##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545207_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 439106 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.119845777557128 31.0 31.0 33.0 28.0 34.0 2 31.392155880356906 31.0 31.0 34.0 30.0 34.0 3 31.475434177624535 31.0 31.0 34.0 30.0 34.0 4 35.26637531712161 37.0 35.0 37.0 33.0 37.0 5 35.13243954762631 37.0 35.0 37.0 32.0 37.0 6 35.11568505098997 37.0 35.0 37.0 32.0 37.0 7 35.77444398391277 37.0 35.0 37.0 35.0 37.0 8 35.863306354274364 37.0 35.0 37.0 35.0 37.0 9 37.48087933209749 39.0 37.0 39.0 35.0 39.0 10 36.664472815220016 39.0 35.0 39.0 32.0 39.0 11 36.36880161054506 38.0 35.0 39.0 32.0 39.0 12 35.7060094829039 37.0 35.0 39.0 31.0 39.0 13 35.411000988371825 37.0 35.0 39.0 30.0 39.0 14 36.24074369286687 38.0 35.0 40.0 30.0 41.0 15 36.574674452182386 38.0 35.0 40.0 31.0 41.0 16 36.446195223932264 38.0 35.0 40.0 31.0 41.0 17 36.48659776910359 38.0 35.0 40.0 31.0 41.0 18 36.49277167699827 38.0 35.0 40.0 31.0 41.0 19 36.41731381488752 38.0 35.0 40.0 31.0 41.0 20 36.31440699967661 38.0 35.0 40.0 31.0 41.0 21 36.187521919536515 38.0 34.0 40.0 30.0 41.0 22 36.09520935719394 38.0 34.0 40.0 30.0 41.0 23 36.01551561581942 37.0 34.0 40.0 30.0 41.0 24 35.81359170678606 37.0 34.0 40.0 30.0 41.0 25 35.76969114519046 37.0 34.0 40.0 30.0 41.0 26 35.615083829417046 37.0 34.0 40.0 29.0 41.0 27 35.59001698906415 37.0 34.0 40.0 29.0 41.0 28 35.5735972635309 37.0 34.0 40.0 29.0 41.0 29 35.531286295336436 37.0 34.0 40.0 29.0 41.0 30 35.40517323835247 37.0 34.0 40.0 29.0 41.0 31 35.280572344718585 37.0 34.0 40.0 28.0 41.0 32 35.14841974375208 37.0 34.0 40.0 27.0 41.0 33 34.96093198453221 37.0 34.0 40.0 27.0 41.0 34 34.76852058500681 37.0 34.0 40.0 25.0 41.0 35 34.58342404795197 36.0 33.0 40.0 25.0 41.0 36 34.41664199532687 36.0 33.0 40.0 24.0 41.0 37 34.21929784607817 36.0 33.0 40.0 23.0 41.0 38 34.243244228045164 36.0 33.0 40.0 24.0 41.0 39 34.22868282373732 36.0 33.0 40.0 23.0 41.0 40 34.09532322491608 36.0 33.0 40.0 23.0 41.0 41 34.04155716387387 36.0 33.0 40.0 23.0 41.0 42 33.972835716205196 35.0 33.0 40.0 23.0 41.0 43 33.829262182707595 35.0 33.0 40.0 23.0 41.0 44 33.74673085769723 35.0 33.0 40.0 23.0 41.0 45 33.67404681329793 35.0 33.0 40.0 23.0 41.0 46 33.582626973896964 35.0 32.0 39.0 23.0 41.0 47 33.58861186137288 35.0 32.0 39.0 23.0 41.0 48 33.55784935755831 35.0 32.0 39.0 23.0 41.0 49 33.517444535032546 35.0 32.0 39.0 23.0 41.0 50 33.33310407965275 35.0 32.0 39.0 23.0 41.0 51 33.16505126324851 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 5.0 14 8.0 15 18.0 16 42.0 17 135.0 18 299.0 19 603.0 20 1011.0 21 1540.0 22 2317.0 23 3419.0 24 4605.0 25 6384.0 26 8007.0 27 9324.0 28 10450.0 29 11797.0 30 13926.0 31 17171.0 32 20793.0 33 26211.0 34 41316.0 35 54325.0 36 34566.0 37 41766.0 38 55645.0 39 73386.0 40 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.26961599249384 23.400955577924236 25.96411800339781 15.365310426184111 2 33.88771731654771 25.021065528596743 28.063838799743113 13.027378355112432 3 28.48719899067651 26.22578602888596 31.749509230117557 13.537505750319967 4 26.136058263836066 27.993013076569213 30.761137401902953 15.109791257691766 5 22.6635482093162 32.6451927325065 29.531593738186224 15.159665319991072 6 20.95940387970103 40.790606368393966 28.24921545139442 10.000774300510583 7 85.58070260939272 4.848487608914477 7.700874048635181 1.8699357330576216 8 86.69956684718497 4.0145204119278715 7.550113184515812 1.7357995563713546 9 82.39217865390134 5.404162092979827 9.042008080053563 3.161651173065273 10 46.500844898498315 25.511607675595414 15.987028189093294 12.000519236812979 11 38.56130410424818 23.8792000109313 22.65694388143182 14.902552003388703 12 34.766548396059264 23.057302792492017 26.983917322924306 15.19223148852441 13 