##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545208_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3570194 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.223135493477386 31.0 31.0 33.0 30.0 34.0 2 31.479117381296366 31.0 31.0 34.0 30.0 34.0 3 31.563499910649114 31.0 31.0 34.0 30.0 34.0 4 35.32981344991337 37.0 35.0 37.0 33.0 37.0 5 35.17199457508472 37.0 35.0 37.0 32.0 37.0 6 35.158982397035004 37.0 35.0 37.0 32.0 37.0 7 35.82118674783499 37.0 35.0 37.0 35.0 37.0 8 35.9183450535181 37.0 35.0 37.0 35.0 37.0 9 37.54966732900229 39.0 37.0 39.0 35.0 39.0 10 36.77945848320847 39.0 37.0 39.0 32.0 39.0 11 36.43118357153701 38.0 35.0 39.0 32.0 39.0 12 35.448546773648715 37.0 35.0 39.0 30.0 39.0 13 35.001485353456985 37.0 34.0 39.0 29.0 39.0 14 35.77386999137862 38.0 34.0 40.0 28.0 41.0 15 36.23288286294807 38.0 35.0 40.0 30.0 41.0 16 36.15970784780883 38.0 35.0 40.0 31.0 41.0 17 36.253396874231484 37.0 35.0 40.0 31.0 41.0 18 36.32753374186389 37.0 35.0 40.0 31.0 41.0 19 36.23627399519466 37.0 35.0 40.0 31.0 41.0 20 36.08462481310539 36.0 34.0 40.0 31.0 41.0 21 35.93793978702558 36.0 34.0 40.0 30.0 41.0 22 35.82122007935703 36.0 34.0 40.0 30.0 41.0 23 35.775502395668134 36.0 34.0 40.0 30.0 41.0 24 35.60452401186042 36.0 34.0 40.0 30.0 41.0 25 35.56855201706126 36.0 34.0 40.0 30.0 41.0 26 35.423534127277115 36.0 34.0 40.0 29.0 41.0 27 35.36031599403282 36.0 34.0 40.0 29.0 41.0 28 35.39856125465451 36.0 34.0 40.0 29.0 41.0 29 35.40834055516311 36.0 34.0 40.0 29.0 41.0 30 35.309751514903674 36.0 34.0 40.0 29.0 41.0 31 35.18555154145685 36.0 34.0 40.0 29.0 41.0 32 35.0434365751553 35.0 34.0 40.0 29.0 41.0 33 34.85781584978295 35.0 34.0 40.0 27.0 41.0 34 34.710558025698326 35.0 34.0 40.0 27.0 41.0 35 34.533944934084815 35.0 33.0 40.0 26.0 41.0 36 34.29265132370958 35.0 33.0 40.0 24.0 41.0 37 34.10935568207218 35.0 33.0 40.0 24.0 41.0 38 34.17454233579464 35.0 33.0 40.0 24.0 41.0 39 34.17085458101156 35.0 33.0 40.0 24.0 41.0 40 34.00241583510588 35.0 33.0 40.0 23.0 41.0 41 34.02138259153424 35.0 33.0 40.0 23.0 41.0 42 33.93626228714742 35.0 33.0 40.0 23.0 41.0 43 33.810410582730235 35.0 33.0 39.0 23.0 41.0 44 33.781016661839665 35.0 33.0 39.0 23.0 41.0 45 33.69367154838084 35.0 33.0 39.0 23.0 41.0 46 33.61151718926198 35.0 33.0 39.0 23.0 41.0 47 33.639438921246295 35.0 33.0 39.0 23.0 41.0 48 33.60260926997245 35.0 33.0 39.0 23.0 41.0 49 33.586508464245924 35.0 33.0 39.0 24.0 41.0 50 33.359074044715776 35.0 32.0 39.0 23.0 40.0 51 33.16573497126487 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 4.0 12 11.0 13 15.0 14 22.0 15 117.0 16 360.0 17 976.0 18 2238.0 19 4297.0 20 7429.0 21 11983.0 22 17795.0 23 25040.0 24 35246.0 25 47430.0 26 61998.0 27 73306.0 28 83294.0 29 96693.0 30 115442.0 31 140842.0 32 174623.0 33 228293.0 34 379849.0 35 549734.0 36 253133.0 37 296669.0 38 397679.0 39 565220.0 40 455.