##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545193_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1328140 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.02440405378951 31.0 31.0 33.0 30.0 34.0 2 31.290357191259957 31.0 31.0 34.0 28.0 34.0 3 31.405966991431626 31.0 31.0 34.0 28.0 34.0 4 35.18099070881082 37.0 35.0 37.0 32.0 37.0 5 35.021442769587544 35.0 35.0 37.0 32.0 37.0 6 35.09549520381888 37.0 35.0 37.0 32.0 37.0 7 35.729711476199796 37.0 35.0 37.0 35.0 37.0 8 35.74108603008719 37.0 35.0 37.0 35.0 37.0 9 37.430766334874335 39.0 37.0 39.0 35.0 39.0 10 36.5758112849549 39.0 35.0 39.0 32.0 39.0 11 36.25284683843571 38.0 35.0 39.0 31.0 39.0 12 35.51530335657385 37.0 35.0 39.0 30.0 39.0 13 35.20195386028581 37.0 34.0 39.0 30.0 39.0 14 36.1337554775852 38.0 35.0 40.0 30.0 41.0 15 36.43366663152981 38.0 35.0 40.0 30.0 41.0 16 36.55589169816435 38.0 35.0 40.0 31.0 41.0 17 36.49142936738597 38.0 35.0 40.0 31.0 41.0 18 36.40540680952309 38.0 35.0 40.0 31.0 41.0 19 36.35386329754393 38.0 35.0 40.0 30.0 41.0 20 36.238602858132424 38.0 34.0 40.0 30.0 41.0 21 36.08482388904784 38.0 34.0 40.0 30.0 41.0 22 35.981538090863914 38.0 34.0 40.0 30.0 41.0 23 35.90680425256374 37.0 34.0 40.0 30.0 41.0 24 35.840380532172816 37.0 34.0 40.0 30.0 41.0 25 35.72559519327782 37.0 34.0 40.0 29.0 41.0 26 35.55972713719939 37.0 34.0 40.0 29.0 41.0 27 35.48785971358441 37.0 34.0 40.0 29.0 41.0 28 35.492486484858524 37.0 34.0 40.0 29.0 41.0 29 35.47259852124023 37.0 34.0 40.0 29.0 41.0 30 35.426901531465056 37.0 34.0 40.0 29.0 41.0 31 35.2842501543512 37.0 34.0 40.0 28.0 41.0 32 35.14178701040553 37.0 34.0 40.0 27.0 41.0 33 34.951923742978906 37.0 33.0 40.0 27.0 41.0 34 34.80640820997787 37.0 34.0 40.0 26.0 41.0 35 34.67368726188504 37.0 33.0 40.0 25.0 41.0 36 34.52690830785911 36.0 33.0 40.0 24.0 41.0 37 34.455031096119384 36.0 33.0 40.0 24.0 41.0 38 34.40618534190673 36.0 33.0 40.0 24.0 41.0 39 34.37756637101511 36.0 33.0 40.0 24.0 41.0 40 34.22307889228545 36.0 33.0 40.0 23.0 41.0 41 34.19933440751728 36.0 33.0 40.0 23.0 41.0 42 34.124285843359885 36.0 33.0 40.0 23.0 41.0 43 34.05309078862168 35.0 33.0 40.0 23.0 41.0 44 33.928112247202854 35.0 33.0 40.0 23.0 41.0 45 33.841101841673314 35.0 33.0 40.0 23.0 41.0 46 33.777422560874605 35.0 33.0 39.0 23.0 41.0 47 33.67895026126764 35.0 32.0 39.0 23.0 41.0 48 33.622856777146986 35.0 32.0 39.0 23.0 41.0 49 33.60269474603581 35.0 32.0 39.0 23.0 41.0 50 33.53060294848434 35.0 32.0 39.0 23.0 41.0 51 33.36820892375804 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 5.0 14 11.0 15 41.0 16 141.0 17 432.0 18 934.0 19 1774.0 20 2944.0 21 4940.0 22 7064.0 23 9957.0 24 13716.0 25 18596.0 26 23364.0 27 27562.0 28 31715.0 29 36271.0 30 43037.0 31 52547.0 32 64047.0 33 80827.0 34 123372.0 35 165224.0 36 103851.0 37 125492.0 38 164748.0 39 225428.0 40 98.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.88653304621501 23.2989745056997 28.512054452090897 13.3024379959944 2 30.919631966509552 25.387986206273432 30.70293794328911 12.989443883927898 3 28.672956164259794 26.621365217522246 31.64003794780671 13.065640670411252 4 27.101284503139727 28.754047013116086 29.79964461577846 14.345023867965725 5 22.732618549249324 32.99817790293192 30.334302106705618 13.934901441113134 6 20.50024846778201 43.24551628593371 26.06901380878522 10.18522143749906 7 88.59713584411281 4.020886352342373 5.893354616230217 1.4886231873145903 8 90.30207658831148 2.946376135046004 5.274594545755718 1.4769527308868042 9 85.86813137169274 5.307422410288072 6.476877437619528 2.3475687803996568 10 44.35247790142605 32.524357371963795 12.17236134744831 10.950803379161837 11 41.46889635128827 22.49371301218245 20.92015901938049 15.117231617148793 12 38.018657671631004 22.004909121026397 