##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545216_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1443228 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31430099748619 31.0 31.0 33.0 30.0 34.0 2 31.572617077828312 31.0 31.0 34.0 30.0 34.0 3 31.65051814404931 31.0 31.0 34.0 30.0 34.0 4 35.412125457654646 37.0 35.0 37.0 33.0 37.0 5 35.27003217786795 37.0 35.0 37.0 33.0 37.0 6 35.26588453106508 37.0 35.0 37.0 32.0 37.0 7 35.87331177055878 37.0 35.0 37.0 35.0 37.0 8 35.96576909538895 37.0 35.0 37.0 35.0 37.0 9 37.6146180645054 39.0 37.0 39.0 35.0 39.0 10 36.887022701887716 39.0 37.0 39.0 32.0 39.0 11 36.52502653773347 39.0 35.0 39.0 32.0 39.0 12 35.56758322316363 37.0 35.0 39.0 31.0 39.0 13 35.092338840432696 37.0 34.0 39.0 30.0 39.0 14 35.87519989911504 38.0 34.0 40.0 29.0 41.0 15 36.32443175991597 38.0 35.0 40.0 31.0 41.0 16 36.27623563290069 38.0 35.0 40.0 31.0 41.0 17 36.361284564878176 37.0 35.0 40.0 31.0 41.0 18 36.44654967891421 37.0 35.0 40.0 31.0 41.0 19 36.36905326116178 37.0 35.0 40.0 31.0 41.0 20 36.21770988367742 37.0 35.0 40.0 31.0 41.0 21 36.077513047141544 37.0 34.0 40.0 31.0 41.0 22 35.968366051656425 36.0 34.0 40.0 30.0 41.0 23 35.89333494084095 36.0 34.0 40.0 30.0 41.0 24 35.72296684931279 36.0 34.0 40.0 30.0 41.0 25 35.69951941065445 36.0 34.0 40.0 30.0 41.0 26 35.56701020213023 36.0 34.0 40.0 30.0 41.0 27 35.50992497373942 36.0 34.0 40.0 30.0 41.0 28 35.570118512113126 36.0 34.0 40.0 30.0 41.0 29 35.587960460855804 36.0 34.0 40.0 30.0 41.0 30 35.52666661123537 36.0 34.0 40.0 30.0 41.0 31 35.40079252896978 36.0 34.0 40.0 30.0 41.0 32 35.25267871743065 36.0 34.0 40.0 29.0 41.0 33 35.07247434223837 36.0 34.0 40.0 29.0 41.0 34 34.90649155919924 35.0 34.0 40.0 27.0 41.0 35 34.73667362329445 35.0 34.0 40.0 27.0 41.0 36 34.519334436416145 35.0 33.0 40.0 25.0 41.0 37 34.325726080702424 35.0 33.0 40.0 25.0 41.0 38 34.37905237426103 35.0 33.0 40.0 25.0 41.0 39 34.3808157823989 35.0 33.0 40.0 25.0 41.0 40 34.20386730301796 35.0 33.0 40.0 24.0 41.0 41 34.248648169242834 35.0 33.0 40.0 24.0 41.0 42 34.195703658742765 35.0 33.0 40.0 25.0 41.0 43 34.06861632396267 35.0 33.0 40.0 24.0 41.0 44 34.03263586903802 35.0 33.0 40.0 24.0 41.0 45 33.955962606047 35.0 33.0 39.0 24.0 41.0 46 33.88610531392129 35.0 33.0 39.0 23.0 41.0 47 33.920605753214325 35.0 33.0 39.0 24.0 41.0 48 33.88600345891294 35.0 33.0 39.0 24.0 41.0 49 33.86482870343425 35.0 33.0 39.0 24.0 41.0 50 33.64122508709642 35.0 33.0 39.0 24.0 41.0 51 33.47212429359741 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 4.0 13 8.0 14 7.0 15 50.0 16 107.0 17 308.0 18 671.0 19 1418.0 20 2500.0 21 4191.0 22 6430.0 23 9137.0 24 13125.0 25 17596.0 26 22907.0 27 27392.0 28 30939.0 29 35637.0 30 43887.0 31 54625.0 32 68784.0 33 91869.0 34 157074.0 35 226158.0 36 101154.0 37 121861.0 38 165756.0 39 239449.0 40 180.