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.018821946370416 24.166669934462945 28.33719960315882 14.477308516007813 2 32.00100610779134 26.297254434913057 29.004138150475857 12.697601306819742 3 28.100965941906797 26.747790176108076 31.64505906401725 13.506184817967876 4 26.42579086738704 28.258828511839972 30.895547973023312 14.419832647749676 5 23.526144517636858 32.895383276090875 29.291293414307457 14.287178791964806 6 20.747051840880356 41.8614786759487 26.737174506483402 10.654294976687542 7 86.09759021498552 5.468666408604126 6.738849485490145 1.6948938909202134 8 87.66181893757033 4.240693923075329 6.4012487836795415 1.6962383556747895 9 83.556103673918 5.726355486564596 7.932566129459631 2.7849747100577726 10 52.849481008595056 23.19086861946438 13.442294732443111 10.517355639497461 11 46.811293728015904 21.01488042386492 19.144057717871917 13.029768130247263 12 41.66389837639075 22.110731237574203 23.403462108781763 12.82190827725328 13 20.655124063286195 42.39080565369837 23.150982831745278 13.803087451270155 14 14.374428952600335 44.5081975937442 26.31069908245882 14.806674371196635 15 14.222672493427527 24.131769870208732 47.90168265365972 13.743874982704021 16 15.640298538398753 19.097001451461743 46.50027421479057 18.762425795348936 17 15.382049266790542 19.292172918334412 29.181607498079938 36.14417031679511 18 19.57148547109765 23.94326470774417 37.09703170191872 19.388218119239458 19 31.062905825285686 23.521775007184484 25.54830353756687 19.867015629962967 20 32.514143489121324 22.886683468741474 25.55919930401541 19.039973738121795 21 21.4241018835391 30.85294524611268 27.777762216843115 19.945190653505104 22 21.38656890914051 25.41018779371653 23.57616981038005 29.627073486762907 23 18.59235100389503 31.83709344646257 25.312826137739293 24.257729411903107 24 17.23603815366896 24.416964456273245 42.054157281088926 16.292840108968868 25 17.053050898634638 25.902093835797157 38.331978598361886 18.71287666720632 26 15.927285744136032 36.645067466921965 26.860641186445335 20.56700560249667 27 16.681894597324405 38.59157233472467 27.767510673089475 16.959022394861456 28 15.200686573334671 30.579178610462066 37.9492823079082 16.270852508295068 29 16.29368039944048 26.04499923533567 35.70531461315547 21.956005752068375 30 17.90283665257406 35.08604854526113 28.97948962997529 18.03162517218952 31 30.337959225745152 29.201858498445745 23.65246818520226 16.80771409060684 32 31.97582540332542 25.43214738470795 26.162611891678715 16.42941532028792 33 30.198723094599337 27.639030259980267 23.039336237750664 19.122910407669725 34 20.123920436816597 27.95229054779656 25.72599696263004 26.197792052756796 35 21.486675513991678 25.396883194582703 31.33011819525774 21.786323096167884 36 32.13027079200738 27.412095813280736 23.268455439676387 17.189177955035497 37 20.287665040051046 37.287637590562305 26.555727783980366 15.868969585406283 38 19.99034226151296 36.90922678151383 23.29416832810766 19.806262628865547 39 