##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545197_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 944734 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.08454125711576 31.0 31.0 33.0 30.0 34.0 2 31.332418437359088 31.0 31.0 34.0 28.0 34.0 3 31.426507355509592 31.0 31.0 34.0 30.0 34.0 4 35.20850842671059 37.0 35.0 37.0 32.0 37.0 5 35.057238333753205 37.0 35.0 37.0 32.0 37.0 6 35.1061558068197 37.0 35.0 37.0 32.0 37.0 7 35.767720861110114 37.0 35.0 37.0 35.0 37.0 8 35.78790220315983 37.0 35.0 37.0 35.0 37.0 9 37.5178928671986 39.0 37.0 39.0 35.0 39.0 10 36.672452775066844 39.0 35.0 39.0 32.0 39.0 11 36.255044277013425 38.0 35.0 39.0 31.0 39.0 12 34.979984842294236 35.0 34.0 39.0 30.0 39.0 13 34.39900331733588 35.0 33.0 39.0 25.0 39.0 14 35.24507850887128 36.0 33.0 40.0 26.0 41.0 15 35.74087203382116 36.0 33.0 40.0 30.0 41.0 16 36.00813456486164 36.0 34.0 40.0 31.0 41.0 17 35.980409300395664 36.0 34.0 40.0 31.0 41.0 18 35.92870162394917 36.0 34.0 40.0 30.0 41.0 19 35.8195333289582 36.0 34.0 40.0 30.0 41.0 20 35.654331272082935 36.0 34.0 40.0 30.0 41.0 21 35.48082634900406 35.0 34.0 40.0 30.0 41.0 22 35.370895934728715 35.0 34.0 40.0 30.0 41.0 23 35.370899110225736 35.0 34.0 40.0 30.0 41.0 24 35.29526829774307 35.0 34.0 40.0 29.0 41.0 25 35.23408070419822 35.0 34.0 40.0 29.0 41.0 26 35.077538227691605 35.0 34.0 40.0 29.0 41.0 27 34.999083339860746 35.0 34.0 40.0 29.0 41.0 28 35.03238795258771 35.0 34.0 40.0 29.0 41.0 29 35.081925706071765 36.0 34.0 40.0 29.0 41.0 30 35.02772632296498 36.0 34.0 40.0 29.0 41.0 31 34.79281681404501 35.0 34.0 40.0 29.0 41.0 32 34.56141940482718 35.0 33.0 40.0 27.0 41.0 33 34.3544817906416 35.0 33.0 40.0 26.0 41.0 34 34.238858768711616 35.0 33.0 40.0 25.0 41.0 35 34.077411207810876 35.0 33.0 40.0 24.0 41.0 36 33.84024074501394 35.0 33.0 39.0 23.0 41.0 37 33.75230064758969 35.0 33.0 39.0 23.0 41.0 38 33.7869379105653 35.0 33.0 39.0 23.0 41.0 39 33.76447021066247 35.0 33.0 39.0 23.0 41.0 40 33.57778697495803 35.0 33.0 39.0 23.0 41.0 41 33.586004102742145 35.0 33.0 39.0 23.0 41.0 42 33.563162752690175 35.0 33.0 39.0 23.0 41.0 43 33.46808096247197 35.0 33.0 39.0 23.0 41.0 44 33.37557979283057 35.0 32.0 39.0 23.0 41.0 45 33.31966669983297 35.0 32.0 39.0 23.0 41.0 46 33.26341806265044 35.0 32.0 39.0 23.0 41.0 47 33.167651423575315 35.0 32.0 38.0 23.0 40.0 48 33.17201349797933 35.0 32.0 38.0 23.0 40.0 49 33.200338931381744 35.0 32.0 38.0 23.0 40.0 50 33.08098787595238 35.0 32.0 38.0 23.0 40.0 51 32.916136182248124 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 13.0 15 34.0 16 114.0 17 328.0 18 721.0 19 1471.0 20 2334.0 21 3772.0 22 5436.0 23 7859.0 24 11008.0 25 14778.0 26 18434.0 27 21398.0 28 23637.0 29 27468.0 30 32465.0 31 39728.0 32 49460.0 33 63113.0 34 107269.0 35 157141.0 36 60932.0 37 69460.0 38 92611.0 39 133627.0 40 121.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.412298064852116 24.708542298678783 29.688356722633035 13.190802913836064 2 30.258040887699604 26.694392283965644 29.889259833985015 13.158306994349733 3 27.43481233871121 25.523586533352244 33.22501360171223 13.816587526224314 4 25.32331852140391 28.486854500843624 31.862513681099653 14.327313296652813 5 22.510039863072567 32.95943620108941 30.981736658149277 13.548787277688746 6 19.429172656006877 42.06411540179564 27.7882451568378 10.718466785359688 7 88.020755048511 4.412141406999219 6.282932550326335 1.2841709941634365 8 89.72948999400889 2.9594573710695284 5.742039558224855 1.569013076696721 9 86.45354142012461 4.47512209786035 7.030126998710748 2.041209483304295 10 55.919549841542704 23.98272953021697 12.007083475348617 8.090637152891714 11 