##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545191_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2400469 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.98948913733108 31.0 31.0 33.0 28.0 34.0 2 31.281094236168016 31.0 31.0 34.0 28.0 34.0 3 31.384382801860802 31.0 31.0 34.0 28.0 34.0 4 35.18002856941706 37.0 35.0 37.0 32.0 37.0 5 35.035353924587234 37.0 35.0 37.0 32.0 37.0 6 35.09071727233303 37.0 35.0 37.0 32.0 37.0 7 35.70488558694155 37.0 35.0 37.0 35.0 37.0 8 35.69640974326267 37.0 35.0 37.0 35.0 37.0 9 37.37910716614128 39.0 37.0 39.0 35.0 39.0 10 36.54103094020377 39.0 35.0 39.0 32.0 39.0 11 36.252023250456475 38.0 35.0 39.0 31.0 39.0 12 35.76945005330209 37.0 35.0 39.0 30.0 39.0 13 35.5798050297671 37.0 35.0 39.0 30.0 39.0 14 36.517607184262744 38.0 35.0 40.0 30.0 41.0 15 36.72192975622681 38.0 35.0 40.0 31.0 41.0 16 36.7782645807965 38.0 35.0 41.0 31.0 41.0 17 36.69147112501765 38.0 35.0 40.0 31.0 41.0 18 36.58716609129299 38.0 35.0 40.0 31.0 41.0 19 36.513810426212544 38.0 35.0 40.0 30.0 41.0 20 36.38724099332256 38.0 35.0 40.0 30.0 41.0 21 36.29123100527438 38.0 35.0 40.0 30.0 41.0 22 36.20146063123498 38.0 34.0 40.0 30.0 41.0 23 36.12959967406369 38.0 34.0 40.0 30.0 41.0 24 36.055437499921894 38.0 34.0 40.0 30.0 41.0 25 35.935480941432694 38.0 34.0 40.0 30.0 41.0 26 35.80104762860924 38.0 34.0 40.0 29.0 41.0 27 35.68070156290292 38.0 34.0 40.0 29.0 41.0 28 35.65796225654237 38.0 34.0 40.0 29.0 41.0 29 35.602822198495375 37.0 34.0 40.0 29.0 41.0 30 35.484122894317736 37.0 34.0 40.0 28.0 41.0 31 35.34651353547994 37.0 34.0 40.0 27.0 41.0 32 35.193387208916256 37.0 34.0 40.0 27.0 41.0 33 34.97959648718646 37.0 33.0 40.0 25.0 41.0 34 34.74895197563476 37.0 33.0 40.0 25.0 41.0 35 34.56862971361013 37.0 33.0 40.0 24.0 41.0 36 34.43136112151417 37.0 33.0 40.0 23.0 41.0 37 34.385037257302635 37.0 33.0 40.0 23.0 41.0 38 34.30700375634928 37.0 33.0 40.0 23.0 41.0 39 34.23439419546764 37.0 33.0 40.0 23.0 41.0 40 34.07995729167925 37.0 33.0 40.0 23.0 41.0 41 33.98085832393586 36.0 33.0 40.0 23.0 41.0 42 33.90611626311358 36.0 33.0 40.0 23.0 41.0 43 33.85068417880006 36.0 33.0 40.0 23.0 41.0 44 33.730376022352296 36.0 32.0 40.0 23.0 41.0 45 33.661043737702926 36.0 32.0 40.0 23.0 41.0 46 33.59292121664558 35.0 32.0 40.0 23.0 41.0 47 33.482648182501 35.0 32.0 40.0 22.0 41.0 48 33.3993169668094 35.0 32.0 39.0 22.0 41.0 49 33.351120968444086 35.0 32.0 39.0 22.0 41.0 50 33.30851554425406 35.0 32.0 39.0 22.0 41.0 51 33.14538825537843 35.0 32.