0.0 25 1.9815399736058877E-4 0.0 0.0 2.45485061170139 0.0 26 1.9815399736058877E-4 0.0 0.0 2.521271831616659 0.0 27 1.9815399736058877E-4 0.0 0.0 2.598234844191512 0.0 28 1.9815399736058877E-4 0.0 0.0 2.6744845023758663 0.0 29 1.9815399736058877E-4 0.0 0.0 2.7630593391960496 0.0 30 1.9815399736058877E-4 0.0 0.0 2.894118393050343 0.0 31 1.9815399736058877E-4 0.0 0.0 2.993710592123775 0.0 32 1.9815399736058877E-4 0.0 0.0 3.0869222324821957 0.0 33 1.9815399736058877E-4 0.0 0.0 3.179182733653286 0.0 34 1.9815399736058877E-4 0.0 0.0 3.2842439830538703 0.0 35 1.9815399736058877E-4 0.0 0.0 3.4081694930031823 0.0 36 1.9815399736058877E-4 0.0 0.0 3.5152519131768445 0.0 37 1.9815399736058877E-4 0.0 0.0 3.6300227084480974 0.0 38 1.9815399736058877E-4 0.0 0.0 3.7545426803894917 0.0 39 1.9815399736058877E-4 0.0 0.0 3.914294433061598 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTA 20 7.034892E-4 45.0 31 CGTTTTT 15865 0.0 43.0145 1 CGACGGT 285 0.0 42.63158 28 GCGTAAG 80 0.0 42.1875 1 GTTAGCG 150 0.0 42.0 1 ACGGGAT 1555 0.0 40.948555 5 ACGGGAC 830 0.0 40.120483 5 CTAGCGG 230 0.0 40.1087 2 TACGGGA 1170 0.0 39.423077 4 TAAGGGA 4370 0.0 37.6373 4 AGGGCGA 2095 0.0 37.5895 6 GGGCGAT 3975 0.0 37.584908 7 AAGGGAC 3335 0.0 37.57871 5 AACGTCG 30 1.14030845E-4 37.500004 13 AAGGGAT 5415 0.0 37.47922 5 GTAGGGA 3965 0.0 37.45271 4 AGCGGGA 2050 0.0 37.42683 4 CGGGATT 1770 0.0 37.37288 6 TAGGGAC 2805 0.0 37.299465 5 TCACGAC 320 0.0 37.265625 25 >>END_MODULE