##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545203_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1916586 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.229056770737134 31.0 31.0 33.0 30.0 34.0 2 31.485927581647783 31.0 31.0 34.0 30.0 34.0 3 31.568636627837208 31.0 31.0 34.0 30.0 34.0 4 35.32002738202199 37.0 35.0 37.0 33.0 37.0 5 35.1758668799626 37.0 35.0 37.0 32.0 37.0 6 35.16664057861218 37.0 35.0 37.0 32.0 37.0 7 35.82053766436779 37.0 35.0 37.0 35.0 37.0 8 35.93572738191764 37.0 35.0 37.0 35.0 37.0 9 37.60622638378867 39.0 37.0 39.0 35.0 39.0 10 36.83101201824494 39.0 37.0 39.0 32.0 39.0 11 36.43111762268951 38.0 35.0 39.0 32.0 39.0 12 35.22742470204833 37.0 35.0 39.0 30.0 39.0 13 34.64197327957107 35.0 33.0 39.0 27.0 39.0 14 35.401158100914856 37.0 33.0 40.0 27.0 41.0 15 35.94657218616853 37.0 34.0 40.0 30.0 41.0 16 35.93484351863157 36.0 34.0 40.0 31.0 41.0 17 36.01736212202322 36.0 34.0 40.0 31.0 41.0 18 36.10068215044877 36.0 35.0 40.0 31.0 41.0 19 35.996930479508876 36.0 35.0 40.0 31.0 41.0 20 35.826028156315445 36.0 34.0 40.0 31.0 41.0 21 35.65639475609235 35.0 34.0 40.0 30.0 41.0 22 35.532211964399195 35.0 34.0 40.0 30.0 41.0 23 35.502580108588916 35.0 34.0 40.0 30.0 41.0 24 35.34629440056434 35.0 34.0 40.0 30.0 41.0 25 35.308853868284544 35.0 34.0 40.0 30.0 41.0 26 35.15487434427675 35.0 34.0 40.0 29.0 41.0 27 35.106592660073694 35.0 34.0 40.0 29.0 41.0 28 35.18734823274301 36.0 34.0 40.0 29.0 41.0 29 35.20946359829405 36.0 34.0 40.0 29.0 41.0 30 35.127307097098694 36.0 34.0 40.0 29.0 41.0 31 34.9497669293212 35.0 34.0 40.0 29.0 41.0 32 34.78201656487108 35.0 34.0 40.0 29.0 41.0 33 34.59635675101457 35.0 33.0 40.0 27.0 41.0 34 34.44852774673299 35.0 34.0 40.0 27.0 41.0 35 34.26138717490371 35.0 33.0 40.0 25.0 41.0 36 34.00777163143214 35.0 33.0 39.0 24.0 41.0 37 33.81064820467227 35.0 33.0 39.0 23.0 41.0 38 33.910681284325356 35.0 33.0 39.0 24.0 41.0 39 33.927950532874604 35.0 33.0 39.0 24.0 41.0 40 33.74677734262903 35.0 33.0 39.0 23.0 41.0 41 33.78675311204402 35.0 33.0 39.0 23.0 41.0 42 33.715449241515905 35.0 33.0 39.0 23.0 41.0 43 33.584042667534874 35.0 33.0 39.0 23.0 41.0 44 33.548839446808024 35.0 33.0 39.0 23.0 41.0 45 33.47687085265154 35.0 33.0 39.0 23.0 41.0 46 33.44307795215033 35.0 33.0 39.0 23.0 41.0 47 33.43736571173952 35.0 33.0 39.0 23.0 41.0 48 33.457631434227316 35.0 33.0 38.0 23.0 41.0 49 33.45398745477636 35.0 33.0 38.0 24.0 40.0 50 33.209981185295106 35.0 32.0 38.0 24.0 40.0 51 33.02084800786398 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 3.0 13 6.0 14 15.0 15 73.0 16 216.0 17 571.0 18 1241.0 19 2296.0 20 4142.0 21 6520.0 22 9838.0 23 14072.0 24 19275.0 25 26460.0 26 34495.0 27 40910.0 28 45941.0 29 52808.0 30 64130.0 31 77847.0 32 97703.0 33 128904.0 34 219042.0 35 329311.0 36 127425.0 37 147421.0 38 196400.0 39 269302.0 40 214.