21.95233041680141 35.25071395061784 26.60473780818299 16.192217824397755 14 17.36163933082217 36.938916799132784 29.90280251237742 15.796641357667623 15 16.58597240757357 24.560128989355647 42.63253064180403 16.221367961266754 16 18.764945138531473 20.99811890523017 40.87555168911379 19.361384267124567 17 18.79728357162052 20.908618875624565 30.477379038318762 29.816718514436154 18 21.439697931706693 23.857337408279548 35.053267320419216 19.64969733959454 19 29.02078313664582 24.975973910627502 26.83748343224643 19.16575952048025 20 30.29245785755603 24.313036032301998 27.243080258525275 18.151425851616693 21 23.41985761980023 28.227808319631254 28.789631660692404 19.562702399876112 22 22.187808866196317 25.02630344381539 26.32621735981745 26.459670330170848 23 20.03775853666313 29.570991970048233 27.431189735508056 22.96005975778058 24 19.80319102904538 24.560356724799934 37.41442840680838 18.222023839346306 25 19.897473502981057 26.6546118704823 33.795939932499216 19.65197469403743 26 18.710288631902092 32.75951592553962 27.70401679776637 20.826178644791916 27 18.501227494044716 32.76224875087109 28.990266587111087 19.74625716797311 28 17.87632143491549 28.803978993682616 34.60918320405551 18.71051636734638 29 18.527644805582252 25.759383838981933 34.6178371509385 21.09513420449732 30 20.780631555934104 29.866137105846878 30.939226519337016 18.414004818882002 31 27.831776382012546 27.5136299663407 26.46855201249812 18.186041639148634 32 29.467372342896702 25.58972093298657 26.635254357717724 18.307652366399 33 28.06998765673892 27.034930062445056 24.947962450979947 19.947119829836076 34 20.691814732661364 27.042445332106595 27.648904820248415 24.616835114983626 35 20.96851329747259 27.12329141482922 30.7937035704363 21.114491717261892 36 28.515665921212648 27.794200033704847 24.9864497410648 18.70368430401771 37 21.30009610435749 33.872459041780346 26.70539687455876 18.122047979303403 38 20.99151457734579 33.67136864447309 25.29730862251939 20.03980815566173 39 20.75193688995368 32.56730721055964 25.9456714324104 20.735084467076287 40 24.826807194618155 25.8308927684887 27.59789208072766 21.74440795616548 41 18.759251752424245 26.06955951410366 28.088661963170626 27.082526770301474 42 20.656743474240844 27.496549808019022 25.244929470332906 26.60177724740723 43 20.725064107527565 26.80742235360027 27.428912381065164 25.038601157807 44 19.981963352812304 28.84929834709615 30.322746671646485 20.845991628445066 45 18.91115129376506 35.351828487882194 25.0782271251133 20.658793093239446 46 21.13977035157798 33.07629592854573 26.04382540889899 19.740108310977302 47 20.576808333295375 29.47830364422258 27.157223996028296 22.78766402645375 48 20.809098486470237 27.25241741174113 30.99228887785637 20.946195223932264 49 20.94642295937655 27.621348831489435 31.542497711258783 19.889730497875227 50 19.781328426393628 33.82235724403675 26.991888063474423 19.404426266095204 51 18.77519323352448 32.84218389181655 26.900338414870212 21.482284459788755 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1525.0 1 1338.5 2 1152.0 3 2985.0 4 4818.0 5 3446.0 6 2074.0 7 2066.5 8 2059.0 9 2229.5 10 2400.0 11 2442.5 12 2485.0 13 2465.0 14 2445.0 15 2388.0 16 2331.0 17 2363.0 18 2395.0 19 2322.0 20 2249.0 21 2301.0 22 2353.0 23 2451.0 24 2549.0 25 2733.5 26 3682.5 27 4447.0 28 5176.0 29 5905.0 30 7229.5 31 8554.0 32 9406.5 33 10259.0 34 12716.5 35 15174.0 36 16299.5 37 17425.0 38 19688.0 39 21951.0 40 26058.0 41 30165.0 42 34526.0 43 38887.0 44 38102.5 45 37318.0 46 35217.5 47 33117.0 48 30619.0 49 28121.0 50 26711.5 51 25302.0 52 23289.5 53 21277.0 54 19328.0 55 17379.0 56 17043.5 57 16708.0 58 16381.5 59 16055.0 60 15188.5 61 14322.0 62 12887.5 63 11453.0 64 10334.0 65 9215.0 66 8020.5 67 6826.0 68 5874.5 69 4923.0 70 4419.0 71 3915.0 72 3338.5 73 2762.0 74 2301.5 75 1430.5 76 1020.0 77 809.0 78 598.0 79 404.0 80 210.0 81 172.0 82 134.0 83 102.0 84 70.0 85 39.5 86 9.0 87 7.0 88 5.0 89 3.5 90 2.0 91 1.5 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 439106.