##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545209_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2919771 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.198296030750356 31.0 31.0 33.0 30.0 34.0 2 31.452000173986246 31.0 31.0 34.0 30.0 34.0 3 31.547314498294558 31.0 31.0 34.0 30.0 34.0 4 35.30892456976934 37.0 35.0 37.0 33.0 37.0 5 35.16853342265541 37.0 35.0 37.0 32.0 37.0 6 35.15532040012727 37.0 35.0 37.0 32.0 37.0 7 35.812516461051224 37.0 35.0 37.0 35.0 37.0 8 35.89607164397482 37.0 35.0 37.0 35.0 37.0 9 37.54586609703295 39.0 37.0 39.0 35.0 39.0 10 36.74941219705244 39.0 37.0 39.0 32.0 39.0 11 36.40035639781339 38.0 35.0 39.0 32.0 39.0 12 35.4419230138254 37.0 35.0 39.0 30.0 39.0 13 34.98826620306867 37.0 34.0 39.0 29.0 39.0 14 35.74554271550748 38.0 34.0 40.0 27.0 41.0 15 36.19780695129858 38.0 35.0 40.0 30.0 41.0 16 36.12649930422626 37.0 35.0 40.0 31.0 41.0 17 36.18532549299243 37.0 34.0 40.0 31.0 41.0 18 36.27416910435784 37.0 35.0 40.0 31.0 41.0 19 36.20325189886467 37.0 35.0 40.0 31.0 41.0 20 36.04429354219903 36.0 34.0 40.0 31.0 41.0 21 35.91692773166115 36.0 34.0 40.0 30.0 41.0 22 35.78133661852248 36.0 34.0 40.0 30.0 41.0 23 35.71531705739937 36.0 34.0 40.0 30.0 41.0 24 35.544043008852405 36.0 34.0 40.0 30.0 41.0 25 35.51257204760236 36.0 34.0 40.0 30.0 41.0 26 35.374028990629746 36.0 34.0 40.0 29.0 41.0 27 35.323861700112786 36.0 34.0 40.0 29.0 41.0 28 35.368521709408036 36.0 34.0 40.0 29.0 41.0 29 35.36335692079961 36.0 34.0 40.0 29.0 41.0 30 35.27386805335076 36.0 34.0 40.0 29.0 41.0 31 35.143773604162796 36.0 34.0 40.0 29.0 41.0 32 34.98645236218868 35.0 34.0 40.0 28.0 41.0 33 34.80203173468056 35.0 34.0 40.0 27.0 41.0 34 34.628368800155904 35.0 34.0 40.0 26.0 41.0 35 34.45617515894226 35.0 33.0 40.0 25.0 41.0 36 34.24052228753556 35.0 33.0 40.0 24.0 41.0 37 34.04455383658513 35.0 33.0 40.0 23.0 41.0 38 34.10634566888979 35.0 33.0 40.0 24.0 41.0 39 34.0928247455023 35.0 33.0 40.0 24.0 41.0 40 33.92031498360659 35.0 33.0 40.0 23.0 41.0 41 33.94693316701892 35.0 33.0 40.0 23.0 41.0 42 33.87986523600652 35.0 33.0 39.0 23.0 41.0 43 33.7398172664911 35.0 33.0 39.0 23.0 41.0 44 33.715871210447666 35.0 33.0 39.0 23.0 41.0 45 33.66116931773074 35.0 33.0 39.0 23.0 41.0 46 33.57987561353271 35.0 33.0 39.0 23.0 41.0 47 33.58008213657852 35.0 33.0 39.0 23.0 41.0 48 33.57849536830114 35.0 33.0 39.0 23.0 41.0 49 33.56158068560856 35.0 33.0 39.0 24.0 41.0 50 33.3301885661581 35.0 32.0 39.0 23.0 40.0 51 33.13573838496238 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 5.0 12 10.0 13 8.0 14 37.0 15 106.0 16 332.0 17 868.0 18 1874.0 19 3556.0 20 6266.0 21 10062.0 22 15087.0 23 21721.0 24 29937.0 25 39953.0 26 51528.0 27 61262.0 28 68296.0 29 79015.0 30 94754.0 31 115925.0 32 144148.0 33 188233.0 34 311328.0 35 441803.0 36 206990.0 37 247571.0 38 330388.0 39 448389.0 40 316.