##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545195_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1816103 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07628256767375 31.0 31.0 33.0 30.0 34.0 2 31.35284782856479 31.0 31.0 34.0 30.0 34.0 3 31.479389109538392 31.0 31.0 34.0 30.0 34.0 4 35.24717320548449 37.0 35.0 37.0 33.0 37.0 5 35.10103226524046 37.0 35.0 37.0 32.0 37.0 6 35.15400227850513 37.0 35.0 37.0 32.0 37.0 7 35.76448472360874 37.0 35.0 37.0 35.0 37.0 8 35.76169358235739 37.0 35.0 37.0 35.0 37.0 9 37.487056075564 39.0 37.0 39.0 35.0 39.0 10 36.627812959947754 39.0 35.0 39.0 32.0 39.0 11 36.29405490767869 38.0 35.0 39.0 32.0 39.0 12 35.58922814399844 37.0 35.0 39.0 30.0 39.0 13 35.29184633250427 37.0 35.0 39.0 30.0 39.0 14 36.23937684151174 38.0 35.0 40.0 30.0 41.0 15 36.51696682401824 38.0 35.0 40.0 31.0 41.0 16 36.645391808724504 38.0 35.0 40.0 31.0 41.0 17 36.570017229199 38.0 35.0 40.0 31.0 41.0 18 36.52737317211634 38.0 35.0 40.0 31.0 41.0 19 36.46416530339964 38.0 35.0 40.0 31.0 41.0 20 36.345984231070595 38.0 35.0 40.0 31.0 41.0 21 36.226811474899826 38.0 34.0 40.0 30.0 41.0 22 36.131516769698635 38.0 34.0 40.0 30.0 41.0 23 36.07995306433611 38.0 34.0 40.0 30.0 41.0 24 36.00041572531954 37.0 34.0 40.0 30.0 41.0 25 35.90629331045651 37.0 34.0 40.0 30.0 41.0 26 35.73963205831387 37.0 34.0 40.0 30.0 41.0 27 35.669685585013625 37.0 34.0 40.0 29.0 41.0 28 35.65113432442984 37.0 34.0 40.0 29.0 41.0 29 35.64098291781909 37.0 34.0 40.0 29.0 41.0 30 35.58705425848644 37.0 34.0 40.0 29.0 41.0 31 35.456830917629674 37.0 34.0 40.0 29.0 41.0 32 35.3008293031838 37.0 34.0 40.0 28.0 41.0 33 35.115146552811154 37.0 34.0 40.0 27.0 41.0 34 34.998740159561436 37.0 34.0 40.0 27.0 41.0 35 34.88374117547298 37.0 33.0 40.0 26.0 41.0 36 34.71396446126679 37.0 33.0 40.0 25.0 41.0 37 34.66037278722627 36.0 33.0 40.0 25.0 41.0 38 34.63526352855537 36.0 33.0 40.0 26.0 41.0 39 34.58855637593242 36.0 33.0 40.0 25.0 41.0 40 34.485899753483146 36.0 33.0 40.0 24.0 41.0 41 34.42753797554434 36.0 33.0 40.0 24.0 41.0 42 34.33774626218887 36.0 33.0 40.0 24.0 41.0 43 34.26367667472605 36.0 33.0 40.0 24.0 41.0 44 34.13934121577906 35.0 33.0 40.0 24.0 41.0 45 34.05799726116856 35.0 33.0 40.0 24.0 41.0 46 34.004485428414576 35.0 33.0 39.0 24.0 41.0 47 33.90341186595694 35.0 33.0 39.0 23.0 41.0 48 33.840011276893435 35.0 33.0 39.0 23.0 41.0 49 33.81871622920065 35.0 33.0 39.0 24.0 41.0 50 33.755695574535146 35.0 33.0 39.0 24.0 41.0 51 33.573116172375684 35.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 7.0 14 14.0 15 55.0 16 165.0 17 422.0 18 1007.0 19 1920.0 20 3301.0 21 5329.0 22 8122.0 23 11626.0 24 16379.0 25 22666.0 26 29640.0 27 35815.0 28 41544.0 29 48465.0 30 57988.0 31 70646.0 32 87049.0 33 109616.0 34 168505.0 35 231771.0 36 143093.0 37 175091.0 38 229165.0 39 316495.0 40 204.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.60332536205271 23.768640875545056 29.407252782468834 13.220780979933409 2 29.968234180550336 25.624207437573748 30.962120540520004 13.445437841355915 3 28.601020977334436 26.151600432354332 31.673203557287223 13.574175033024009 4 26.055240258950068 28.552895953588536 30.620289708237912 14.771574079223479 5 22.87700642529636 33.32393592213658 29.648098153023263 14.150959499543802 6 19.999196080839027 42.568235391935374 26.471130767362865 10.96143775986274 7 89.55455720297803 3.3844996676950587 5.551887750859946 1.5090553784669702 8 90.60521347082187 2.580084940116282 5.040573139298817 1.7741284497630367 9 86.59888783841005 4.546933736687842 6.356247415482493 2.49793100941962 10 45.891339863432854 29.336662072580683 12.771742571869545 12.000255492116912 11 40.169748081468946 22.36530637304162 20.95635544900262 