52.538492316355715 18.547442983951036 18.690234499869803 10.223830199823443 12 46.022689984694104 22.11384368510078 20.38415045928272 11.479315870922397 13 20.679683381777306 47.70930230096514 19.958633858842806 11.652380458414749 14 13.701740384065781 48.35519839446871 25.2027554846126 12.740305736852914 15 11.501438500149249 23.14027017128631 51.913766202973534 13.444525125590905 16 12.743587083771729 17.902287839751718 50.5230043588989 18.831120717577647 17 14.018654986482968 18.828580319963077 27.18945226910432 39.96331242444963 18 20.280100006986093 23.23130108580828 36.01680473022036 20.471794176985266 19 28.770638084370837 24.84572376986538 24.6036450471773 21.77999309858648 20 31.641393238731748 23.669307974519814 23.895297512315636 20.7940012744328 21 20.106612019891312 31.353799058782684 26.982939113020173 21.55664980830583 22 21.73500689082853 26.52323299468422 24.211153615726754 27.530606498760495 23 16.711370608023 32.38731748830888 24.616558735051346 26.284753168616774 24 17.69376353555604 24.604915245984586 41.70284969102414 15.998471527435235 25 13.418168500339778 27.085295966907086 38.33195375629542 21.164581776457712 26 14.575848863277919 38.13412029206105 27.034805564317576 20.25522528034346 27 14.838356616783138 38.55614384578093 28.15946075826635 18.446038779169584 28 12.548399867052526 30.867630465294994 39.841055789248614 16.74291387840387 29 13.331477431742691 24.544474952738017 39.33615176335349 22.787895852165796 30 17.10333278997051 34.028837746921354 30.769295907631143 18.09853355547699 31 30.595384520933933 28.06451339742192 23.147997214030617 18.19210486761353 32 30.965647473257025 27.08201461998827 25.230488158571617 16.721849748183086 33 28.47595196108111 29.034521886583946 23.686879058020565 18.802647094314377 34 17.841741696604547 28.688710261301065 27.165847741268973 26.303700300825415 35 18.578351154928267 27.21496209515059 30.291912855893827 23.914773894027313 36 30.64566322372223 25.3460762500344 25.220961667516995 18.787298858726373 37 18.399994072405566 35.29289725996947 28.774236980991475 17.532871686633484 38 19.238748684814986 34.67420459092189 23.652054440720878 22.434992283542247 39 18.83069731797522 34.412967036223954 26.26548848670631 20.490847159094518 40 24.34431279069029 26.750175181585504 23.9588074526798 24.946704575044404 41 15.467210876288986 25.56391534548349 26.779389754153023 32.1894840240745 42 20.747956567668783 26.81643721936545 23.021400732904713 29.414205480061057 43 21.213166880836297 26.726358953948942 25.52104613573768 26.53942802947708 44 18.834296214595856 31.906758939553352 28.14792311910019 21.111021726750597 45 14.874663132691317 42.0940709236674 21.366014137312725 21.665251806328552 46 21.654560966367253 34.34956294576039 25.42789822320357 18.567977864668787 47 19.916717298202457 29.618284088431242 25.99948768648106 24.46551092688524 48 21.295412253607893 25.78217784053501 30.92394261241789 21.998467293439212 49 20.670368590523893 23.98971562365703 32.861419193127375 22.478496592691698 50 18.46509176127884 36.204900003598894 24.76855919232292 20.56144904279935 51 16.895020185576044 36.221835987696004 23.670260623625275 23.21288320310267 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 816.0 1 953.5 2 1091.0 3 3630.0 4 6169.0 5 4603.0 6 3037.0 7 3486.5 8 3936.0 9 4395.5 10 4855.0 11 5389.0 12 5923.0 13 6053.0 14 6183.0 15 5902.5 16 5622.0 17 5293.0 18 4964.0 19 4831.5 20 4699.0 21 4490.5 22 4282.0 23 4383.0 24 4484.0 25 5054.0 26 6251.0 27 6878.0 28 7943.5 29 9009.0 30 11182.5 31 13356.0 32 16297.0 33 19238.0 34 22427.5 35 25617.0 36 26761.0 37 27905.0 38 34084.5 39 40264.0 40 57750.0 41 75236.0 42 91195.5 43 107155.0 44 106685.5 45 106216.0 46 98658.5 47 91101.0 48 85069.5 49 79038.0 50 74229.5 51 69421.0 52 63646.0 53 57871.0 54 45787.0 55 33703.0 56 32697.5 57 31692.0 58 29431.5 59 27171.0 60 23890.5 61 20610.0 62 17182.0 63 13754.0 64 12496.5 65 11239.0 66 8390.0 67 5541.0 68 4547.5 69 3554.0 70 3265.0 71 2976.0 72 2331.5 73 1687.0 74 1526.0 75 1029.0 76 693.0 77 629.5 78 566.0 79 338.5 80 111.0 81 79.5 82 48.0 83 30.0 84 12.0 85 13.0 86 14.0 87 8.5 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 944734.