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.10373621766912 24.291494093201145 27.533563419870944 14.071206269258788 2 32.05497965422631 26.192465094009087 28.738794926040434 13.013760325724174 3 29.46196807900346 26.288979512434363 30.610140315798738 13.638912092763439 4 26.368574795763095 28.127103118703488 30.30378067321033 15.20054141232309 5 23.580890419145888 32.481759699647675 29.23619694832232 14.70115293288412 6 21.15597421852604 41.333104548267656 27.129867376585352 10.381053856620948 7 85.94684309146162 5.192016771178288 6.882252067028545 1.9788880703315432 8 87.41274572560657 4.459219575781799 6.385295285143938 1.7427394134677001 9 83.69115249106865 5.250857002141606 7.848046987246603 3.2099435195431423 10 53.08450559992547 22.464638493909284 13.540616712749049 10.910239193416196 11 46.63711640399196 20.958835470315996 19.76240602430807 12.64164210138398 12 42.20594697323865 21.224369993400167 23.326795149345617 13.24288788401556 13 21.569362802767753 41.21124567645887 22.86806054310424 14.351330977669138 14 15.373876923909444 42.81808402097288 27.247034099592053 14.561004955525622 15 14.22036180234683 22.69876644435471 48.33755797971827 14.743313773580189 16 16.341452805716614 18.056587314553095 45.94634305224622 19.655616827484074 17 15.932482376186352 19.179312350180886 29.765724777730856 35.122480495901904 18 20.214838766464904 23.12058034688337 36.08450799737376 20.58007288927796 19 30.947598287673934 23.237130583186147 25.817983670637183 19.99728745850274 20 32.301505837272856 22.67051080375824 25.733422244415742 19.29456111455316 21 22.393845270742123 29.963925253042106 28.037575549589334 19.604653926626437 22 21.460689896570656 25.372400780746162 24.012362613369337 29.154546709313845 23 19.609722817303137 31.4117442772053 25.236876453667083 23.741656451824475 24 18.410621928911546 23.507939492514996 41.2887175055852 16.792721072988257 25 17.78755936681336 24.653337539142626 38.214298313121134 19.344804780922885 26 16.150410426023136 35.28828116999587 27.598363022305517 20.96294538167548 27 16.931464830632265 37.57130268092943 27.41814340919202 18.079089079246284 28 15.871963931417909 29.82196206483317 37.369780027269265 16.936293976479664 29 16.291859875312138 25.669958363173002 36.52272729607905 21.515454465435816 30 18.643242911858497 33.742029768772966 29.478373475180074 18.136353844188466 31 29.506457869469898 27.999832863604713 24.39256366338319 18.101145603542196 32 32.25321437879888 25.00935861065817 26.37987705200168 16.35754995854127 33 30.919787887474737 26.37665762143675 23.345837738644573 19.35771675244394 34 20.49331951033146 26.263566560528208 26.98454776076617 26.258566168374166 35 20.821735677215784 24.355437464102494 32.18738729852444 22.635439560157288 36 32.06182950649212 26.406385980270368 23.99153906248127 17.54024545075624 37 20.671107425890593 35.99162400064937 26.20825400348178 17.129014569978263 38 20.42177280341506 36.090056377709075 23.01296916778747 20.47520165108839 39 21.252385889167336 34.13510854104654 