23.777312632704383 16.199120574638215 13 23.382550032376102 35.926709533633506 24.623458370352523 16.06728206363787 14 18.04629030072131 37.04383574020811 27.53610312165886 17.37377083741172 15 16.37395154125318 23.99317842998479 41.211167497402386 18.421702531359646 16 19.35526375231527 19.75318866986914 40.18371557215354 20.707832005662052 17 19.33523574321984 20.59669914316262 28.18814281626937 31.879922297348173 18 22.57487915430602 23.253422078997694 31.783396328700285 22.388302437995993 19 27.88764738657069 24.906109295706777 24.96423569804388 22.242007619678645 20 30.026503230081165 23.690951255138764 25.24477841191441 21.03776710286566 21 24.076528076859365 27.236285331365668 27.579999096480794 21.107187495294173 22 23.891607812429413 24.91348803589983 24.27936813890102 26.915536012769735 23 21.470477509901066 28.8071287665457 25.167753399491016 24.55464032406222 24 21.11065098558887 24.567891939102807 34.56472962187721 19.756727453431115 25 20.279187435059555 25.86060204496514 32.23357477374373 21.62663574623157 26 19.782251871037694 32.32806782417516 26.05719276582288 21.832487538964266 27 19.682111825560558 31.594485521104705 27.726369208065414 20.997033445269324 28 18.367190205851795 27.6038670622073 34.5456051319891 19.48333759995181 29 19.237956841899198 24.50697968587649 33.83958016474167 22.415483307482646 30 21.43998373665427 28.753444666977877 29.392458626349633 20.414112970018223 31 27.77342750011294 26.869381239929524 25.03674311443071 20.320448145526825 32 29.013357025614773 25.900507476621442 26.174876142575332 18.91125935518846 33 27.872513439848206 27.04391103347539 24.213637116569036 20.86993841010737 34 21.147017633683195 28.01722709955276 26.653741322450948 24.1820139443131 35 21.824732332434834 26.790323309289683 28.66294215971208 22.722002198563406 36 28.682593702471127 26.159742195852846 25.28618970891623 19.8714743927598 37 22.192464649811015 32.265047359465115 26.006219223877004 19.536268766846867 38 21.932702877708678 31.30859698525758 24.315734786995346 22.4429653500384 39 22.255786287590162 30.156308822865057 25.338142063336694 22.24976282620808 40 23.544882316623248 26.64018853434126 26.163431565949374 23.65149758308612 41 19.928170223018657 25.004216422967456 26.81818181818182 28.249431535832066 42 22.447708825876788 26.25114822232596 24.663966148147033 26.63717680365022 43 22.1334347282666 27.24916048006987 25.259987651904165 25.357417139759363 44 21.467089312873643 29.027587453129943 26.98435405906004 22.52096917493638 45 20.03937837878537 33.49172526992636 23.95078832050838 22.51810803077989 46 22.430316081136027 30.05383468610237 26.577092776363937 20.93875645639767 47 22.215278509795656 28.276988871655096 25.931904769075548 23.5758278494737 48 21.80447844353758 26.258451669251738 29.03571912599575 22.901350761214932 49 21.714051229539056 25.933711807490173 29.425060611080156 22.927176351890612 50 20.895688707515774 31.43012031864111 26.462948183173463 21.211242790669658 51 20.47841342027196 31.086933606396915 25.170463957112954 23.26418901621817 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 719.0 1 1189.5 2 1660.0 3 4891.0 4 8122.0 5 6213.5 6 4305.0 7 4550.5 8 4796.0 9 5105.5 10 5415.0 11 5528.0 12 5641.0 13 5654.0 14 5667.0 15 5347.5 16 5028.0 17 4785.5 18 4543.0 19 4536.0 20 4529.0 21 4725.5 22 4922.0 23 4973.5 24 5025.0 25 5410.5 26 8309.0 27 10822.0 28 13452.0 29 16082.0 30 18494.0 31 20906.0 32 22650.5 33 24395.0 34 29839.0 35 35283.0 36 38428.5 37 41574.0 38 46188.5 39 50803.0 40 63760.0 41 76717.0 42 95119.5 43 113522.0 44 114109.0 45 114696.0 46 114356.5 47 114017.0 48 106676.5 49 99336.0 50 96694.5 51 94053.0 52 87360.0 53 80667.0 54 77833.0 55 74999.0 56 70659.0 57 66319.0 58 61044.5 59 55770.0 60 53093.5 61 50417.0 62 42998.5 63 35580.0 64 31526.5 65 27473.0 66 24781.5 67 22090.0 68 17502.5 69 12915.0 70 11331.0 71 9747.0 72 8122.0 73 6497.0 74 5079.0 75 2869.0 76 2077.0 77 1482.0 78 887.0 79 639.5 80 392.0 81 279.0 82 166.0 83 120.5 84 75.0 85 50.5 86 26.0 87 15.0 88 4.0 89 4.