##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545196_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1516849 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.030289765164497 31.0 31.0 33.0 30.0 34.0 2 31.320949547384085 31.0 31.0 34.0 30.0 34.0 3 31.45424297342715 31.0 31.0 34.0 30.0 34.0 4 35.24034758898216 37.0 35.0 37.0 33.0 37.0 5 35.1041876943585 37.0 35.0 37.0 32.0 37.0 6 35.170209427569915 37.0 35.0 37.0 32.0 37.0 7 35.72559364841194 37.0 35.0 37.0 35.0 37.0 8 35.71483252452947 37.0 35.0 37.0 35.0 37.0 9 37.44910073448313 39.0 37.0 39.0 35.0 39.0 10 36.58663452987081 39.0 35.0 39.0 32.0 39.0 11 36.31714033499709 38.0 35.0 39.0 32.0 39.0 12 35.82354934472713 37.0 35.0 39.0 31.0 39.0 13 35.61878473071479 37.0 35.0 39.0 30.0 39.0 14 36.52422752693248 38.0 35.0 40.0 30.0 41.0 15 36.74680604331743 38.0 35.0 40.0 31.0 41.0 16 36.8207606689921 38.0 35.0 41.0 31.0 41.0 17 36.756773416470594 38.0 35.0 40.0 31.0 41.0 18 36.6663735150961 38.0 35.0 40.0 31.0 41.0 19 36.61012928775376 38.0 35.0 40.0 31.0 41.0 20 36.50421366925779 38.0 35.0 40.0 31.0 41.0 21 36.39787019011121 38.0 35.0 40.0 30.0 41.0 22 36.34747229289138 38.0 35.0 40.0 30.0 41.0 23 36.29353943602824 38.0 35.0 40.0 30.0 41.0 24 36.2095521703215 38.0 34.0 40.0 30.0 41.0 25 36.0886680216686 38.0 34.0 40.0 30.0 41.0 26 35.978614219345495 38.0 34.0 40.0 30.0 41.0 27 35.8880211543799 38.0 34.0 40.0 30.0 41.0 28 35.896095788044825 38.0 34.0 40.0 30.0 41.0 29 35.86169223172511 38.0 34.0 40.0 30.0 41.0 30 35.776995600748656 38.0 34.0 40.0 29.0 41.0 31 35.655264960454204 38.0 34.0 40.0 29.0 41.0 32 35.5264808824082 38.0 34.0 40.0 29.0 41.0 33 35.34707475826532 38.0 34.0 40.0 27.0 41.0 34 35.17393623228153 38.0 34.0 40.0 27.0 41.0 35 35.04561627426329 37.0 34.0 40.0 26.0 41.0 36 34.88853208196729 37.0 33.0 40.0 25.0 41.0 37 34.842020530718614 37.0 33.0 40.0 25.0 41.0 38 34.7913035509797 37.0 33.0 40.0 25.0 41.0 39 34.74538203868678 37.0 33.0 40.0 25.0 41.0 40 34.60438909871714 37.0 33.0 40.0 24.0 41.0 41 34.53322908213013 37.0 33.0 40.0 24.0 41.0 42 34.4826828510946 37.0 33.0 40.0 24.0 41.0 43 34.44295509968362 37.0 33.0 40.0 24.0 41.0 44 34.330562897163794 36.0 33.0 40.0 24.0 41.0 45 34.26244537195199 36.0 33.0 40.0 24.0 41.0 46 34.217084231851686 36.0 33.0 40.0 24.0 41.0 47 34.101788642112695 36.0 33.0 40.0 23.0 41.0 48 34.038337369111886 36.0 33.0 40.0 23.0 41.0 49 33.993171370386904 36.0 33.0 40.0 24.0 41.0 50 33.94220584909902 36.0 33.0 40.0 24.0 41.0 51 33.77792779637261 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 1.0 14 12.0 15 45.0 16 156.0 17 376.0 18 869.0 19 1611.0 20 2918.0 21 4571.0 22 6950.0 23 9854.0 24 14037.0 25 19356.0 26 25072.0 27 30144.0 28 33567.0 29 38623.0 30 46427.0 31 56871.0 32 69597.0 33 87086.0 34 128412.0 35 165435.0 36 123924.0 37 152068.0 38 206039.0 39 292680.0 40 146.