25.029668422626294 19.58283714715983 40 25.639716265419445 24.721801812539407 25.926314084220987 23.712167837820157 41 17.506304432779146 24.369753655338037 27.514452332049327 30.609489579833486 42 19.48375403413487 25.77630231959972 24.885650278737614 29.854293367527795 43 20.182815707122238 25.272290189881332 26.92495404605361 27.61994005694282 44 18.25920594457579 29.09211030591098 30.715525292908247 21.933158456604986 45 17.30399404610841 38.377907034490036 23.921567821586006 20.396531097815547 46 20.96883625462408 35.08710100894899 24.723308780037886 19.220753956389043 47 20.953047345151383 27.975241893970455 26.293226420839165 24.778484340038997 48 20.916606131097268 25.005385696343996 32.93624739748425 21.141760775074484 49 21.392876359139123 25.848157269868082 33.83840719015293 18.920559180839867 50 19.87604507339788 35.51244258539454 25.389285666581387 19.222226674626196 51 17.94205778466873 34.682171992255554 25.317327968529042 22.058442254546677 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9031.0 1 8513.5 2 7996.0 3 15600.5 4 23205.0 5 17353.5 6 11502.0 7 11714.0 8 11926.0 9 12632.0 10 13338.0 11 14141.0 12 14944.0 13 14527.5 14 14111.0 15 13624.0 16 13137.0 17 12677.0 18 12217.0 19 12164.0 20 12111.0 21 12640.0 22 13169.0 23 11964.5 24 10760.0 25 12866.0 26 19944.0 27 24916.0 28 29011.0 29 33106.0 30 40750.5 31 48395.0 32 54881.5 33 61368.0 34 72720.0 35 84072.0 36 90249.5 37 96427.0 38 108798.0 39 121169.0 40 167611.5 41 214054.0 42 261943.5 43 309833.0 44 315025.5 45 320218.0 46 288998.0 47 257778.0 48 237243.5 49 216709.0 50 199133.0 51 181557.0 52 164162.0 53 146767.0 54 127429.5 55 108092.0 56 101568.5 57 95045.0 58 91934.0 59 88823.0 60 86496.0 61 84169.0 62 77462.5 63 70756.0 64 62402.5 65 54049.0 66 44442.5 67 34836.0 68 29959.0 69 25082.0 70 23470.0 71 21858.0 72 18977.5 73 16097.0 74 13233.0 75 8293.5 76 6218.0 77 4493.0 78 2768.0 79 2167.0 80 1566.0 81 1065.0 82 564.0 83 477.0 84 390.0 85 245.5 86 101.0 87 122.5 88 144.0 89 86.5 90 29.0 91 19.0 92 9.0 93 9.0 94 9.0 95 9.0 96 9.0 97 4.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2919771.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.714480354570174 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94699704153605 13.195580311030639 2 7.681332216952342 2.5677895287435373 3 2.790696617882767 1.3993513138550078 4 1.4932038093827142 0.998325029491869 5 0.9282298486615832 0.7757439784989839 6 0.6401536989703356 0.6419901855207062 7 0.48020345576848716 0.5618445859347361 8 0.38094330838673596 0.5093815555388053 9 0.27819260690661535 0.41848603766345566 >10 3.6198372236153387 14.8172982619347 >50 1.478382961761054 17.79005805462802 >100 1.251090492509052 41.756503922705186 >500 0.026497170402547336 2.906893968239887 >1k 0.003815592537966816 0.9496902384659688 >5k 2.1197736322037868E-4 0.28277413047294797 >10k+ 2.1197736322037868E-4 0.42828889727565395 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12088 