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 6.0 13 6.0 14 22.0 15 104.0 16 361.0 17 841.0 18 1873.0 19 3637.0 20 5966.0 21 9200.0 22 13558.0 23 19051.0 24 26286.0 25 36117.0 26 46638.0 27 53837.0 28 58983.0 29 66964.0 30 78352.0 31 92561.0 32 112065.0 33 139102.0 34 200088.0 35 249483.0 36 202633.0 37 241858.0 38 317891.0 39 422798.0 40 187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.11670802663979 22.671819548596545 28.272308453056468 14.939163971707195 2 32.60187904946908 25.02885894381473 29.082650098793195 13.286611907922993 3 28.997958315645818 24.69325785919335 32.72006428743716 13.58871953772367 4 26.367722307599056 27.484545728355585 31.2162331611031 14.931498802942258 5 22.75521991744113 31.27438846325447 31.18719716855331 14.783194450751083 6 19.871825047521963 41.384329478947656 28.466645476363162 10.277199997167221 7 86.66981327398938 3.763056302747505 7.866629396172165 1.700501027090956 8 87.40729415793331 3.1010606677278485 7.717033629678201 1.7746115446606476 9 82.84243620725783 5.044597534898389 9.1267581460123 2.9862081118314796 10 40.22205660643816 30.62030794815513 15.897143433220759 13.260492012185951 11 34.079465304488416 24.17365106568758 25.441070057559585 16.30581357226442 12 32.239324898592734 21.634938839035208 28.628905434729628 17.49683082764243 13 24.57578081616551 28.191740863972832 28.892145659868966 18.340332659992693 14 19.92827235011158 30.303161590505855 30.7594474246491 19.00911863473346 15 18.57257894186511 23.617259793815293 38.19028698141905 19.619874282900547 16 21.788992067800084 21.116790093935812 35.7368497572766 21.357368080987506 17 21.623482744413696 21.868684827839893 30.216386881063663 26.291445546682752 18 23.377098392022557 23.142644208277634 32.63433104114238 20.84592635855743 19 27.099079388236213 25.166207103695154 26.52048412206115 21.214229386007485 20 28.493515225566334 24.98595066214144 26.817176143495292 19.70335796879693 21 24.868182009432324 26.414088246921747 28.963215105048224 19.754514638597705 22 24.26571640791862 23.43087954895481 28.2638101137736 24.03959392935297 23 21.783701435011242 26.939735526682497 28.116213956522664 23.1603490817836 24 21.507088823059163 24.284837671305066 33.772233676002486 20.43583982963329 25 22.04035961305895 25.046063915009942 31.070011735206744 21.843564736724367 26 20.72011761035031 27.793943600188133 27.835977052817597 23.649961736643967 27 20.100363720589602 27.160942299192364 30.09053647433064 22.648157505887394 28 19.68486158329893 26.185882842061282 32.534767164249985 21.594488410389804 29 20.830304411346283 24.99557378162351 31.767667068393717 22.40645473863649 30 22.537679095210144 27.036175014132656 30.619558094688998 19.806587795968206 31 26.36597264951141 25.407784895368362 27.3617780525389 20.86446440258133 32 26.909199827200435 25.346838471981936 26.6737041803081 21.070257520509532 33 26.930112407200426 25.615827573694972 26.736983481144726 20.717076537959876 34 21.826693033736326 26.504778857798208 28.875357273932718 22.793170834532752 35 21.740376568078986 26.26986643026842 29.830503955685327 22.15925304596727 36 26.25724389692181 27.600689698554742 25.574294023376265 20.567772381147183 37 22.04035961305895 30.427345656203013 26.432876242101024 21.099418488637014 38 22.826705947879354 29.634292298713294 26.070155457121086 21.468846296286266 