##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545215_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 150266 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.203964968788682 31.0 31.0 33.0 30.0 34.0 2 31.47463830806703 31.0 31.0 34.0 30.0 34.0 3 31.56955665286891 31.0 31.0 34.0 30.0 34.0 4 35.35220209495162 37.0 35.0 37.0 33.0 37.0 5 35.19860780216416 37.0 35.0 37.0 32.0 37.0 6 35.183647664807744 37.0 35.0 37.0 32.0 37.0 7 35.823206846525494 37.0 35.0 37.0 35.0 37.0 8 35.90323160262468 37.0 35.0 37.0 35.0 37.0 9 37.54822780935142 39.0 37.0 39.0 35.0 39.0 10 36.75431568019379 39.0 37.0 39.0 32.0 39.0 11 36.43930762780669 38.0 35.0 39.0 32.0 39.0 12 35.58059707452118 37.0 35.0 39.0 31.0 39.0 13 35.233632358617385 37.0 35.0 39.0 30.0 39.0 14 36.032888344668784 38.0 35.0 40.0 30.0 41.0 15 36.42108660641795 38.0 35.0 40.0 31.0 41.0 16 36.317337255267326 38.0 35.0 40.0 31.0 41.0 17 36.3856161739848 38.0 35.0 40.0 31.0 41.0 18 36.44689417433085 38.0 35.0 40.0 31.0 41.0 19 36.371441310742284 37.0 35.0 40.0 31.0 41.0 20 36.255506901095394 37.0 35.0 40.0 31.0 41.0 21 36.14120958833003 37.0 34.0 40.0 31.0 41.0 22 36.01613139366191 37.0 34.0 40.0 30.0 41.0 23 35.931235276110364 37.0 34.0 40.0 30.0 41.0 24 35.732095084716434 37.0 34.0 40.0 30.0 41.0 25 35.696411696591376 36.0 34.0 40.0 30.0 41.0 26 35.563154672380975 36.0 34.0 40.0 29.0 41.0 27 35.5373404496027 36.0 34.0 40.0 29.0 41.0 28 35.55083651657727 36.0 34.0 40.0 29.0 41.0 29 35.53694115768038 36.0 34.0 40.0 29.0 41.0 30 35.47090492859329 36.0 34.0 40.0 29.0 41.0 31 35.370556213647795 36.0 34.0 40.0 29.0 41.0 32 35.23123660708344 36.0 34.0 40.0 29.0 41.0 33 35.058270001197876 36.0 34.0 40.0 27.0 41.0 34 34.90882834440259 36.0 34.0 40.0 27.0 41.0 35 34.75881436918531 36.0 33.0 40.0 27.0 41.0 36 34.558948797465824 36.0 33.0 40.0 25.0 41.0 37 34.39400795921898 35.0 33.0 40.0 25.0 41.0 38 34.421226358590765 35.0 33.0 40.0 25.0 41.0 39 34.43289233758801 35.0 33.0 40.0 25.0 41.0 40 34.25353040607988 35.0 33.0 40.0 24.0 41.0 41 34.273009197023946 35.0 33.0 40.0 24.0 41.0 42 34.181744373311325 35.0 33.0 40.0 24.0 41.0 43 34.06730730837315 35.0 33.0 40.0 24.0 41.0 44 33.99472934662532 35.0 33.0 40.0 24.0 41.0 45 33.93114210799516 35.0 33.0 39.0 23.0 41.0 46 33.857040182077114 35.0 33.0 39.0 23.0 41.0 47 33.87929405188133 35.0 33.0 39.0 23.0 41.0 48 33.83825349713175 35.0 33.0 39.0 23.0 41.0 49 33.8299016410898 35.0 33.0 39.0 24.0 41.0 50 33.61974764750509 35.0 33.0 39.0 24.0 41.0 51 33.45227130555149 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 3.0 16 12.0 17 30.0 18 71.0 19 178.0 20 270.0 21 506.0 22 685.0 23 946.0 24 1323.0 25 1860.0 26 2435.0 27 2980.0 28 3282.0 29 3885.0 30 4795.0 31 5782.0 32 7244.0 33 9477.0 34 15378.0 35 21560.0 36 11220.0 37 13630.0 38 18122.0 39 24575.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.538751281061586 23.97881090865532 27.915163776236806 13.567274034046292 2 31.96331838206913 26.481705775092166 28.72372991894374 12.83124592389496 3 30.011446368439966 25.776290045652377 30.60572584616613 13.606537739741526 4 26.922923349260646 28.20598139299642 30.101952537500164 14.76914272024277 5 23.394513728987263 32.74526506328777 28.419602571439977 15.44061863628499 6 21.300227596395725 41.57028203319447 27.048700304792835 10.080790065616972 7 87.19337707798172 4.840083585109074 6.153088523019179 1.813450813890035 8 88.40988646799676 3.9855988713348327 5.9780655637336455 1.626449096934769 9 84.40698494669454 5.705881570015839 7.1712829249464285 2.7158505583432047 10 51.213847443866214 24.047356021987675 13.138700704084757 11.600095830061358 11 43.98799462286878 22.35435827133217 19.468143159463885 14.189503946335167 12 39.468675548693646 21.85723982803828 24.766746968708823 13.90733765455925 13 