SRR1545206_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545206_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	466633
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1817	0.3893852342204687	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1442	0.30902229375119206	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	638	0.13672414938506278	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	619	0.13265242706795274	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	605	0.12965221062376645	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	20	7.0289726E-4	45.000004	12
ACGTTAG	20	7.0289726E-4	45.000004	1
CGTTGAT	115	0.0	45.000004	25
TACGGGA	65	0.0	45.000004	4
TCGATAA	20	7.0289726E-4	45.000004	16
TCGGATT	20	7.0289726E-4	45.000004	14
GTTCGAC	20	7.0289726E-4	45.000004	13
GGAACGA	20	7.0289726E-4	45.000004	8
ACGTATA	40	6.7993824E-9	45.000004	13
CGCCGCA	20	7.0289726E-4	45.000004	18
AGTACGG	65	0.0	45.000004	2
ATCGCCA	20	7.0289726E-4	45.000004	24
TACACGT	20	7.0289726E-4	45.000004	1
CGACGGT	55	1.8189894E-12	45.0	28
TAGCGAG	50	2.1827873E-11	45.0	1
CGACAGG	55	1.8189894E-12	45.0	2
TCGATGG	35	1.2098462E-7	45.0	2
GCGTTAG	35	1.2098462E-7	45.0	1
ACGGGAA	25	3.887231E-5	45.0	5
TGCGAAG	35	1.2098462E-7	45.0	1