##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545190_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1730441 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07105876478886 31.0 31.0 33.0 30.0 34.0 2 31.351287908689173 31.0 31.0 34.0 30.0 34.0 3 31.469338162930722 31.0 31.0 34.0 30.0 34.0 4 35.24963405282237 37.0 35.0 37.0 33.0 37.0 5 35.10151458501041 37.0 35.0 37.0 32.0 37.0 6 35.15156541020468 37.0 35.0 37.0 32.0 37.0 7 35.754250506084865 37.0 35.0 37.0 35.0 37.0 8 35.751363958667184 37.0 35.0 37.0 35.0 37.0 9 37.44815454557538 39.0 37.0 39.0 35.0 39.0 10 36.635940202526406 39.0 35.0 39.0 32.0 39.0 11 36.328516256838576 38.0 35.0 39.0 32.0 39.0 12 35.582505846775476 37.0 35.0 39.0 30.0 39.0 13 35.248703654155214 37.0 35.0 39.0 30.0 39.0 14 36.13155085900068 38.0 35.0 40.0 30.0 41.0 15 36.45960769537938 38.0 35.0 40.0 30.0 41.0 16 36.60096472517699 38.0 35.0 40.0 31.0 41.0 17 36.55437544533446 38.0 35.0 40.0 31.0 41.0 18 36.50807279762789 38.0 35.0 40.0 31.0 41.0 19 36.444324308081 38.0 35.0 40.0 31.0 41.0 20 36.31114091725751 38.0 35.0 40.0 30.0 41.0 21 36.17533449565747 38.0 34.0 40.0 30.0 41.0 22 36.08958352235066 38.0 34.0 40.0 30.0 41.0 23 36.03438834378058 38.0 34.0 40.0 30.0 41.0 24 35.98223343066883 37.0 34.0 40.0 30.0 41.0 25 35.872129705664626 37.0 34.0 40.0 30.0 41.0 26 35.73498200747671 37.0 34.0 40.0 30.0 41.0 27 35.61779800640415 37.0 34.0 40.0 29.0 41.0 28 35.633402699080754 37.0 34.0 40.0 29.0 41.0 29 35.603356023117804 37.0 34.0 40.0 29.0 41.0 30 35.54009758206145 37.0 34.0 40.0 29.0 41.0 31 35.367567573815 37.0 34.0 40.0 29.0 41.0 32 35.263640309031054 37.0 34.0 40.0 28.0 41.0 33 35.07354194682165 37.0 34.0 40.0 27.0 41.0 34 34.90156902200075 37.0 34.0 40.0 26.0 41.0 35 34.759473452143126 37.0 33.0 40.0 26.0 41.0 36 34.569921193499226 36.0 33.0 40.0 24.0 41.0 37 34.50471816143977 36.0 33.0 40.0 24.0 41.0 38 34.43760925683106 36.0 33.0 40.0 24.0 41.0 39 34.37640867270251 36.0 33.0 40.0 24.0 41.0 40 34.21906438878875 36.0 33.0 40.0 23.0 41.0 41 34.158292597089414 36.0 33.0 40.0 23.0 41.0 42 34.09460247416699 36.0 33.0 40.0 23.0 41.0 43 34.049544017969986 35.0 33.0 40.0 23.0 41.0 44 33.91995508659353 35.0 33.0 40.0 23.0 41.0 45 33.861065474061235 35.0 33.0 40.0 23.0 41.0 46 33.815785109113804 35.0 33.0 39.0 23.0 41.0 47 33.72418302617656 35.0 33.0 39.0 23.0 41.0 48 33.637984768044674 35.0 32.0 39.0 23.0 41.0 49 33.59107533859866 35.0 32.0 39.0 24.0 41.0 50 33.5196669519504 35.0 32.0 39.0 23.0 41.0 51 33.32930854042409 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 4.0 14 22.0 15 50.0 16 192.0 17 527.0 18 1062.0 19 2044.0 20 3694.0 21 5806.0 22 8605.0 23 12205.0 24 17135.0 25 23203.0 26 29955.0 27 35600.0 28 40738.0 29 46883.0 30 55397.0 31 67361.0 32 83015.0 33 105101.0 34 160666.0 35 213954.0 36 137275.0 37 167127.0 38 217686.0 39 294935.0 40 198.