21.584390347783263 38.33002808353187 24.344163017582154 15.741418551102711 14 15.808632691360655 40.71979023864347 27.382774546470923 16.08880252352495 15 15.684186708902878 23.834400330081323 45.222472149388416 15.258940811627381 16 17.759173731915403 19.319074175129437 43.393715145142615 19.528036947812545 17 16.939294318075945 20.146273940878174 29.94157028203319 32.972861459012684 18 21.473254096069635 23.45041459811268 34.86417419775598 20.212157108061703 19 31.16473453742031 23.521621657593865 25.593281247920352 19.72036255706547 20 31.959990949383094 22.542690961361853 25.85282099743122 19.64449709182383 21 23.489678303807914 28.724395405480944 27.519199286598433 20.266727004112706 22 22.86012803960976 25.361026446434987 23.745225134095538 28.033620379859713 23 19.959937710460117 30.865265595677 25.760983855296608 23.413812838566276 24 19.731010341660788 23.820425112799967 38.97288807847417 17.47567646706507 25 18.97634860846765 25.51941224229034 34.98196531484168 20.52227383440033 26 17.691294105120253 35.3732713987196 25.930017435747278 21.005417060412867 27 18.678210639798756 35.52367135612847 27.213740966020257 18.584377038052523 28 16.821503200990243 28.800926357259794 36.25836849320538 18.119201948544582 29 17.25739688286106 25.929351949210066 34.83622376319327 21.9770274047356 30 19.547336057391558 32.72796241332038 28.724395405480944 19.000306123807114 31 29.584869498090054 27.69621870549559 24.298244446514847 18.42066734989951 32 31.570681325116794 25.58196797678783 25.862137808952124 16.985212889143252 33 30.268324171802004 26.446434988620183 23.496333169179987 19.78890767039783 34 20.991441843131515 26.581528755673272 26.69532695353573 25.731702447659483 35 22.10546630641662 25.019631852847617 30.995700956969642 21.87920088376612 36 30.85794524376772 27.32421173119668 23.745225134095538 18.072617890940066 37 20.853686129929592 35.24549798357579 26.487029667389827 17.413786219104786 38 20.774493232001916 35.536315600335406 23.329961534878148 20.35922963278453 39 22.41757949236687 33.79274087285214 24.211065710140684 19.578613924640305 40 25.979928926037825 25.90073602811015 26.101047475809562 22.018287570042457 41 18.08126921592376 25.46351137316492 27.18845247760638 29.26676693330494 42 20.789799422357685 26.454420827066667 24.014081695127306 28.74169805544834 43 21.42267711924188 25.552021082613496 25.83219091477779 27.193110883366828 44 18.704164614749843 30.245697629536956 29.89897914365192 21.151158612061277 45 18.45860008252033 37.97399278612594 23.101699652616027 20.465707478737706 46 20.76584190701822 34.98263080137889 24.77539829369252 19.476128997910372 47 21.362783330893215 28.22594598911264 26.13764923535597 24.273621444638174 48 21.911144237552076 25.40561404442788 32.36859968322841 20.314642034791635 49 21.86389469341035 26.58884910758255 31.539403457868048 20.007852741139047 50 19.02426363914658 35.347317423768516 25.961295302996017 19.66712363408888 51 18.719470805105612 34.00902399744453 25.608587438276125 21.662917759173734 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 384.0 1 370.0 2 356.0 3 736.0 4 1116.0 5 846.0 6 576.0 7 573.5 8 571.0 9 584.0 10 597.0 11 612.5 12 628.0 13 626.0 14 624.0 15 604.5 16 585.0 17 554.0 18 523.0 19 528.0 20 533.0 21 528.5 22 524.0 23 577.5 24 631.0 25 780.5 26 1203.5 27 1477.0 28 1906.5 29 2336.0 30 2505.5 31 2675.0 32 3204.0 33 3733.0 34 4037.5 35 4342.0 36 4595.0 37 4848.0 38 5839.5 39 6831.0 40 8870.0 41 10909.0 42 12620.0 43 14331.0 44 14507.5 45 14684.0 46 13305.5 47 11927.0 48 11133.5 49 10340.0 50 9690.5 51 9041.0 52 8302.5 53 7564.0 54 6893.5 55 6223.0 56 5952.5 57 5682.0 58 5752.5 59 5823.0 60 5521.0 61 5219.0 62 4586.0 63 3953.0 64 3419.5 65 2886.0 66 2497.5 67 2109.0 68 1841.5 69 1574.0 70 1364.5 71 1155.0 72 1048.5 73 942.0 74 723.5 75 404.0 76 303.0 77 231.5 78 160.0 79 112.0 80 64.0 81 47.0 82 30.0 83 21.5 84 13.0 85 9.0 86 5.0 87 4.0 88 3.0 89 1.