16.50859009648682 12 36.27580594272462 22.00012884731758 24.390632029130508 17.3334331808273 13 22.937410488281778 35.12978063468867 24.699700402455147 17.233108474574404 14 18.207832925775687 36.547156191031014 27.457253250503967 17.787757632689335 15 16.431336768894717 22.83306618622402 41.89349392628061 18.842103118600654 16 18.99137879294291 18.76969533115688 39.292595188709015 22.9463306871912 17 18.4717496749909 20.264929907609865 28.48891279844811 32.77440761895113 18 22.50885549993585 23.07424193451583 32.60250106959792 21.814401495950396 19 27.746058455935596 24.754212729123847 25.28022914999865 22.21949966494191 20 29.72920588755153 23.843085992369375 24.800300423489197 21.627407696589895 21 23.043461741982696 27.399106768724018 27.083706155432814 22.473725333860468 22 23.19136084241918 23.55229852051343 25.1078820969956 28.14845854007179 23 20.82569105386644 27.440459048853505 25.586654501424206 26.147195395855853 24 20.838355533799568 23.848977728686094 35.75661732842245 19.556049409091887 25 19.767325972150257 25.791048194953703 32.22256667160398 22.219059161292062 26 19.67762841644995 30.613241649840344 26.16195226812576 23.547177665583945 27 19.80906369297336 30.016469330208693 27.235734977586624 22.938731999231322 28 18.52780376443407 26.609008409765305 34.40553757138224 20.45765025441839 29 19.250505064966028 23.854539087265426 33.54429787297306 23.35065797479548 30 21.1381733304774 27.889001890311288 29.958598163209903 21.014226616001405 31 29.040863871707717 25.81681765846981 24.236290562814993 20.906027907007477 32 29.631854580935112 24.758177261972474 25.28353292737251 20.3264352297199 33 27.187499827928264 25.916096168554315 24.455110750877015 22.441293252640406 34 20.362556529007442 26.39007809579082 27.210736395457747 26.03662897974399 35 21.833398215850092 24.36899228733172 29.33264247677582 24.464967020042366 36 28.915375394457254 25.876616028936684 25.28887403412692 19.919134542479146 37 21.51381281788533 31.23258978152671 26.244766954297194 21.008830446290766 38 21.03845431674305 30.94659278686286 25.426090921054588 22.588861975339505 39 20.773050867709596 29.848582376660353 26.574373810296002 22.80399294533405 40 23.547122602627717 25.73163526518044 26.136843560084422 24.584398572107418 41 20.215152995177036 23.269715429135903 27.447452044294845 29.067679531392216 42 21.849862039763163 25.81009997780963 24.379178934234456 27.96085904819275 43 21.995888999687793 25.34817683798771 26.431099998182923 26.22483416414157 44 21.10634694177588 26.83074693450757 28.651513708198266 23.411392415518286 45 18.886593987235305 32.74549956692985 24.488919406002854 23.87898703983199 46 22.319879434151034 28.746056804046905 27.360012069800003 21.57405169200205 47 20.622949249023872 27.199448489430388 27.509893436660803 24.667708824884933 48 21.196540064082267 24.675527764669734 30.467545067653102 23.660387103594896 49 20.845568781065833 24.269163147684907 31.57188771782217 23.31338035342709 50 20.48716399895821 28.864772537680956 28.479386907020142 22.168676556340692 51 19.510677533157537 29.21161409898007 26.727834269311817 24.54987409855058 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 851.0 1 1447.5 2 2044.0 3 6791.0 4 11538.0 5 8559.5 6 5581.0 7 5850.0 8 6119.0 9 6385.0 10 6651.0 11 6760.0 12 6869.0 13 6763.0 14 6657.0 15 6313.5 16 5970.0 17 5622.0 18 5274.0 19 5720.5 20 6167.0 21 5781.5 22 5396.0 23 5399.5 24 5403.0 25 6326.0 26 8821.0 27 10393.0 28 15375.5 29 20358.0 30 24814.5 31 29271.0 32 32639.0 33 36007.0 34 39390.0 35 42773.0 36 46869.5 37 50966.0 38 57893.5 39 64821.0 40 85394.0 41 105967.0 42 123846.5 43 141726.0 44 148617.0 45 155508.0 46 152757.5 47 150007.0 48 150700.0 49 151393.0 50 145460.0 51 139527.0 52 130901.5 53 122276.0 54 108369.0 55 94462.0 56 95701.5 57 96941.0 58 87883.5 59 78826.0 60 73130.0 61 67434.0 62 58212.5 63 48991.0 64 43724.5 65 38458.0 66 33632.0 67 28806.0 68 26340.5 69 23875.0 70 19057.5 71 14240.0 72 11802.0 73 9364.0 74 7521.5 75 4538.5 76 3398.0 77 2395.0 78 1392.0 79 1082.0 80 772.0 81 622.5 82 473.0 83 330.5 84 188.0 85 107.5 86 27.0 87 19.0 88 11.0 89 6.