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.25250615305578 24.32628445581213 29.326859453746184 13.094349937385905 2 30.269567121907077 26.12218503838039 30.811683264555107 12.796564575157433 3 28.77439912715892 24.954563605462425 32.70310862953432 13.567928637844343 4 26.501683674855137 27.710392899844607 30.98608967309489 14.801833752205361 5 23.12780383728772 33.052325967773534 29.668679833637785 14.151190361300964 6 20.355504752834683 41.99865814552475 27.272180906485687 10.373656195154876 7 88.39943112767207 4.044229187819752 5.999164374861668 1.5571753096465004 8 89.50897487981388 3.225593938192634 5.706002111600453 1.5594290703930385 9 84.99272728743713 5.210810423470087 7.076173068021389 2.7202892210713916 10 45.26666901674197 30.302159969626242 12.743225570822696 11.687945442809088 11 41.3296957249626 22.569102327094654 21.561266752232523 14.539935195710227 12 37.52251593668897 21.819813561976396 24.4871105111356 16.17055999019903 13 24.110443522778297 34.290449659942176 25.255353982019614 16.343752835259913 14 18.86339956115233 35.60208062569021 28.673211048513064 16.861308764644388 15 16.363054273448213 23.56451332348228 41.87851536111315 18.193917041956357 16 19.866438670835933 19.620489805777833 39.11222630531755 21.40084521806869 17 19.942084127687682 20.36608009172228 28.094976945183337 31.5968588354067 18 23.516375305485713 22.62041872563121 32.46929539926528 21.393910569617802 19 28.90199665865522 24.030232755696378 24.971958015326727 22.09581257032167 20 29.50334625682124 24.319985483469242 24.93173705431159 21.24493120539793 21 24.40320126487988 27.162093362327873 28.65385182158768 19.780853551204576 22 24.5481354175034 23.16080120616652 25.74268640190564 26.548376974424436 23 20.34591182247762 28.782027240454887 26.403038300641278 24.469022636426203 24 20.725526036426555 25.5742322332862 34.473408801571395 19.226832928715858 25 20.397286009751273 25.62086774411841 32.46507682145765 21.51676942467267 26 19.74236625230216 30.43987053011342 25.94067061517844 23.877092602405977 27 19.57269852020381 31.266538414196148 27.895490224746176 21.265272840853864 28 18.387798254895717 27.62313190683762 33.797569521295436 20.191500316971222 29 18.868253815067952 25.203286329900877 33.36120676752342 22.56725308750775 30 22.54303960666674 28.66870352701999 29.179093653005218 19.609163213308054 31 27.646767500307725 26.73220294711001 25.21490186605611 20.40612768652615 32 28.595485197126052 25.049857232925017 26.271684501234077 20.082973068714853 33 27.610533962151845 26.05977320232241 24.940231998663926 21.38946083686182 34 21.174775678569798 26.88459184681824 28.09081615611281 23.849816318499155 35 21.97370496884898 25.81035701303887 28.652811624320044 23.563126393792103 36 29.620772970589577 25.74031706368492 24.558710756391 20.0801992093345 37 21.69764817176662 31.069767764402258 26.960295092407083 20.272288971424047 38 21.800858856210642 30.89120056679193 24.36488733218873 22.94305324480869 39 