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 150266.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.952257995820744 #Duplication Level Percentage of deduplicated Percentage of total 1 65.74694184377776 25.60991841135054 2 9.984282102097998 7.778206646879533 3 5.9847604729037105 6.993598019512065 4 4.211371557438666 6.561697256864493 5 2.9556481924417413 5.756458546843597 6 2.2773867286270755 5.322561324584404 7 1.6059591334654548 4.378901414824378 8 1.260848766486708 3.929032515672208 9 0.9909109546914507 3.473839724222379 >10 4.951137839130732 28.621244992213807 >50 0.020501605959133466 0.5057697682775877 >100 0.008542335816305612 0.6814582141003288 >500 0.0017084671632611223 0.387313164654679 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 582 0.387313164654679 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 329 0.2189450707412189 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 204 0.1357592535902999 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 196 0.13043536129264105 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 170 0.11313271132524988 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014640703818561751 0.0 2 0.0 0.0 0.0 0.04591857106730731 0.0 3 0.0 0.0 0.0 0.06721414025794258 0.0 4 0.0 0.0 0.0 0.09117165559740727 0.0 5 0.0 0.0 0.0 0.17502295928553366 0.0 6 0.0 0.0 0.0 0.26486364180852623 0.0 7 0.0 0.0 0.0 0.32675388976881 0.0 8 0.0 0.0 0.0 0.493125524070648 0.0 9 0.0 0.0 0.0 0.5530193124193098 0.0 10 0.0 0.0 0.0 0.6628245910585229 0.0 11 0.0 0.0 0.0 0.7866050869790904 0.0 12 0.0 0.0 0.0 0.8811041752625345 0.0 13 0.0 0.0 0.0 0.9290192059414638 0.0 14 0.0 0.0 0.0 0.946321855908855 0.0 15 0.0 0.0 0.0 0.982258128918052 0.0 16 0.0 0.0 0.0 1.0308386461341887 0.0 17 0.0 0.0 0.0 1.0874050017968135 0.0 18 0.0 0.0 0.0 1.173252765096562 0.0 19 0.0 0.0 0.0 1.21650939001504 0.0 20 0.0 0.0 0.0 1.2557730957102737 0.0 21 0.0 0.0 0.0 1.3096775052240692 0.0 22 6.654865372073522E-4 0.0 0.0 1.3609199685890354 0.0 23 6.654865372073522E-4 0.0 0.0 1.4401128665167104 0.0 24 6.654865372073522E-4 0.0 0.0 1.5086579798490676 0.0 25 6.654865372073522E-4 0.0 0.0 1.5579039836024118 0.0 26 6.654865372073522E-4 0.0 0.0 1.6151358258022441 0.0 27 6.654865372073522E-4 0.0 0.0 1.655065018034685 0.0 28 6.654865372073522E-4 0.0 0.0 1.7089694275484808 0.0 29 6.654865372073522E-4 0.0 0.0 1.7681977293599351 0.0 30 6.654865372073522E-4 0.0 0.0 1.856707438808513 0.0 31 6.654865372073522E-4 0.0 0.0 1.9325729040501511 0.0 32 6.654865372073522E-4 0.0 0.0 1.9991215577708863 0.0 33 6.654865372073522E-4 0.0 0.0 2.067001184566036 0.0 34 6.654865372073522E-4 0.0 0.0 2.14153567673326 0.0 35 6.654865372073522E-4 0.0 0.0 2.238696711165533 0.0 36 6.654865372073522E-4 0.0 0.0 2.317224122556001 0.0 37 6.654865372073522E-4 0.0 0.0 2.3977479935580903 0.0 38 6.654865372073522E-4 0.0 0.0 2.4815992972462166 0.0 39 6.654865372073522E-4 0.0 0.0 2.558130249025062 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGGGC 45 3.8016879E-10 45.000004 4 AACGGGA 45 3.8016879E-10 45.000004 4 TAGGGTA 45 3.8016879E-10 45.000004 5 GAACGGG 30 2.1528795E-6 45.000004 3 TGATCCT 50 2.1827873E-11 45.0 18 GTGTTAG 20 7.0137036E-4 45.0 1 ATGGGTA 25 3.8745828E-5 45.0 5 CATATGC 50 2.1827873E-11 45.0 33 TTAGCGG 25 3.8745828E-5 45.0 2 GACGTTC 20 7.0137036E-4 45.0 12 ACCTGGT 50 2.1827873E-11 45.0 11 AGGGTGC 25 3.8745828E-5 45.0 6 CGACAAT 25 3.8745828E-5 45.0 20 GCTTGAG 25 3.8745828E-5 45.0 1 GTAATTT 25 3.8745828E-5 45.0 9 CTACGGG 25 3.8745828E-5 45.0 3 CGGGACT 25 3.8745828E-5 45.0 6 CTACCTT 20 7.0137036E-4 45.0 17 AATTCGC 20 7.0137036E-4 45.0 13 GCGATGA 40 6.7466317E-9 45.0 9 >>END_MODULE