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.29300706471881 24.04159287375245 28.860166238459893 13.805233823068845 2 31.224241769145276 26.552630630780445 29.60433140155263 12.618796198521649 3 28.90568919117423 26.93579947173974 31.319445021853788 12.839066315232243 4 27.11913848678102 27.207274249113794 31.290620747380178 14.382966516725007 5 23.910497856194585 32.13123636736538 29.514879145914573 14.443386630525461 6 21.649039514200112 41.67927728674887 26.831242187651572 9.840441011399447 7 86.09110965142028 5.523659463369613 6.620644832278753 1.7645860529313457 8 87.94182208216581 4.491459422904766 6.072845039037491 1.4938734558919313 9 83.71768008935526 5.775040395557736 7.391624885326505 3.115654629760509 10 53.824274473610544 22.325994229601974 12.907939701835053 10.941791594952425 11 47.67611215968648 20.70975618543986 19.209715997749488 12.40441565712417 12 42.99043532969149 21.854966782795234 22.578345209488727 12.576252678024538 13 21.34624605398454 42.8448588857755 21.949962168139752 13.85893289210021 14 14.837225996169698 43.994850432502695 26.567735659230557 14.600187912097049 15 13.805164533947512 24.318402913468972 48.12219552281414 13.754237029769378 16 15.208823553866749 19.62212484791038 46.244876069477584 18.924175528745284 17 15.601207847963039 20.085253334885408 28.93264265937191 35.380896157779645 18 19.576532606074714 24.45226949588007 36.38468765849886 19.58651023954635 19 31.850615425975658 22.90615204250472 25.84033846349988 19.402894068019744 20 32.7255291610196 22.49589115510508 25.810821297812957 18.967758386062357 21 21.50644250250134 30.66036689975527 28.0577982134493 19.775392384294097 22 21.761911492847975 25.399382495350697 23.735334957470336 29.103371054330985 23 19.13654668562417 32.34388468072959 25.42730601124701 23.092262622399232 24 17.847907607114053 23.960316734431427 41.51887297086808 16.67290268758644 25 16.985396624788322 26.352454359255777 37.92540056041042 18.736748455545484 26 15.719276510710712 37.41293821904786 26.543484466764777 20.32430080347665 27 16.729234743228375 38.810430507168654 27.478679737366512 16.98165501223646 28 14.952869539670793 30.78474087254405 38.05670344533227 16.20568614245289 29 15.339987860545943 26.030259945067584 37.16065652828243 21.46909566610404 30 17.828991676990746 35.07387606116289 29.734525660533194 17.362606601313168 31 30.040367842087324 27.766853192981287 24.61114945109158 17.581629513839808 32 32.1461335284515 25.67944912376977 26.345040423273385 15.829376924505345 33 30.62288148511531 27.31328660474991 23.13307391486307 18.930757995271712 34 19.56128899938194 27.375231079219635 26.813296305226896 26.250183616171523 35 21.5457294342959 24.61544537661409 31.601521034791453 22.23730415429856 36 31.528975324758115 27.437660577538686 23.932601085899112 17.100763011804094 37 20.218149869597873 37.123448270127795 26.58436504834995 16.07403681192438 38 19.581867868417188 37.825554936572736 22.70167984545754 19.89089734955253 39 21.562774558143275 35.14108650885376 25.07254571003334 18.22359322296962 