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.25957362928017 23.481243024190277 28.728238605161096 13.530944741368456 2 31.307664770850625 25.387497371195156 30.48859840366444 12.816239454289782 3 29.46245802977093 25.289926683539367 31.94550017833021 13.3021151083595 4 26.039375046560338 27.637095056923926 31.52185880071121 14.801671095804526 5 22.393395782968508 33.1013172702095 30.53039557661969 13.974891370202307 6 20.3552891553477 42.15482226642204 27.531811010852103 9.958077567378163 7 89.18712409738873 3.436334137412491 6.018397348714341 1.3581444164844358 8 90.72584021217669 2.428916787366442 5.574318867599873 1.2709241328569951 9 86.41255655638761 4.260147186700851 6.889677219024438 2.4376190378870937 10 40.106892643895335 31.227168953534594 14.267801211590605 14.398137190979456 11 34.165892583902554 22.48147310641995 25.59430767334125 17.758326636336246 12 34.17439705600228 22.255676075865168 26.112684914582797 17.457241953549758 13 25.047714044047893 30.52874742311199 26.391288783524264 18.032249749315852 14 19.677898063683333 33.10876692406429 27.893481816581613 19.31985319567076 15 18.332543318418644 25.373850660151405 36.95034904594986 19.34325697548009 16 21.459090522523997 21.873304462078956 35.91036418259168 20.757240832805373 17 21.71587283902353 21.711653566043818 29.020818815847854 27.5516547790848 18 23.211736962611308 24.488396669675097 31.62463765345133 20.675228714262264 19 26.66099262352416 25.622721839813984 25.566882398973135 22.149403137688722 20 27.851355012924824 24.489517414060334 26.65578445843983 21.003343114575017 21 23.626412385148424 27.334164442208813 29.43674683505082 19.602676337591944 22 23.70954524807677 23.480122279805045 28.035091165963127 24.775241306155063 23 21.305944098588586 28.20583986936076 27.28887318381724 23.19934284823341 24 20.50045851630584 25.67308941100927 34.05751000923625 19.768942063448634 25 21.229733480392575 26.555510799031413 30.626515889188706 21.588239831387305 26 20.649913076384006 29.83698443286049 26.681495653159935 22.83160683759557 27 19.665372097024818 30.116313489345348 28.742742356028845 21.475572057600985 28 18.901090352434554 27.515065771213877 32.58821412019258 20.995629756158984 29 19.56958141515734 26.041616535330807 31.93640237096771 22.45239967854414 30 20.878544930972033 28.656840595207566 30.53402151433663 19.93059295948377 31 25.972723718708984 26.88652594951772 27.261184204887893 19.879566126885408 32 26.823632411663915 26.690066051399974 26.5529396795594 19.93336185737671 33 25.815423947934175 26.661058549664467 26.267413565885594 21.256103936515764 34 20.631453757097773 26.68400084649164 28.915732548196953 23.76881284821363 35 21.91233273714127 26.261612065538493 29.151088869096398 22.67496632822384 36 26.429657797183502 27.293092456796952 25.623381101217063 20.653868644802483 37 21.290781086317757 30.756654090156633 27.338054084486984 20.614510739038625 38 21.728992140944815 30.61122102463726 26.09936783424059 21.56041900017734 39 