39 22.733265874293732 28.611825439112103 25.829202543336322 22.825706143257836 40 24.57715554752009 26.55664372253922 26.5337315332962 22.33246919664449 41 20.819889779872184 25.15695891094615 28.261560553375194 25.76159075580647 42 21.994951819831872 26.803803756682548 25.541967007280657 25.65927741620492 43 21.53916588799939 26.35776591990982 27.04575647508883 25.05731171700197 44 22.338634658477154 26.35201704333611 28.114714249590396 23.19463404859634 45 20.941865943696836 29.601965282617687 26.476742669869928 22.979426103815545 46 22.218366494214255 29.07506824708005 26.908824900467366 21.797740358238325 47 20.852924990908026 28.1771187213832 27.889799868275738 23.080156419433035 48 21.722338426365848 26.414879758913777 29.351139298195477 22.511642516524898 49 22.078477164254153 25.795542454412036 29.609547134330832 22.516433247002983 50 21.531917304493415 27.775405556164234 28.09984215584538 22.592834983496974 51 20.785938081266618 28.361957600785516 27.581276825487016 23.27082749246085 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1136.0 1 2216.0 2 3296.0 3 16264.5 4 29233.0 5 20823.5 6 12414.0 7 12553.0 8 12692.0 9 13114.0 10 13536.0 11 13698.5 12 13861.0 13 13353.0 14 12845.0 15 12265.0 16 11685.0 17 11387.0 18 11089.0 19 10479.5 20 9870.0 21 9963.0 22 10056.0 23 10823.0 24 11590.0 25 13093.5 26 17641.5 27 20686.0 28 23646.0 29 26606.0 30 32290.5 31 37975.0 32 43907.5 33 49840.0 34 59861.5 35 69883.0 36 76636.0 37 83389.0 38 90289.0 39 97189.0 40 112874.5 41 128560.0 42 142704.0 43 156848.0 44 161831.5 45 166815.0 46 169329.5 47 171844.0 48 168383.0 49 164922.0 50 161860.0 51 158798.0 52 153596.0 53 148394.0 54 141054.5 55 133715.0 56 128334.0 57 122953.0 58 117995.0 59 113037.0 60 108376.0 61 103715.0 62 93589.5 63 83464.0 64 72160.0 65 60856.0 66 52791.0 67 44726.0 68 37569.5 69 30413.0 70 25882.0 71 21351.0 72 18882.5 73 16414.0 74 13041.0 75 7634.5 76 5601.0 77 4044.5 78 2488.0 79 1797.5 80 1107.0 81 961.5 82 816.0 83 563.5 84 311.0 85 208.0 86 105.0 87 76.5 88 48.0 89 31.0 90 14.0 91 14.5 92 15.0 93 9.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2400469.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.022489511846768 #Duplication Level Percentage of deduplicated Percentage of total 1 77.41016040478395 15.499441248151626 2 6.829954667298263 2.7350539138473677 3 2.886314876782646 1.733736280448035 4 1.6990090686243093 1.3607356502825114 5 1.131871521785968 1.1331442836858794 6 0.8683811498318486 1.0432291478876174 7 0.6891626252844107 0.9659126005699727 8 0.5421610594328734 0.8684331300981153 9 0.47838588398081566 0.8620628710159286 >10 5.268549343757707 24.16007205094271 >50 1.2568380817316056 17.849319711456886 >100 0.9335685277062732 30.111568406065608 >500 0.0037618593328683243 0.5015175786740145 >1k 0.0016719374812748109 0.4561152780598045 >5k 0.0 0.0 >10k+ 2.0899218515935136E-4 0.7196578488139924 