40 25.443450376517085 26.33714146344167 26.020005155110624 22.199403004930616 41 17.028078723528093 25.582860088634646 27.15225868677714 30.236802501060122 42 19.798327083454588 25.747560330037945 24.498970363657023 29.955142222850444 43 20.292704964149806 26.14236974338081 26.267713763868215 27.29721152860116 44 18.090488820893164 30.613596742856984 30.490331396009502 20.80558304024035 45 16.693550845743015 40.56995845424285 22.74165966846541 19.994831031548724 46 19.80186082864246 37.21567209061909 24.758111677434197 18.22435540330426 47 21.493000412963163 28.177806971594233 26.182003120782028 24.14718949466058 48 21.788934250166985 25.959654330431505 32.93519804216658 19.31621337723492 49 21.06382359544022 26.849118780954917 33.54217074502435 18.544886878580517 50 19.24276690862428 36.86797927978115 25.983836233775953 17.90541757781861 51 18.55770536602671 35.76385713137494 24.880199109219056 20.798238393379286 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4190.0 1 4158.5 2 4127.0 3 7475.5 4 10824.0 5 8156.0 6 5488.0 7 5594.5 8 5701.0 9 5963.5 10 6226.0 11 6537.0 12 6848.0 13 6805.5 14 6763.0 15 6606.0 16 6449.0 17 6133.0 18 5817.0 19 6192.5 20 6568.0 21 6450.5 22 6333.0 23 7094.5 24 7856.0 25 8319.5 26 10952.5 27 13122.0 28 18186.5 29 23251.0 30 25129.0 31 27007.0 32 32932.5 33 38858.0 34 41831.5 35 44805.0 36 46971.0 37 49137.0 38 57439.5 39 65742.0 40 89335.0 41 112928.0 42 134942.0 43 156956.0 44 157232.0 45 157508.0 46 144114.5 47 130721.0 48 120421.5 49 110122.0 50 95166.0 51 80210.0 52 72446.0 53 64682.0 54 58592.0 55 52502.0 56 47999.0 57 43496.0 58 42013.0 59 40530.0 60 37756.0 61 34982.0 62 32591.0 63 30200.0 64 25368.0 65 20536.0 66 18228.5 67 15921.0 68 13855.0 69 11789.0 70 10437.5 71 9086.0 72 8090.5 73 7095.0 74 5579.5 75 3383.0 76 2702.0 77 2213.0 78 1724.0 79 1372.5 80 1021.0 81 653.0 82 285.0 83 230.0 84 175.0 85 129.0 86 83.0 87 46.0 88 9.0 89 5.0 90 1.0 91 1.5 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1443228.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.520551989818774 #Duplication Level Percentage of deduplicated Percentage of total 1 78.34166517948748 13.725892177461855 2 7.0155128387800065 2.458313148541724 3 2.468590041806423 1.2975318050705498 4 1.3233644960501219 0.9274430581810591 5 0.8357766162999476 0.7321633828879024 6 0.6152482022553544 0.6467692868554482 7 0.4827009255734256 0.5920030663429993 8 0.40674668217026066 0.5701141113320275 9 0.3590818648535092 0.5662181233590288 >10 5.39633572963728 23.764434773685352 >50 1.5213384443666778 18.45200896379128 >100 1.2226207013706776 33.923883499948126 >500 0.007753602578786006 0.8221627469147688 >1k 0.0028565904237632654 1.0932140534243688 >5k 4.08084346251895E-4 0.42784780220349394 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5984 0.4146261020434748 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3636 0.2519352451587691 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2967 