21.456387550771368 29.44933872784964 25.93751915978453 23.156754561594465 40 23.598525627798153 26.795416023612106 26.997281865235102 22.60877648335464 41 20.916716166210346 25.0684807782449 27.988019901783233 26.026783153761514 42 21.47425353479483 26.665607453345718 25.70427247537494 26.155866536484513 43 20.931483621639334 27.153856448466524 26.495320232930236 25.419339696963906 44 21.752461846894448 27.86981433221105 27.723524226867667 22.654199594026828 45 20.045963705022714 31.2917106448961 25.415450054685735 23.246875595395455 46 22.152172035581657 29.7584663997537 26.84288284463384 21.2464787200308 47 21.604391735762757 28.168987156928605 27.779231815427902 22.447389291880736 48 21.296318882103623 27.866847655897192 28.73173269059742 22.105100771401766 49 21.59740356489011 26.54239149711013 29.278655950592313 22.581548987407448 50 21.338181981199185 29.31122346390445 27.965011678815756 21.385582876080612 51 20.91091466586325 29.534383448846917 26.903139336875327 22.651562548414507 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 673.0 1 1157.5 2 1642.0 3 7398.0 4 13154.0 5 9441.5 6 5729.0 7 5942.5 8 6156.0 9 6500.0 10 6844.0 11 7022.5 12 7201.0 13 7075.5 14 6950.0 15 6551.0 16 6152.0 17 5772.5 18 5393.0 19 5281.0 20 5169.0 21 4980.5 22 4792.0 23 5096.5 24 5401.0 25 6789.0 26 10176.0 27 12175.0 28 15076.5 29 17978.0 30 20529.5 31 23081.0 32 28464.0 33 33847.0 34 39272.0 35 44697.0 36 48335.0 37 51973.0 38 58029.5 39 64086.0 40 76445.5 41 88805.0 42 100915.0 43 113025.0 44 115218.0 45 117411.0 46 114606.5 47 111802.0 48 116446.0 49 121090.0 50 118684.5 51 116279.0 52 110063.0 53 103847.0 54 96528.0 55 89209.0 56 84083.5 57 78958.0 58 72908.5 59 66859.0 60 60069.0 61 53279.0 62 47058.0 63 40837.0 64 34741.0 65 28645.0 66 24066.0 67 19487.0 68 15265.5 69 11044.0 70 10549.5 71 10055.0 72 8354.5 73 6654.0 74 5232.5 75 3096.5 76 2382.0 77 1633.0 78 884.0 79 811.0 80 738.0 81 521.0 82 304.0 83 201.5 84 99.0 85 70.0 86 41.0 87 33.5 88 26.0 89 17.0 90 8.0 91 4.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1516849.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.002993258681197 #Duplication Level Percentage of deduplicated Percentage of total 1 76.45640411624926 15.293569361203394 2 7.299050798274576 2.920057278253159 3 2.9941057793862615 1.7967323316252541 4 1.6957986344949358 1.3568419461553194 5 1.1803748120923407 1.180551470450009 6 0.870603214879591 1.0448802142933584 7 0.682381050879212 0.955476449241207 8 0.5827481629823698 0.9325366060516156 9 0.4604101270801114 0.8288622601390819 >10 5.345279031585074 23.993903078150606 >50 1.4843130288821844 21.39483588814693 >100 0.942247389092425 26.787183777820694 >500 0.004630208300203927 0.6196807457605882 >1k 0.001322916657201122 0.3799985271323603 >5k 3.307291643002805E-4 0.5148900655764556 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7783 0.5131031500169101 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1938 