0.4140050709456324 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7981 0.27334335466719817 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4120 0.14110695667571188 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.025549948951475988 0.0 2 0.0 0.0 0.0 0.07668409611575702 0.0 3 0.0 0.0 0.0 0.11425553579373177 0.0 4 0.0 0.0 0.0 0.16874611056826033 0.0 5 3.4249261329056285E-5 0.0 0.0 0.324340504786163 0.0 6 3.4249261329056285E-5 0.0 0.0 0.4804143886626725 0.0 7 3.4249261329056285E-5 0.0 0.0 0.5971358712720963 0.0 8 3.4249261329056285E-5 0.0 0.0 0.8818157314392122 0.0 9 3.4249261329056285E-5 0.0 0.0 1.0112779392630449 0.0 10 3.4249261329056285E-5 0.0 0.0 1.2502007862945417 0.0 11 3.4249261329056285E-5 0.0 0.0 1.4313793787252493 0.0 12 3.4249261329056285E-5 0.0 0.0 1.6138936923477902 0.0 13 6.849852265811257E-5 0.0 0.0 1.6871528623306418 0.0 14 6.849852265811257E-5 0.0 0.0 1.7120863245781948 0.0 15 1.0274778398716886E-4 0.0 0.0 1.7538361741383142 0.0 16 1.0274778398716886E-4 0.0 0.0 1.8373358732585534 0.0 17 1.0274778398716886E-4 0.0 0.0 1.9378917045206627 0.0 18 1.0274778398716886E-4 0.0 0.0 2.101705921457539 0.0 19 1.0274778398716886E-4 0.0 0.0 2.169279714059767 0.0 20 1.0274778398716886E-4 0.0 0.0 2.2467172939247635 0.0 21 1.0274778398716886E-4 0.0 0.0 2.342683724168779 0.0 22 1.0274778398716886E-4 0.0 0.0 2.4490276805954987 0.0 23 1.0274778398716886E-4 0.0 0.0 2.5700303208710547 0.0 24 2.054955679743377E-4 0.0 0.0 2.6641815402646305 0.0 25 2.054955679743377E-4 0.0 0.0 2.7389819270072895 0.0 26 2.054955679743377E-4 0.0 0.0 2.8171044920988666 0.0 27 2.39744829303394E-4 0.0 0.0 2.8932406000333586 0.0 28 2.739940906324503E-4 0.0 0.0 2.977356785857521 0.0 29 3.082433519615066E-4 0.0 0.0 3.0719874949097035 0.0 30 3.082433519615066E-4 0.0 0.0 3.1997029904057546 0.0 31 3.082433519615066E-4 0.0 0.0 3.3127940513142984 0.0 32 3.082433519615066E-4 0.0 0.0 3.411671668771284 0.0 33 3.082433519615066E-4 0.0 0.0 3.518734859685914 0.0 34 3.082433519615066E-4 0.0 0.0 3.6288119855975007 0.0 35 3.082433519615066E-4 0.0 0.0 3.776494800448391 0.0 36 3.082433519615066E-4 0.0 0.0 3.892976538228512 0.0 37 3.082433519615066E-4 0.0 0.0 4.013499688845461 0.0 38 3.082433519615066E-4 0.0 0.0 4.12857720691109 0.0 39 3.082433519615066E-4 0.0 0.0 4.257936666950935 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 35 1.212793E-7 45.0 1 ATAGCGC 25 3.892288E-5 45.0 36 CTACGTC 20 7.0350745E-4 45.0 32 TCGTAAT 20 7.0350745E-4 45.0 36 ATACGTA 40 6.8212103E-9 45.0 44 CAATCGA 25 3.892288E-5 45.0 29 TATAGCG 200 0.0 42.75 1 CGGGATC 350 0.0 41.785713 6 TACGGGA 475 0.0 41.684208 4 CTAAGCG 65 0.0 41.538464 1 AATACGG 250 0.0 40.500004 2 ACCCGCT 1185 0.0 40.44304 34 CGGGTAC 180 0.0 40.0 6 CGTACTC 45 1.9301297E-8 40.0 28 ATAGGGC 1280 0.0 39.55078 4 AATCGTC 40 3.4606637E-7 39.375 20 TTACGAG 195 0.0 39.23077 1 AATGCGG 305 0.0 39.098362 2 GGGCGAT 4450 0.0 39.03371 7 TAGAACG 75 0.0 39.000004 1 >>END_MODULE