SRR1545192_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545192_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1097465
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6353	0.5788795086859262	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3465	0.315727608625332	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGGTA	20	7.033146E-4	45.000004	12
CGTGCCG	40	6.8139343E-9	45.000004	41
TAGCGCT	20	7.033146E-4	45.000004	30
TAGCGCG	40	6.8139343E-9	45.000004	1
ACGATTC	20	7.033146E-4	45.000004	35
CTAACGG	40	6.8139343E-9	45.000004	2
CCTCCGT	20	7.033146E-4	45.000004	38
TCTACGA	40	6.8139343E-9	45.000004	13
CCATCCG	20	7.033146E-4	45.000004	30
CTACGTC	20	7.033146E-4	45.000004	32
CGGATCT	20	7.033146E-4	45.000004	15
GGGCGTA	40	6.8139343E-9	45.000004	7
GTATGAC	40	6.8139343E-9	45.000004	16
TACGACT	20	7.033146E-4	45.000004	40
TATTCGA	20	7.033146E-4	45.000004	13
TCGCTGA	20	7.033146E-4	45.000004	36
TCGCTAA	40	6.8139343E-9	45.000004	43
AGCGCGA	20	7.033146E-4	45.000004	31
AGCGATC	20	7.033146E-4	45.000004	39
AACGACC	20	7.033146E-4	45.000004	31