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17198 0.7164433283662485 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.1658525896397746E-5 0.0 0.0 0.016371800677284314 0.0 2 4.1658525896397746E-5 0.0 0.0 0.054905937131452226 0.0 3 4.1658525896397746E-5 0.0 0.0 0.08552495366530458 0.0 4 4.1658525896397746E-5 0.0 0.0 0.1219345052987562 0.0 5 4.1658525896397746E-5 0.0 0.0 0.20637633729075444 0.0 6 4.1658525896397746E-5 0.0 0.0 0.34630732577675444 0.0 7 4.1658525896397746E-5 0.0 0.0 0.44324671553767203 0.0 8 4.1658525896397746E-5 0.0 0.0 0.7016545516730273 0.0 9 4.1658525896397746E-5 0.0 0.0 0.8460846609558382 0.0 10 4.1658525896397746E-5 0.0 0.0 1.066749872629057 0.0 11 4.1658525896397746E-5 0.0 0.0 1.2056810564935436 0.0 12 4.1658525896397746E-5 0.0 0.0 1.34357077721062 0.0 13 8.331705179279549E-5 0.0 0.0 1.4063501757364916 0.0 14 8.331705179279549E-5 0.0 0.0 1.4365526070113799 0.0 15 8.331705179279549E-5 0.0 0.0 1.4662551359755114 0.0 16 8.331705179279549E-5 0.0 0.0 1.5229107311946124 0.0 17 8.331705179279549E-5 0.0 0.0 1.586023397927655 0.0 18 8.331705179279549E-5 0.0 0.0 1.6915027854973341 0.0 19 8.331705179279549E-5 0.0 0.0 1.736743944620822 0.0 20 8.331705179279549E-5 0.0 0.0 1.7923997352184093 0.0 21 8.331705179279549E-5 0.0 0.0 1.851429866413605 0.0 22 8.331705179279549E-5 0.0 0.0 1.9156673133458504 0.0 23 8.331705179279549E-5 0.0 0.0 1.9880281728278932 0.0 24 8.331705179279549E-5 0.0 0.0 2.0470166454971923 0.0 25 8.331705179279549E-5 0.0 0.0 2.0973818033059373 0.0 26 8.331705179279549E-5 0.0 0.0 2.1481218878477497 0.0 27 8.331705179279549E-5 0.0 0.0 2.210359725536968 0.0 28 1.2497557768919324E-4 0.0 0.0 2.2645574677281815 0.0 29 1.2497557768919324E-4 0.0 0.0 2.3345021327082334 0.0 30 1.6663410358559098E-4 0.0 0.0 2.4354823994811015 0.0 31 1.6663410358559098E-4 0.0 0.0 2.512842282070712 0.0 32 1.6663410358559098E-4 0.0 0.0 2.587619336054746 0.0 33 1.6663410358559098E-4 0.0 0.0 2.663312877608501 0.0 34 1.6663410358559098E-4 0.0 0.0 2.7451718809949224 0.0 35 1.6663410358559098E-4 0.0 0.0 2.8481100984849212 0.0 36 2.0829262948198873E-4 0.0 0.0 2.9309689064928564 0.0 37 2.0829262948198873E-4 0.0 0.0 3.0147025435446158 0.0 38 2.0829262948198873E-4 0.0 0.0 3.130138318803534 0.0 39 2.0829262948198873E-4 0.0 0.0 3.321934172030549 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGCGA 20 7.034824E-4 45.0 12 CGTTTTT 10960 0.0 42.96761 1 TCACGAC 550 0.0 40.909092 25 ACGGGTA 205 0.0 40.609753 5 ACATACG 750 0.0 40.199997 17 CGGTCTA 570 0.0 39.473686 31 TCGACGG 75 0.0 39.0 2 GGGTACC 1235 0.0 38.98785 7 GTAGGGC 1240 0.0 38.830643 4 CATACGA 780 0.0 38.653847 18 CGTACGT 35 6.2511335E-6 38.571426 21 ACGTCGT 35 6.2511335E-6 38.571426 45 CGTTAGG 270 0.0 38.333332 2 AAGGGAT 3080 0.0 38.133118 5 AGGGATG 4450 0.0 37.820225 6 AGGGTAT 1370 0.0 37.77372 6 TATGGGA 2265 0.0 37.748344 4 GACCGAT 990 0.0 37.727272 9 GTTGATC 1170 0.0 37.692307 16 TTAGGGA 2490 0.0 37.590363 4 >>END_MODULE