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.575504923315446 #Duplication Level Percentage of deduplicated Percentage of total 1 80.76618077674902 15.810387694326359 2 8.002395965881549 3.1330188325686783 3 2.7213526613217134 1.5981555725934233 4 1.36085170054789 1.0655743665590967 5 0.8085958561198009 0.7914336081222816 6 0.5024063476605393 0.590091475928029 7 0.39873829554611046 0.5463852427304106 8 0.3014655004789086 0.4721071511067703 9 0.2613619897542244 0.4604663625481207 >10 2.772719737606863 11.956476934730633 >50 0.751055129474689 10.650444563472291 >100 1.3431079808163688 51.14652439791214 >500 0.00868271825982299 1.0512557541554963 >1k 0.0010853397824778738 0.7276780432462763 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4149 0.43917123761820787 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2701 0.28590058153935394 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0405405119324593 0.0 2 0.0 0.0 0.0 0.16745454276018434 0.0 3 0.0 0.0 0.0 0.24398402089900437 0.0 4 0.0 0.0 0.0 0.3612657107714976 0.0 5 0.0 0.0 0.0 0.6044029324656465 0.0 6 0.0 0.0 0.0 0.8370610139997079 0.0 7 0.0 0.0 0.0 0.9729722863790231 0.0 8 0.0 0.0 0.0 1.3034356760739 0.0 9 0.0 0.0 0.0 1.43468955282651 0.0 10 0.0 0.0 0.0 1.6688295329690686 0.0 11 0.0 0.0 0.0 1.9121784544644314 0.0 12 0.0 0.0 0.0 2.1173155618406874 0.0 13 0.0 0.0 0.0 2.1977614863019643 0.0 14 0.0 0.0 0.0 2.2290930568816196 0.0 15 0.0 0.0 0.0 2.285087654302693 0.0 16 0.0 0.0 0.0 2.417082480359551 0.0 17 0.0 0.0 0.0 2.5724701344505436 0.0 18 0.0 0.0 0.0 2.8122201593252703 0.0 19 0.0 0.0 0.0 2.9109781165915485 0.0 20 0.0 0.0 0.0 3.0067722766408322 0.0 21 0.0 0.0 0.0 3.126594364127892 0.0 22 0.0 0.0 0.0 3.2545668939616865 0.0 23 0.0 0.0 0.0 3.411013047058749 0.0 24 0.0 0.0 0.0 3.5198267448826868 0.0 25 0.0 0.0 0.0 3.6076821623864497 0.0 26 0.0 0.0 0.0 3.7086629675654734 0.0 27 0.0 0.0 0.0 3.8020225799007976 0.0 28 0.0 0.0 0.0 3.894323693230052 0.0 29 0.0 0.0 0.0 3.9978448960236426 0.0 30 0.0 0.0 0.0 4.140001312538767 0.0 31 0.0 0.0 0.0 4.26839724197499 0.0 32 0.0 0.0 0.0 4.3776343394013555 0.0 33 0.0 0.0 0.0 4.487824085933183 0.0 34 0.0 0.0 0.0 4.606058424911139 0.0 35 0.0 0.0 0.0 4.768326322541583 0.0 36 0.0 0.0 0.0 4.895028653568095 0.0 37 0.0 0.0 0.0 5.025224031314635 0.0 38 0.0 0.0 0.0 5.155313559160568 0.0 39 0.0 0.0 0.0 5.288155184422282 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGA 20 7.0326467E-4 45.000004 42 CCCTGCG 35 1.2116288E-7 45.000004 16 TGATCCC 20 7.0326467E-4 45.000004 24 AAATCGT 20 7.0326467E-4 45.000004 12 GTCGAAG 20 7.0326467E-4 45.000004 1 CTCCGAT 20 7.0326467E-4 45.000004 41 GCGCGAA 35 1.2116288E-7 45.000004 30 CGCATCC 20 7.0326467E-4 45.000004 27 GAGTACG 20 7.0326467E-4 45.000004 1 CGCGAAA 35 1.2116288E-7 45.000004 31 GACCCGT 40 6.8121153E-9 45.000004 27 TCAGGCG 40 6.8121153E-9 45.000004 20 ATCCGGC 20 7.0326467E-4 45.000004 21 ACCTACG 20 7.0326467E-4 45.000004 16 CCATCGG 20 7.0326467E-4 45.000004 15 CGTAGTG 20 7.0326467E-4 45.000004 21 CACTAGT 20 7.0326467E-4 45.000004 41 CGAGGTA 20 7.0326467E-4 45.000004 2 AGGCACG 20 7.0326467E-4 45.000004 1 CGCTAAT 20 7.0326467E-4 45.000004 24 >>END_MODULE