21.74671080955664 29.424291264481134 25.722864865083523 23.1061330608787 40 24.71208206462977 24.9130135034942 26.045210440575552 24.329693991300484 41 20.899585712543796 23.011648475735377 27.802565935504305 28.28619987621653 42 21.756188162439514 25.45380050518914 25.492461170302832 27.29755016206851 43 21.46574196982157 25.682586115331297 27.162035573590774 25.68963634125636 44 21.372182004471693 27.2939094716318 28.68817833141956 22.645730192476947 45 19.28462166580658 32.85122116269783 24.404125884673327 23.46003128682226 46 22.230518116480134 30.061989978277214 26.5548493129786 21.152642592264055 47 21.99190842103256 27.292695908152893 27.245598087423957 23.46979758339059 48 22.00832042236632 27.132274373989056 28.97261449538008 21.88679070826454 49 22.601464019865457 25.471137126316357 29.710287724343097 22.217111129475086 50 22.239244215780833 29.67931296126248 26.61038428932278 21.47105853363391 51 20.057488235657846 30.83861281603938 25.6974956095007 23.406403338802072 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1010.0 1 1620.5 2 2231.0 3 6535.5 4 10840.0 5 8189.0 6 5538.0 7 5804.0 8 6070.0 9 6646.0 10 7222.0 11 7446.0 12 7670.0 13 7549.0 14 7428.0 15 6964.5 16 6501.0 17 6397.0 18 6293.0 19 6236.0 20 6179.0 21 6112.0 22 6045.0 23 6718.5 24 7392.0 25 7789.0 26 10895.0 27 13604.0 28 16785.0 29 19966.0 30 22277.5 31 24589.0 32 29642.0 33 34695.0 34 40024.0 35 45353.0 36 47878.5 37 50404.0 38 59226.5 39 68049.0 40 88603.5 41 109158.0 42 124739.5 43 140321.0 44 147041.5 45 153762.0 46 143766.0 47 133770.0 48 130871.5 49 127973.0 50 123250.0 51 118527.0 52 111293.5 53 104060.0 54 101095.0 55 98130.0 56 93329.0 57 88528.0 58 83230.0 59 77932.0 60 69408.0 61 60884.0 62 54315.5 63 47747.0 64 43871.0 65 39995.0 66 34400.0 67 28805.0 68 23910.5 69 19016.0 70 16643.0 71 14270.0 72 12053.0 73 9836.0 74 7949.0 75 4639.0 76 3216.0 77 2463.0 78 1710.0 79 1296.5 80 883.0 81 614.0 82 345.0 83 255.0 84 165.0 85 104.0 86 43.0 87 32.5 88 22.0 89 17.0 90 12.0 91 7.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1730441.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.790158035453526 #Duplication Level Percentage of deduplicated Percentage of total 1 79.53428968596654 14.14927582750886 2 7.041406941526139 2.5053548456337897 3 2.701031305231517 1.44155321336328 4 1.4086779810057546 1.002424156126239 5 0.8774737470728757 0.7805198316194019 6 0.6268877046238395 0.6691458801444489 7 0.4912727218618942 0.6117873552301352 8 0.3766357218747093 0.536032721115856 9 0.3542630934346886 0.5672156776498575 >10 3.9125104066440195 16.330330430508226 >50 1.2459466338671439 15.958007929868897 >100 1.417576919531735 43.45564707372512 >500 0.010076790760256379 1.149395099189967 >1k 0.001625288832299416 0.4907308719926576 >5k 3.250577664598832E-4 0.35257908632326573 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6097 0.35233793004211067 