SRR1545195_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545195_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1816103
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6454	0.3553763195149174	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2228	0.12268026648268299	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGAA	60	0.0	45.000004	27
AACCGGT	20	7.0343685E-4	45.0	41
AGGCGTA	25	3.8917027E-5	45.0	13
TCTAGCG	40	6.8193913E-9	45.0	1
TACGCTT	25	3.8917027E-5	45.0	23
GTTCGAC	25	3.8917027E-5	45.0	41
TATTACG	20	7.0343685E-4	45.0	1
TCCCGTA	35	1.2124474E-7	45.0	41
TCGTAAT	20	7.0343685E-4	45.0	32
ACGTATC	20	7.0343685E-4	45.0	39
GTCCAAT	25	3.8917027E-5	45.0	10
TAGTCCG	25	3.8917027E-5	45.0	25
TACCGTA	20	7.0343685E-4	45.0	35
CTTACGC	25	3.8917027E-5	45.0	45
ACGGTAC	20	7.0343685E-4	45.0	13
TCACGAC	525	0.0	43.714283	25
CGGTCTA	525	0.0	43.714283	31
TACGGGT	130	0.0	43.269234	4
TAACGGG	770	0.0	42.954544	3
CGAATAT	105	0.0	42.857143	14