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.936310710816002 24.32674557781388 29.52489478687625 15.212048924493866 2 29.79730625184573 26.810380541233215 30.173235117025794 13.21907808989526 3 28.605656098917553 26.118264455651875 32.164275435592245 13.111804009838327 4 25.613564953516306 28.346653893955185 31.12205765877451 14.917723493753998 5 22.717634376959865 32.97890102505184 30.024115797569216 14.27934880041908 6 20.827085244283325 40.96069782415191 27.58394353292782 10.628273398636951 7 86.28232701271949 5.527380456707917 6.366215760732887 1.8240767698397047 8 89.03513852235172 3.4988776918959026 5.939571717627072 1.526412068125302 9 85.72738191763897 4.453230901196189 7.269227678799699 2.550159502365143 10 58.06642644786094 20.66147827438998 11.659847249223358 9.612248028525721 11 51.305028837735435 18.23168905543503 17.636516180333157 12.826765926496384 12 44.83070417920197 20.637059855388696 22.867379809724167 11.664856155685161 13 18.96095453060807 47.294877453972845 21.783473321833718 11.960694693585365 14 12.969258880112866 48.004107303298674 27.112428036101694 11.91420578048676 15 11.554868917961416 21.39570047991585 54.273640734096986 12.77578986802575 16 13.527125837296108 16.00643018367034 51.037417574791846 19.429026404241707 17 13.998850038558144 16.76256635496659 28.64045756360529 40.59812604286998 18 20.245373805297547 20.731968197618055 40.04959860919364 18.97305938789076 19 31.961206019453343 22.172028805386244 25.219948387393 20.646816787767417 20 34.36495936002872 21.33361091023309 25.407156266402865 18.894273463335328 21 20.335012360520217 30.75165946114602 28.46733723401924 20.445990944314527 22 22.156323796584136 24.040716148401376 22.75958396857746 31.04337608643703 23 16.997202317036646 32.00033810118617 24.501535542887197 26.500924038889984 24 16.92248612898143 22.086877395535602 45.19098021168891 15.79965626379406 25 15.434580029281234 24.677838615120844 40.79994323239343 19.08763812320449 26 15.086043621314149 37.512900542944585 26.76530038307699 20.63575545266427 27 14.656686420541526 39.980987025888744 27.316280093875257 18.04604645969448 28 13.678280025002792 29.318590451980764 40.74223645586475 16.260893067151695 29 13.339709253850335 24.2726911289136 39.12524666255519 23.262352954680875 30 17.564721854380654 35.660700850366226 29.99865385638839 16.77592343886473 31 32.44832217286363 27.703009413613582 23.4795099202436 16.369158493279194 32 34.139610745356585 23.433647120452722 25.828947931373808 16.597794202816885 33 32.442426272549206 26.66689624154617 21.78743870611598 19.103238779788644 34 19.228409265224727 26.24635680319067 25.732891714746952 28.792342216837646 35 19.770310333060976 24.89066496363847 33.03937313535631 22.299651567944252 36 35.29818124519328 24.972894511386393 23.241639039416963 16.487285204003367 37 19.07261140381908 38.09200317648151 27.007397528730774 15.827987890968629 38 19.611694961770564 37.088447896415815 22.522078320513664 