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3695 0.21352938355020484 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.7788737090718495E-5 0.0 0.0 0.02565819926827901 0.0 2 5.7788737090718495E-5 0.0 0.0 0.09182630323715169 0.0 3 5.7788737090718495E-5 0.0 0.0 0.1287533062381208 0.0 4 5.7788737090718495E-5 0.0 0.0 0.18209231057285397 0.0 5 1.1557747418143699E-4 0.0 0.0 0.29645622127538585 0.0 6 1.1557747418143699E-4 0.0 0.0 0.4190839213818905 0.0 7 1.1557747418143699E-4 0.0 0.0 0.5015484492103458 0.0 8 1.1557747418143699E-4 0.0 0.0 0.7038090290278606 0.0 9 1.1557747418143699E-4 0.0 0.0 0.7988137128050017 0.0 10 1.1557747418143699E-4 0.0 0.0 0.966458839105176 0.0 11 1.1557747418143699E-4 0.0 0.0 1.1108728930948817 0.0 12 1.7336621127215547E-4 0.0 0.0 1.2434980447180806 0.0 13 1.7336621127215547E-4 0.0 0.0 1.2989174435880795 0.0 14 1.7336621127215547E-4 0.0 0.0 1.320183698837464 0.0 15 1.7336621127215547E-4 0.0 0.0 1.351794138026087 0.0 16 1.7336621127215547E-4 0.0 0.0 1.420967256323677 0.0 17 1.7336621127215547E-4 0.0 0.0 1.5059166998470332 0.0 18 1.7336621127215547E-4 0.0 0.0 1.6458232323436628 0.0 19 1.7336621127215547E-4 0.0 0.0 1.700549166368573 0.0 20 1.7336621127215547E-4 0.0 0.0 1.7659082280181757 0.0 21 1.7336621127215547E-4 0.0 0.0 1.839588867808842 0.0 22 1.7336621127215547E-4 0.0 0.0 1.9140207611816873 0.0 23 1.7336621127215547E-4 0.0 0.0 2.0061360081042925 0.0 24 1.7336621127215547E-4 0.0 0.0 2.073748830500433 0.0 25 1.7336621127215547E-4 0.0 0.0 2.1288792856849788 0.0 26 1.7336621127215547E-4 0.0 0.0 2.188979572259326 0.0 27 1.7336621127215547E-4 0.0 0.0 2.25930846529873 0.0 28 1.7336621127215547E-4 0.0 0.0 2.32281828736143 0.0 29 1.7336621127215547E-4 0.0 0.0 2.403664730551345 0.0 30 1.7336621127215547E-4 0.0 0.0 2.502830203399018 0.0 31 1.7336621127215547E-4 0.0 0.0 2.5856414636500173 0.0 32 1.7336621127215547E-4 0.0 0.0 2.656201511637785 0.0 33 1.7336621127215547E-4 0.0 0.0 2.7390127718887842 0.0 34 1.7336621127215547E-4 0.0 0.0 2.825349145102318 0.0 35 1.7336621127215547E-4 0.0 0.0 2.9296578155510646 0.0 36 1.7336621127215547E-4 0.0 0.0 3.0131047519100624 0.0 37 1.7336621127215547E-4 0.0 0.0 3.105335576306849 0.0 38 1.7336621127215547E-4 0.0 0.0 3.2132271484552204 0.0 39 1.7336621127215547E-4 0.0 0.0 3.3857843174081057 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGAT 30 2.16614E-6 45.000004 43 CTATACG 20 7.034277E-4 45.0 1 ACTTACG 35 1.212411E-7 45.0 1 TACGAAC 100 0.0 45.0 34 CATACGT 20 7.034277E-4 45.0 23 CGTAAGA 20 7.034277E-4 45.0 21 CAATCGT 35 1.212411E-7 45.0 17 TACGTAA 20 7.034277E-4 45.0 32 TATCCGT 20 7.034277E-4 45.0 16 TATCCGC 20 7.034277E-4 45.0 29 CGGGTAT 170 0.0 43.676468 6 CGACGGT 550 0.0 42.545452 28 CGTTTTT 5110 0.0 42.181995 1 CACGCAT 75 0.0 42.0 32 ATGACGT 70 0.0 41.785713 40 ACGTAGG 330 0.0 41.590908 2 TCTCACG 575 0.0 41.086956 23 CGTTAGG 155 0.0 40.64516 2 CTCACGA 590 0.0 40.42373 24 TCGTACA 45 1.9292202E-8 40.0 34 >>END_MODULE