SRR1545205_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545205_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	130427
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	629	0.4822621083057955	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	524	0.4017573048525229	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	264	0.2024120772539428	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	171	0.13110782276675842	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAGAC	20	7.010276E-4	45.000004	21
TATCAGG	20	7.010276E-4	45.000004	2
GGAATTA	20	7.010276E-4	45.000004	8
CGAAAAA	20	7.010276E-4	45.000004	22
TGTATAG	20	7.010276E-4	45.000004	1
TACGGGA	40	6.7357178E-9	45.000004	4
CCAGAAA	40	6.7357178E-9	45.000004	3
GTTACGG	40	6.7357178E-9	45.000004	2
AACGGGA	20	7.010276E-4	45.000004	4
CTACGAA	20	7.010276E-4	45.000004	11
TACGAAA	20	7.010276E-4	45.000004	20
GATATAG	20	7.010276E-4	45.000004	1
CATACGA	20	7.010276E-4	45.000004	18
TGCTATG	20	7.010276E-4	45.000004	1
CGAGACA	20	7.010276E-4	45.000004	22
GCTACGA	20	7.010276E-4	45.000004	10
TAGTGAG	20	7.010276E-4	45.000004	1
TACAGCG	20	7.010276E-4	45.000004	1
ACATACG	20	7.010276E-4	45.000004	17
CCCATTA	20	7.010276E-4	45.000004	33