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1328140.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.866802435806378 #Duplication Level Percentage of deduplicated Percentage of total 1 78.41026983750355 14.793510699624473 2 7.505677867485748 2.8321628294531624 3 2.9282486946813795 1.6574006881638448 4 1.4820518987738023 1.1184632149510816 5 0.9762955560870548 0.9209787687825093 6 0.6645601212059418 0.7522874708104826 7 0.5324596213955025 0.7032067337339246 8 0.4035188279662298 0.6090488005093599 9 0.3497963190137911 0.5939584239244948 >10 4.184221713235615 18.112703739645045 >50 1.2368201766015134 16.855760694810968 >100 1.3204756500448118 40.06599905590666 >500 0.004803185147177248 0.5452348171602628 >1k 8.005308578628748E-4 0.4392840625237187 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4350 0.32752571265077474 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1467 0.11045522309395095 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024846778201093257 0.0 2 0.0 0.0 0.0 0.08222024786543587 0.0 3 0.0 0.0 0.0 0.11708103061424248 0.0 4 0.0 0.0 0.0 0.16805457256012168 0.0 5 0.0 0.0 0.0 0.28814733386540575 0.0 6 0.0 0.0 0.0 0.4207387775385125 0.0 7 0.0 0.0 0.0 0.5037872513439848 0.0 8 0.0 0.0 0.0 0.7304199858448658 0.0 9 0.0 0.0 0.0 0.8317647235984158 0.0 10 0.0 0.0 0.0 1.002831026849579 0.0 11 0.0 0.0 0.0 1.1555257728853885 0.0 12 0.0 0.0 0.0 1.2820184619091362 0.0 13 0.0 0.0 0.0 1.3445871670155254 0.0 14 0.0 0.0 0.0 1.366422214525577 0.0 15 0.0 0.0 0.0 1.4067794057855347 0.0 16 0.0 0.0 0.0 1.4797385817760176 0.0 17 7.529326727604018E-5 0.0 0.0 1.5681328775580887 0.0 18 7.529326727604018E-5 0.0 0.0 1.7069736624151068 0.0 19 7.529326727604018E-5 0.0 0.0 1.7641965455448974 0.0 20 7.529326727604018E-5 0.0 0.0 1.8277440631258752 0.0 21 7.529326727604018E-5 0.0 0.0 1.9077808062403059 0.0 22 7.529326727604018E-5 0.0 0.0 1.9891728281657055 0.0 23 7.529326727604018E-5 0.0 0.0 2.082084719984339 0.0 24 7.529326727604018E-5 0.0 0.0 2.155345069043926 0.0 25 7.529326727604018E-5 0.0 0.0 2.2145255771228936 0.0 26 7.529326727604018E-5 0.0 0.0 2.2760401764874185 0.0 27 7.529326727604018E-5 0.0 0.0 2.336425376842803 0.0 28 7.529326727604018E-5 0.0 0.0 2.4001234809583325 0.0 29 7.529326727604018E-5 0.0 0.0 2.4685650609122534 0.0 30 1.5058653455208036E-4 0.0 0.0 2.5549264384778714 0.0 31 1.5058653455208036E-4 0.0 0.0 2.6358667007996144 0.0 32 1.5058653455208036E-4 0.0 0.0 2.706416492237264 0.0 33 1.5058653455208036E-4 0.0 0.0 2.7841191440661377 0.0 34 1.5058653455208036E-4 0.0 0.0 2.865360579456985 0.0 35 1.5058653455208036E-4 0.0 0.0 2.9643712259249777 0.0 36 1.5058653455208036E-4 0.0 0.0 3.056680771605403 0.0 37 1.5058653455208036E-4 0.0 0.0 3.141084524221844 0.0 38 1.5058653455208036E-4 0.0 0.0 3.2259400364419415 0.0 39 1.5058653455208036E-4 0.0 0.0 3.3107955486620386 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGAATA 30 2.165758E-6 45.000004 32 GCGCTAA 30 2.165758E-6 45.000004 22 TACAACG 30 2.165758E-6 45.000004 33 CGTGCTA 20 7.033684E-4 45.0 24 CAACGAT 20 7.033684E-4 45.0 21 CGCATCG 40 6.8157533E-9 45.0 21 CGATTCA 50 2.1827873E-11 45.0 10 CGCGAAA 25 3.8911352E-5 45.0 24 ACTTACG 20 7.033684E-4 45.0 1 ATCGTAG 50 2.1827873E-11 45.0 1 GCTTAAC 20 7.033684E-4 45.0 11 GCGATTC 180 0.0 45.0 9 CGTACGA 25 3.8911352E-5 45.0 25 TCCGTCG 20 7.033684E-4 45.0 16 CATCCGA 25 3.8911352E-5 45.0 36 GTGCGAT 25 3.8911352E-5 45.0 18 CTTACCG 25 3.8911352E-5 45.0 1 CTCACGA 530 0.0 42.45283 24 CGTTTTT 3875 0.0 42.329033 1 CGGTCTA 525 0.0 42.0 31 >>END_MODULE