0.12776485991684078 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.592614030796737E-5 0.0 0.0 0.019909694373006145 0.0 2 6.592614030796737E-5 0.0 0.0 0.07443061240769516 0.0 3 6.592614030796737E-5 0.0 0.0 0.1066684950182912 0.0 4 6.592614030796737E-5 0.0 0.0 0.14694936674645928 0.0 5 6.592614030796737E-5 0.0 0.0 0.25038748088966006 0.0 6 6.592614030796737E-5 0.0 0.0 0.36945009028584913 0.0 7 6.592614030796737E-5 0.0 0.0 0.4471110835686347 0.0 8 6.592614030796737E-5 0.0 0.0 0.6484495160691671 0.0 9 6.592614030796737E-5 0.0 0.0 0.7418668568855569 0.0 10 6.592614030796737E-5 0.0 0.0 0.901276264150222 0.0 11 6.592614030796737E-5 0.0 0.0 1.050664898088076 0.0 12 6.592614030796737E-5 0.0 0.0 1.1833742185280143 0.0 13 6.592614030796737E-5 0.0 0.0 1.2400706991928663 0.0 14 6.592614030796737E-5 0.0 0.0 1.2681552349640604 0.0 15 6.592614030796737E-5 0.0 0.0 1.3007886744165043 0.0 16 1.3185228061593474E-4 0.0 0.0 1.378185963138058 0.0 17 1.3185228061593474E-4 0.0 0.0 1.4652084683445747 0.0 18 1.3185228061593474E-4 0.0 0.0 1.5891496121235535 0.0 19 1.3185228061593474E-4 0.0 0.0 1.6440001608597823 0.0 20 1.3185228061593474E-4 0.0 0.0 1.7097944488871337 0.0 21 1.3185228061593474E-4 0.0 0.0 1.7920043458511692 0.0 22 1.3185228061593474E-4 0.0 0.0 1.8783016635142984 0.0 23 1.3185228061593474E-4 0.0 0.0 1.9733012316980794 0.0 24 1.3185228061593474E-4 0.0 0.0 2.0477318441057744 0.0 25 1.3185228061593474E-4 0.0 0.0 2.113789836694358 0.0 26 1.3185228061593474E-4 0.0 0.0 2.1793863463007854 0.0 27 1.3185228061593474E-4 0.0 0.0 2.26258513536944 0.0 28 1.3185228061593474E-4 0.0 0.0 2.3326646225168095 0.0 29 1.3185228061593474E-4 0.0 0.0 2.417050082111008 0.0 30 1.9777842092390211E-4 0.0 0.0 2.5233230202874513 0.0 31 2.637045612318695E-4 0.0 0.0 2.612455161983823 0.0 32 2.637045612318695E-4 0.0 0.0 2.6919620871952317 0.0 33 2.637045612318695E-4 0.0 0.0 2.7802371890676 0.0 34 2.637045612318695E-4 0.0 0.0 2.875302683391689 0.0 35 2.637045612318695E-4 0.0 0.0 2.990343798229092 0.0 36 2.637045612318695E-4 0.0 0.0 3.087123372201188 0.0 37 2.637045612318695E-4 0.0 0.0 3.186210361084063 0.0 38 2.637045612318695E-4 0.0 0.0 3.308173720653803 0.0 39 2.637045612318695E-4 0.0 0.0 3.505490658595549 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 20 7.0339994E-4 45.000004 1 CGTTACA 20 7.0339994E-4 45.000004 39 GACGATA 20 7.0339994E-4 45.000004 9 TAGTACG 75 0.0 45.000004 1 TCTATCG 20 7.0339994E-4 45.000004 32 AACGTTG 45 3.8562575E-10 45.0 1 CGACACG 25 3.8913975E-5 45.0 26 CGCATTA 30 2.1659635E-6 44.999996 16 GGCGTAG 130 0.0 43.26923 1 CGTTTTT 5310 0.0 43.008472 1 CTAGACG 80 0.0 42.187504 1 ATACTCG 80 0.0 42.187504 44 CGGTCTA 575 0.0 41.869564 31 TAGGGTA 1010 0.0 41.658413 5 ACGGGAT 660 0.0 41.590908 5 GCGTAAG 65 0.0 41.53846 1 CGACGGT 590 0.0 41.18644 28 AATCGTT 295 0.0 41.18644 22 ATTTACG 55 6.184564E-11 40.909092 1 GGTCTAA 590 0.0 40.805084 32 >>END_MODULE