20.777778821299957 39 20.289045208511382 36.110093676986054 25.181598947294827 18.419262167207734 40 27.006145302115325 23.879491971662112 25.074168338910958 24.040194387311605 41 16.129826681401198 23.733764099289047 27.16538678671346 32.97102243259629 42 19.557744865088235 23.288493185278405 25.321274391026545 31.832487558606815 43 19.849670194815154 23.51128517061066 27.614570908897385 29.024473725676803 44 16.537843853602187 28.988263506046692 32.48442804027578 21.989464600075344 45 15.491608516393212 43.56532918428915 21.986073152991832 18.95698914632581 46 21.851771848484752 35.48601523751086 24.47049075804582 18.191722155958566 47 19.448748973435055 29.05541415830023 25.24415810195838 26.25167876630634 48 20.347273746129837 24.79544356475525 34.377846858946064 20.479435830168853 49 21.503496321062556 24.4910481449828 35.48288467097224 18.522570862982406 50 19.902889825971805 38.15362316118348 24.037168172990935 17.906318839853782 51 17.320224607713925 36.50501464583379 24.557468331710655 21.61729241474163 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 8592.0 1 7278.5 2 5965.0 3 10510.0 4 15055.0 5 11162.0 6 7269.0 7 7414.5 8 7560.0 9 8208.5 10 8857.0 11 9414.5 12 9972.0 13 9743.0 14 9514.0 15 9437.5 16 9361.0 17 8662.0 18 7963.0 19 7154.0 20 6345.0 21 6555.0 22 6765.0 23 7639.0 24 8513.0 25 8792.5 26 11781.5 27 14491.0 28 15730.5 29 16970.0 30 22396.5 31 27823.0 32 31477.5 33 35132.0 34 44006.5 35 52881.0 36 57411.5 37 61942.0 38 72940.0 39 83938.0 40 120382.5 41 156827.0 42 194612.5 43 232398.0 44 227790.5 45 223183.0 46 200060.5 47 176938.0 48 159403.5 49 141869.0 50 128080.0 51 114291.0 52 103238.5 53 92186.0 54 81778.5 55 71371.0 56 64588.0 57 57805.0 58 55951.5 59 54098.0 60 52876.5 61 51655.0 62 44745.5 63 37836.0 64 33124.5 65 28413.0 66 24368.0 67 20323.0 68 17256.0 69 14189.0 70 12481.5 71 10774.0 72 9527.5 73 8281.0 74 6676.0 75 3877.0 76 2683.0 77 1979.5 78 1276.0 79 923.0 80 570.0 81 380.0 82 190.0 83 217.5 84 245.0 85 158.0 86 71.0 87 56.0 88 41.0 89 26.0 90 11.0 91 9.0 92 7.0 93 4.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1916586.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.999320999027184 #Duplication Level Percentage of deduplicated Percentage of total 1 79.70439927082091 13.54920668239313 2 7.3223083506575835 2.4894854021337114 3 2.6076320983683576 1.3298392526259162 4 1.3790797633094454 0.9377367831903877 5 0.8551905688052885 0.7268829497230872 6 0.5840012656456656 0.595657498712929 7 0.44820682478713275 0.5333448181957842 8 0.3420465312167495 0.4651647024605837 9 0.27123904209403243 0.41497915896225934 >10 3.630743360544798 15.108452468124078 >50 1.5757258626222705 18.83999770829757 >100 1.2550781032170268 41.27987165401868 >500 0.0221354162824819 2.3130902321748725 >1k 0.0015811011630344214 0.5473901425572096 >5k 6.324404652137685E-4 0.8689005464298081 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8362 