21.267387710583794 35.20909507998725 25.020965247266673 18.50255196216228 40 25.630595984419895 25.441334560530883 26.399349727213707 22.52871972783552 41 17.341662665950366 25.491443882321242 27.151045573433823 30.015847878294572 42 19.239402676717287 26.34377851735788 25.124012868768475 29.29280593715636 43 20.120279178106287 25.536791558105804 27.2668656101041 27.076063653683807 44 18.044453606722772 30.32017307742941 30.43072729381092 21.204646022036897 45 17.113775890049673 40.43931506243078 22.972729213034363 19.474179834485184 46 20.652042998223628 36.76057939708598 24.363073827360644 18.224303777329748 47 20.9664236733354 29.01074843551919 25.59468757159975 24.428140319545662 48 20.603950373565134 27.31504226380975 32.410367615877455 19.670639746747657 49 21.541742549564532 26.66950311383639 33.37981073297417 18.4089436036249 50 19.779625420915504 36.63845718187863 25.247871684283822 18.33404571292204 51 18.37440766524172 35.02720020256602 25.205100899278865 21.393291232913395 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 13093.0 1 12240.5 2 11388.0 3 21777.0 4 32166.0 5 23359.0 6 14552.0 7 14849.0 8 15146.0 9 16361.0 10 17576.0 11 18630.0 12 19684.0 13 19384.5 14 19085.0 15 19001.5 16 18918.0 17 17697.5 18 16477.0 19 15738.5 20 15000.0 21 14114.0 22 13228.0 23 15462.0 24 17696.0 25 21411.5 26 29316.0 27 33505.0 28 39007.5 29 44510.0 30 58800.0 31 73090.0 32 83234.0 33 93378.0 34 94483.0 35 95588.0 36 108848.5 37 122109.0 38 140250.0 39 158391.0 40 216832.5 41 275274.0 42 326306.0 43 377338.0 44 378293.0 45 379248.0 46 348712.5 47 318177.0 48 290994.5 49 263812.0 50 233663.0 51 203514.0 52 186448.0 53 169382.0 54 150615.5 55 131849.0 56 125097.5 57 118346.0 58 112588.0 59 106830.0 60 98855.0 61 90880.0 62 84141.5 63 77403.0 64 66992.0 65 56581.0 66 47796.0 67 39011.0 68 34118.5 69 29226.0 70 26133.5 71 23041.0 72 20023.0 73 17005.0 74 14063.0 75 8580.5 76 6040.0 77 4595.5 78 3151.0 79 2426.0 80 1701.0 81 1204.5 82 708.0 83 566.0 84 424.0 85 339.5 86 255.0 87 149.0 88 43.0 89 80.0 90 117.0 91 63.5 92 10.0 93 5.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3570194.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.725473321999345 #Duplication Level Percentage of deduplicated Percentage of total 1 78.76056346744085 12.385471396328775 2 8.203225929858258 2.5799922102863864 3 2.926414304702535 1.3805775023315094 4 1.5653041274061312 0.9846059318536233 5 0.9971132198824453 0.784003866913713 6 0.688164421983364 0.6493026755429095 7 0.518389206435658 0.5706340945351446 8 0.3828088746566119 0.4815880596669713 9 0.3305307173366307 0.46779767798206434 >10 3.022720980651181 11.011564110246788 >50 1.1417033126424454 13.166784383513292 >100 1.3969521113141705 46.56389923939969 >500 0.05708604725282966 5.795439419237864 >1k 0.00847083281816182 2.1353798400777495 >5k 1.8414853952525696E-4 0.15000362858153976 >10k+ 3.682970790505139E-4 0.892955963502 