0.20558082298846753 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2722 0.18860498826242283 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1715 0.1188308430823127 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1605 0.1112090397359253 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1595 0.11051614852261736 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014412137236805272 0.0 2 0.0 0.0 0.0 0.05848001840319063 0.0 3 0.0 0.0 0.0 0.08758144936212435 0.0 4 0.0 0.0 0.0 0.11966231253828225 0.0 5 0.0 0.0 0.0 0.21403409579082447 0.0 6 0.0 0.0 0.0 0.2926772485012763 0.0 7 0.0 0.0 0.0 0.3493557497498663 0.0 8 0.0 0.0 0.0 0.4858553187715316 0.0 9 0.0 0.0 0.0 0.5514721166717941 0.0 10 0.0 0.0 0.0 0.6944155739772233 0.0 11 0.0 0.0 0.0 0.8248177003217787 0.0 12 0.0 0.0 0.0 0.9489145166252317 0.0 13 6.928912133079458E-5 0.0 0.0 0.9953382279168641 0.0 14 6.928912133079458E-5 0.0 0.0 1.015570651345456 0.0 15 6.928912133079458E-5 0.0 0.0 1.046335021216329 0.0 16 6.928912133079458E-5 0.0 0.0 1.1129911559365533 0.0 17 6.928912133079458E-5 0.0 0.0 1.1896249241284123 0.0 18 6.928912133079458E-5 0.0 0.0 1.3130288492185573 0.0 19 6.928912133079458E-5 0.0 0.0 1.371162422015094 0.0 20 6.928912133079458E-5 0.0 0.0 1.4303353316315925 0.0 21 6.928912133079458E-5 0.0 0.0 1.506761232459459 0.0 22 6.928912133079458E-5 0.0 0.0 1.585404385169911 0.0 23 6.928912133079458E-5 0.0 0.0 1.6821319985477001 0.0 24 6.928912133079458E-5 0.0 0.0 1.7595279470741976 0.0 25 6.928912133079458E-5 0.0 0.0 1.8205716629666275 0.0 26 6.928912133079458E-5 0.0 0.0 1.8783587901565102 0.0 27 6.928912133079458E-5 0.0 0.0 1.940857577596887 0.0 28 6.928912133079458E-5 0.0 0.0 2.0060586407691647 0.0 29 6.928912133079458E-5 0.0 0.0 2.077079990133229 0.0 30 6.928912133079458E-5 0.0 0.0 2.1790735767321587 0.0 31 6.928912133079458E-5 0.0 0.0 2.263051991785082 0.0 32 6.928912133079458E-5 0.0 0.0 2.34924765872059 0.0 33 6.928912133079458E-5 0.0 0.0 2.426920763732411 0.0 34 6.928912133079458E-5 0.0 0.0 2.5084740595387562 0.0 35 6.928912133079458E-5 0.0 0.0 2.6263348549224377 0.0 36 6.928912133079458E-5 0.0 0.0 2.720152325204334 0.0 37 6.928912133079458E-5 0.0 0.0 2.8129997477875985 0.0 38 6.928912133079458E-5 0.0 0.0 2.9027291599109772 0.0 39 6.928912133079458E-5 0.0 0.0 2.994606534795611 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCGT 25 3.891304E-5 45.0 34 ACGTTAG 25 3.891304E-5 45.0 1 TAGACCC 20 7.0338877E-4 45.0 1 CTCGCAC 20 7.0338877E-4 45.0 43 CGTCGAA 25 3.891304E-5 45.0 42 CACCGTT 20 7.0338877E-4 45.0 36 GTGCGAT 25 3.891304E-5 45.0 8 CTCGATG 60 0.0 44.999996 1 TATAGCG 60 0.0 44.999996 1 CGGTCTA 60 0.0 44.999996 31 TCACGAC 70 0.0 41.785713 25 GCGATAC 65 0.0 41.538464 9 CGTTAGG 195 0.0 41.53846 2 ACGGGTA 120 0.0 41.249996 5 TATACCC 55 6.184564E-11 40.909092 15 CTACGAA 320 0.0 40.78125 11 TACGAAT 320 0.0 40.78125 12 CGAATAT 320 0.0 40.78125 14 GCTACGA 320 0.0 40.78125 10 ACGGGAT 255 0.0 40.588234 5 >>END_MODULE