0.43629662326657925 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7802 0.40707800223939866 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4140 0.21600909116522818 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2254 0.11760494963440202 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.028488155501501106 0.0 2 0.0 0.0 0.0 0.08948202689574065 0.0 3 0.0 0.0 0.0 0.1265270642694875 0.0 4 0.0 0.0 0.0 0.16670266818186086 0.0 5 0.0 0.0 0.0 0.29124704031021825 0.0 6 0.0 0.0 0.0 0.40806934830996366 0.0 7 0.0 0.0 0.0 0.4954121547376429 0.0 8 0.0 0.0 0.0 0.6921682616903181 0.0 9 0.0 0.0 0.0 0.7850417356695708 0.0 10 0.0 0.0 0.0 0.9399004271136281 0.0 11 0.0 0.0 0.0 1.0934025397242806 0.0 12 0.0 0.0 0.0 1.2340171534175872 0.0 13 5.217610897710825E-5 0.0 0.0 1.2918282821642233 0.0 14 5.217610897710825E-5 0.0 0.0 1.313846600152563 0.0 15 5.217610897710825E-5 0.0 0.0 1.3435869822695146 0.0 16 5.217610897710825E-5 0.0 0.0 1.411781156702595 0.0 17 5.217610897710825E-5 0.0 0.0 1.4938020000146093 0.0 18 5.217610897710825E-5 0.0 0.0 1.6380167652273365 0.0 19 5.217610897710825E-5 0.0 0.0 1.691288572492964 0.0 20 1.043522179542165E-4 0.0 0.0 1.753847727156517 0.0 21 1.5652832693132478E-4 0.0 0.0 1.8313814250964997 0.0 22 1.5652832693132478E-4 0.0 0.0 1.9126718028828344 0.0 23 1.5652832693132478E-4 0.0 0.0 2.021041581228288 0.0 24 2.6088054488554126E-4 0.0 0.0 2.0992535685849734 0.0 25 2.6088054488554126E-4 0.0 0.0 2.1554994140622963 0.0 26 2.6088054488554126E-4 0.0 0.0 2.22291094686072 0.0 27 2.6088054488554126E-4 0.0 0.0 2.285104868761433 0.0 28 2.6088054488554126E-4 0.0 0.0 2.3534555715214447 0.0 29 2.6088054488554126E-4 0.0 0.0 2.4304675083716565 0.0 30 2.6088054488554126E-4 0.0 0.0 2.545724533102089 0.0 31 2.6088054488554126E-4 0.0 0.0 2.6357804971965777 0.0 32 2.6088054488554126E-4 0.0 0.0 2.7209840831561953 0.0 33 2.6088054488554126E-4 0.0 0.0 2.8062920213337677 0.0 34 2.6088054488554126E-4 0.0 0.0 2.8983828536783633 0.0 35 3.1305665386264955E-4 0.0 0.0 3.0278839561595463 0.0 36 3.1305665386264955E-4 0.0 0.0 3.1225314178440207 0.0 37 3.1305665386264955E-4 0.0 0.0 3.2158223006950903 0.0 38 3.1305665386264955E-4 0.0 0.0 3.3090610074371827 0.0 39 3.1305665386264955E-4 0.0 0.0 3.406630331224375 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTACG 30 2.1662636E-6 45.000004 1 CTACGAT 60 0.0 45.000004 36 CTATCGA 45 3.8562575E-10 45.0 25 CGACTTA 20 7.0344686E-4 45.0 17 ATCGCTA 20 7.0344686E-4 45.0 41 TGCCGTA 20 7.0344686E-4 45.0 31 CGTATGG 195 0.0 42.69231 2 TGTATAC 70 0.0 41.785713 13 CGTTTTT 6195 0.0 40.569008 1 GTAGGGC 585 0.0 40.384613 4 TTCGTAC 175 0.0 39.857143 33 GTCGTTT 85 0.0 39.705883 9 AGGGCGA 1250 0.0 39.42 6 TCCGATT 40 3.459827E-7 39.375 40 GCGATAT 160 0.0 39.375 9 TAATGCG 80 0.0 39.375 1 TATGGGA 1405 0.0 38.91459 4 TAGCGGG 1285 0.0 38.871597 3 CGTTGAT 330 0.0 38.863636 25 GGACTAA 3060 0.0 38.82353 8 >>END_MODULE