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19127 0.5357411950162932 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 11709 0.3279653710694713 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5180 0.14509015476469905 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4667 0.1307211877001642 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4167 0.11671634650666043 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01366872500485968 0.0 2 0.0 0.0 0.0 0.05338645462963637 0.0 3 0.0 0.0 0.0 0.08862263507249186 0.0 4 0.0 0.0 0.0 0.12828434533249453 0.0 5 0.0 0.0 0.0 0.2481937956312738 0.0 6 0.0 0.0 0.0 0.37446144383190383 0.0 7 0.0 0.0 0.0 0.46524082444819526 0.0 8 0.0 0.0 0.0 0.6681709733420649 0.0 9 0.0 0.0 0.0 0.7729551951518601 0.0 10 0.0 0.0 0.0 0.9549901209850221 0.0 11 0.0 0.0 0.0 1.1504136749991738 0.0 12 0.0 0.0 0.0 1.3152226461643262 0.0 13 0.0 0.0 0.0 1.3807092835851498 0.0 14 0.0 0.0 0.0 1.4056098912271995 0.0 15 0.0 0.0 0.0 1.4433949527672727 0.0 16 0.0 0.0 0.0 1.5274520096106823 0.0 17 0.0 0.0 0.0 1.6254858979652087 0.0 18 2.8009682387007542E-5 0.0 0.0 1.779371092999428 0.0 19 2.8009682387007542E-5 0.0 0.0 1.8455019531151529 0.0 20 2.8009682387007542E-5 0.0 0.0 1.916926643202022 0.0 21 2.8009682387007542E-5 0.0 0.0 2.0063335493813503 0.0 22 2.8009682387007542E-5 0.0 0.0 2.1033310794875573 0.0 23 2.8009682387007542E-5 0.0 0.0 2.221531939160729 0.0 24 5.6019364774015084E-5 0.0 0.0 2.313263648978179 0.0 25 5.6019364774015084E-5 0.0 0.0 2.3869291136560085 0.0 26 5.6019364774015084E-5 0.0 0.0 2.4576535616832027 0.0 27 5.6019364774015084E-5 0.0 0.0 2.529106261452459 0.0 28 5.6019364774015084E-5 0.0 0.0 2.6056287137337635 0.0 29 5.6019364774015084E-5 0.0 0.0 2.692570767863035 0.0 30 8.402904716102262E-5 0.0 0.0 2.8129003633976195 0.0 31 1.1203872954803017E-4 0.0 0.0 2.922558269942754 0.0 32 1.6805809432204525E-4 0.0 0.0 3.0203960905205713 0.0 33 1.6805809432204525E-4 0.0 0.0 3.1226034215507616 0.0 34 1.6805809432204525E-4 0.0 0.0 3.2210574551410933 0.0 35 1.6805809432204525E-4 0.0 0.0 3.361750089771032 0.0 36 1.6805809432204525E-4 0.0 0.0 3.476701826287311 0.0 37 2.2407745909606034E-4 0.0 0.0 3.5863037134676716 0.0 38 2.2407745909606034E-4 0.0 0.0 3.6927405065383003 0.0 39 2.5208714148306784E-4 0.0 0.0 3.807244088136387 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 55 1.8189894E-12 45.0 1 TATACGA 55 1.8189894E-12 45.0 1 TTCGCAT 25 3.8924634E-5 45.0 1 CGACGGT 340 0.0 43.014706 28 CTCGCTA 75 0.0 42.0 14 GTATGCG 215 0.0 41.860466 1 TAATACG 70 0.0 41.785713 1 TCTAGCG 135 0.0 41.666668 1 TACGGGA 720 0.0 41.562504 4 CAACCGT 65 0.0 41.53846 28 AGTACGG 245 0.0 41.32653 2 ACGTATA 60 3.6379788E-12 41.249996 13 TCGTAAG 285 0.0 41.05263 1 ATGGGAC 1665 0.0 40.81081 5 CGTAAGG 580 0.0 40.732758 2 AGGGATC 2020 0.0 40.65594 6 CGGTCTA 385 0.0 40.324677 31 GCGTTAG 280 0.0 40.17857 1 TAACGCA 45 1.9303116E-8 40.000004 25 CGTAGGT 45 1.9303116E-8 40.000004 24 >>END_MODULE