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.677280627700448 #Duplication Level Percentage of deduplicated Percentage of total 1 70.84101977448347 22.440508633487898 2 7.099827361671338 4.498064474877781 3 3.7648342674750044 3.577791348227663 4 2.6443159575676383 3.3505895462470603 5 2.100568820756187 3.327015400644578 6 1.6921386302930521 3.216141015165941 7 1.4713377860339933 3.26255859624368 8 1.2699687840720768 3.2183326049176566 9 1.0707202163628173 3.05257542907294 >10 7.923744089207639 46.064796128847426 >50 0.10488705506627599 2.13238112560393 >100 0.014467180009141515 0.7671622618226905 >500 7.233590004570757E-4 0.1274020960494074 >1k 0.0014467180009141514 0.9646813387913761 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2824 0.643124894672357 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1386 0.3156413257846625 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 556 0.1266209070247275 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014802803878790087 0.0 2 0.0 0.0 0.0 0.04987406229930814 0.0 3 0.0 0.0 0.0 0.07538043205968491 0.0 4 0.0 0.0 0.0 0.10566924615013232 0.0 5 0.0 0.0 0.0 0.18605985798417693 0.0 6 0.0 0.0 0.0 0.2949174003543564 0.0 7 0.0 0.0 0.0 0.38396195907138597 0.0 8 0.0 0.0 0.0 0.5745765259413445 0.0 9 0.0 0.0 0.0 0.6622546719926395 0.0 10 0.0 0.0 0.0 0.7758946586928896 0.0 11 2.2773544428907825E-4 0.0 0.0 0.8706326035171462 0.0 12 2.2773544428907825E-4 0.0 0.0 0.9594494267898868 0.0 13 2.2773544428907825E-4 0.0 0.0 1.0002140713176317 0.0 14 2.2773544428907825E-4 0.0 0.0 1.021165732192227 0.0 15 2.2773544428907825E-4 0.0 0.0 1.0407509804010877 0.0 16 2.2773544428907825E-4 0.0 0.0 1.0860703338146143 0.0 17 2.2773544428907825E-4 0.0 0.0 1.138221750556813 0.0 18 2.2773544428907825E-4 0.0 0.0 1.2236225421652176 0.0 19 2.2773544428907825E-4 0.0 0.0 1.2602879486957592 0.0 20 2.2773544428907825E-4 0.0 0.0 1.304013153999262 0.0 21 2.2773544428907825E-4 0.0 0.0 1.355709099852883 0.0 22 2.2773544428907825E-4 0.0 0.0 1.4160589925894886 0.0 23 2.2773544428907825E-4 0.0 0.0 1.4907562183163063 0.0 24 4.554708885781565E-4 0.0 0.0 1.550878375608623 0.0 25 4.554708885781565E-4 0.0 0.0 1.5991582897979075 0.0 26 4.554708885781565E-4 0.0 0.0 1.641061611547098 0.0 27 4.554708885781565E-4 0.0 0.0 1.6859254940720463 0.0 28 4.554708885781565E-4 0.0 0.0 1.7433148260328941 0.0 29 4.554708885781565E-4 0.0 0.0 1.8143682846510865 0.0 30 4.554708885781565E-4 0.0 0.0 1.9070566104767415 0.0 31 4.554708885781565E-4 0.0 0.0 1.9762881855406211 0.0 32 4.554708885781565E-4 0.0 0.0 2.045519760604501 0.0 33 4.554708885781565E-4 0.0 0.0 2.11247398122549 0.0 34 4.554708885781565E-4 0.0 0.0 2.1878544132851747 0.0 35 4.554708885781565E-4 0.0 0.0 2.2823646226651424 0.0 36 6.832063328672348E-4 0.0 0.0 2.365260324386367 0.0 37 6.832063328672348E-4 0.0 0.0 2.447472819774724 0.0 38 6.832063328672348E-4 0.0 0.0 2.545854531707606 0.0 39 6.832063328672348E-4 0.0 0.0 2.6722477032880443 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTA 20 7.0285203E-4 45.0 5 ATCGTAA 25 3.8868544E-5 45.0 14 AGTGCGT 20 7.0285203E-4 45.0 24 AAGCACG 25 3.8868544E-5 45.0 1 GTCGTTT 25 3.8868544E-5 45.0 9 GCGATAT 40 6.7993824E-9 45.0 9 CGTACAT 25 3.8868544E-5 45.0 35 GTGCGAG 35 1.209628E-7 45.0 1 TGCGTAT 20 7.0285203E-4 45.0 26 TGCGTAG 25 3.8868544E-5 45.0 1 TACGGGA 110 0.0 42.954544 4 ATTGCGG 70 0.0 41.785713 2 CGTTTTT 1965 0.0 41.33588 1 GACCGAT 120 0.0 41.249996 9 TGGGCGA 205 0.0 40.609756 6 CACGGGA 100 0.0 40.5 4 ACGGGCT 150 0.0 40.5 5 CACCCAT 140 0.0 40.17857 31 TCGTCCC 185 0.0 40.135136 38 ACGCTAG 45 1.9235813E-8 40.0 1 >>END_MODULE