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1816103.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.84827928327227 #Duplication Level Percentage of deduplicated Percentage of total 1 79.09881539430448 14.117777481335422 2 8.04107070388844 2.8703855131907927 3 2.8391356815853452 1.5202105970411643 4 1.4354703084316645 1.0248269987093332 5 0.8784212108258345 0.7839153549584841 6 0.6177771041038748 0.6615754973314274 7 0.4779444596939089 0.5971340338956687 8 0.37239957194850737 0.5317353252086404 9 0.3093196738427994 0.4968741533901274 >10 3.3909109203236407 13.865925133798207 >50 1.0284737718949781 13.24656485887051 >100 1.498208777063869 48.414001529391626 >500 0.010816276237047562 1.2481082357226485 >1k 9.271093917469338E-4 0.2649775483653705 >5k 3.090364639156446E-4 0.35598773879061224 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6454 0.3553763195149174 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2228 0.12268026648268299 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04405036498480538 0.0 2 0.0 0.0 0.0 0.1492206113860282 0.0 3 0.0 0.0 0.0 0.21149681488329683 0.0 4 0.0 0.0 0.0 0.31022469540549186 0.0 5 0.0 0.0 0.0 0.5139576334602167 0.0 6 0.0 0.0 0.0 0.7440106645933628 0.0 7 0.0 0.0 0.0 0.8986274456900297 0.0 8 0.0 0.0 0.0 1.3080205252675647 0.0 9 0.0 0.0 0.0 1.5029984532815595 0.0 10 0.0 0.0 0.0 1.8376160382973874 0.0 11 0.0 0.0 0.0 2.1102877975533327 0.0 12 0.0 0.0 0.0 2.374094420856086 0.0 13 0.0 0.0 0.0 2.476181141708372 0.0 14 0.0 0.0 0.0 2.5175884847940893 0.0 15 0.0 0.0 0.0 2.5737527001497162 0.0 16 0.0 0.0 0.0 2.7006728142621865 0.0 17 0.0 0.0 0.0 2.85292188824092 0.0 18 0.0 0.0 0.0 3.0853426264919994 0.0 19 0.0 0.0 0.0 3.177628141135167 0.0 20 0.0 0.0 0.0 3.276851588263441 0.0 21 0.0 0.0 0.0 3.3979900919716557 0.0 22 0.0 0.0 0.0 3.5239741358281993 0.0 23 0.0 0.0 0.0 3.678425728056173 0.0 24 0.0 0.0 0.0 3.7886067034744175 0.0 25 0.0 0.0 0.0 3.8713112637333897 0.0 26 0.0 0.0 0.0 3.9607335046525445 0.0 27 0.0 0.0 0.0 4.0501557455717 0.0 28 5.506295623100672E-5 0.0 0.0 4.144038085945565 0.0 29 5.506295623100672E-5 0.0 0.0 4.243922288548612 0.0 30 5.506295623100672E-5 0.0 0.0 4.372163913610627 0.0 31 5.506295623100672E-5 0.0 0.0 4.486419547789966 0.0 32 5.506295623100672E-5 0.0 0.0 4.587680324298787 0.0 33 5.506295623100672E-5 0.0 0.0 4.695768907380253 0.0 34 1.1012591246201344E-4 0.0 0.0 4.804903686630109 0.0 35 1.1012591246201344E-4 0.0 0.0 4.957703390171152 0.0 36 1.1012591246201344E-4 0.0 0.0 5.072784968693957 0.0 37 1.1012591246201344E-4 0.0 0.0 5.183296321849586 0.0 38 1.1012591246201344E-4 0.0 0.0 5.304159510776646 0.0 39 1.1012591246201344E-4 0.0 0.0 5.426619525434406 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGAA 60 0.0 45.000004 27 AACCGGT 20 7.0343685E-4 45.0 41 AGGCGTA 25 3.8917027E-5 45.0 13 TCTAGCG 40 6.8193913E-9 45.0 1 TACGCTT 25 3.8917027E-5 45.0 23 GTTCGAC 25 3.8917027E-5 45.0 41 TATTACG 20 7.0343685E-4 45.0 1 TCCCGTA 35 1.2124474E-7 45.0 41 TCGTAAT 20 7.0343685E-4 45.0 32 ACGTATC 20 7.0343685E-4 45.0 39 GTCCAAT 25 3.8917027E-5 45.0 10 TAGTCCG 25 3.8917027E-5 45.0 25 TACCGTA 20 7.0343685E-4 45.0 35 CTTACGC 25 3.8917027E-5 45.0 45 ACGGTAC 20 7.0343685E-4 45.0 13 TCACGAC 525 0.0 43.714283 25 CGGTCTA 525 0.0 43.714283 31 TACGGGT 130 0.0 43.269234 4 TAACGGG 770 0.0 42.954544 3 CGAATAT 105 0.0 42.857143 14 >>END_MODULE