SRR1545211_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545211_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1535211
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6618	0.43108080908748053	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6081	0.3961019039076713	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5120	0.33350464528980056	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	3377	0.2199697631139954	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2034	0.13248993135145593	No Hit
TGTAATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA	1674	0.10904038597951682	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCGTA	30	2.1659798E-6	45.000004	39
CGTCTAC	30	2.1659798E-6	45.000004	18
TCTAGTC	85	0.0	45.000004	37
CCGTCTA	30	2.1659798E-6	45.000004	17
CGACTGG	85	0.0	45.000004	2
GACTACG	30	2.1659798E-6	45.000004	1
CGACGGT	50	2.1827873E-11	45.0	28
ACGTTAG	35	1.2122837E-7	45.0	1
CTATCGA	20	7.034029E-4	45.0	23
GCAACCG	20	7.034029E-4	45.0	8
CTATACG	35	1.2122837E-7	45.0	1
CACGCGT	20	7.034029E-4	45.0	38
GAATCGT	20	7.034029E-4	45.0	8
GCCGGAC	20	7.034029E-4	45.0	18
GTTAGCG	40	6.8175723E-9	45.0	1
CGATTAC	20	7.034029E-4	45.0	10
AGGCGAT	45	3.8562575E-10	45.0	6
CGTTATC	20	7.034029E-4	45.0	44
ACGATTG	40	6.8175723E-9	45.0	1
CCACTTG	25	3.8914204E-5	45.0	1