##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545187_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1458690 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.99556382781811 31.0 31.0 33.0 28.0 34.0 2 31.283758029464792 31.0 31.0 34.0 28.0 34.0 3 31.401195593306323 31.0 31.0 34.0 28.0 34.0 4 35.185848261111 37.0 35.0 37.0 32.0 37.0 5 35.03962322357732 37.0 35.0 37.0 32.0 37.0 6 35.07948913065833 37.0 35.0 37.0 32.0 37.0 7 35.70566878500573 37.0 35.0 37.0 35.0 37.0 8 35.705465177659406 37.0 35.0 37.0 35.0 37.0 9 37.394351095846275 39.0 37.0 39.0 35.0 39.0 10 36.5237569325902 39.0 35.0 39.0 32.0 39.0 11 36.24293715594129 38.0 35.0 39.0 31.0 39.0 12 35.613776059340914 37.0 35.0 39.0 30.0 39.0 13 35.32101268946795 37.0 35.0 39.0 30.0 39.0 14 36.20349423112519 38.0 35.0 40.0 30.0 41.0 15 36.45643899663396 38.0 35.0 40.0 30.0 41.0 16 36.58253775648013 38.0 35.0 40.0 31.0 41.0 17 36.50570443343 38.0 35.0 40.0 31.0 41.0 18 36.432702630442385 38.0 35.0 40.0 30.0 41.0 19 36.35542987200844 38.0 35.0 40.0 30.0 41.0 20 36.23688309373479 38.0 34.0 40.0 30.0 41.0 21 36.115106019784875 38.0 34.0 40.0 30.0 41.0 22 36.046543131165635 38.0 34.0 40.0 30.0 41.0 23 35.99944127950421 38.0 34.0 40.0 30.0 41.0 24 35.908409600394876 37.0 34.0 40.0 30.0 41.0 25 35.785000925487935 37.0 34.0 40.0 30.0 41.0 26 35.63507393620303 37.0 34.0 40.0 29.0 41.0 27 35.533853663218366 37.0 34.0 40.0 29.0 41.0 28 35.51621249203052 37.0 34.0 40.0 29.0 41.0 29 35.476343157216405 37.0 34.0 40.0 29.0 41.0 30 35.423202325374135 37.0 34.0 40.0 29.0 41.0 31 35.26765316825371 37.0 34.0 40.0 27.0 41.0 32 35.13053424648143 37.0 34.0 40.0 27.0 41.0 33 34.94190540827729 37.0 33.0 40.0 26.0 41.0 34 34.76324441793664 37.0 33.0 40.0 25.0 41.0 35 34.61491955110407 37.0 33.0 40.0 24.0 41.0 36 34.440854465307915 37.0 33.0 40.0 24.0 41.0 37 34.38521618712681 37.0 33.0 40.0 24.0 41.0 38 34.33560249264751 36.0 33.0 40.0 24.0 41.0 39 34.25976321219724 36.0 33.0 40.0 23.0 41.0 40 34.088353934009284 36.0 33.0 40.0 23.0 41.0 41 34.02161528494745 36.0 33.0 40.0 23.0 41.0 42 33.96372087283796 36.0 33.0 40.0 23.0 41.0 43 33.90443685772851 36.0 33.0 40.0 23.0 41.0 44 33.7843674804105 35.0 33.0 40.0 23.0 41.0 45 33.718925885554846 35.0 32.0 40.0 23.0 41.0 46 33.66134202606448 35.0 32.0 39.0 23.0 41.0 47 33.54737332812318 35.0 32.0 39.0 23.0 41.0 48 33.473562580123264 35.0 32.0 39.0 23.0 41.0 49 33.43322296032742 35.0 32.0 39.0 23.0 41.0 50 33.37716307097464 35.0 32.0 39.0 23.0 41.0 51 33.19791593827338 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 0.0 12 4.0 13 4.0 14 11.0 15 67.0 16 163.0 17 495.0 18 1045.0 19 2105.0 20 3480.0 21 5428.0 22 7922.0 23 11383.0 24 15367.0 25 21341.0 26 27272.0 27 32075.0 28 36024.0 29 40957.0 30 48339.0 31 57916.0 32 70189.0 33 87329.0 34 129696.0 35 168164.0 36 117438.0 37 142901.0 38 185813.0 39 245634.0 40 125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.01654223995503 24.274931616724597 28.76896393339229 13.939562209928086 2 30.82896297362702 25.018749700073357 30.67005326697242 13.482234059327206 3 28.853971714346432 25.145164496911615 32.03552502587939 13.96533876286257 4 25.587959059155818 27.36990039007603 32.10853574097307 14.93360480979509 5 22.822738210311993 32.58972091397075 30.741692888824907 13.845847986892348 6 19.892780508538483 41.46391625362483 27.89996503712235 10.743338200714339 7 87.4555251629887 4.065908452104285 6.808300598482201 1.6702657864248058 8 88.8204484845992 2.931671568325004 6.533396403622429 1.7144835434533725 9 84.67556506180203 4.622366644043628 7.929443541808061 2.7726247523462835 10 43.075156476016154 27.274060972516434 15.305856624779768 14.344925926687644 11 38.333641829312604 23.162837888790627 22.55558069226498 15.947939589631794 12 35.64527075663781 21.032775983930787 25.88815992431565 17.433793335115755 13 24.930039967367982 30.910268802829936 26.416647814134603 17.743043415667483 14 20.068006224763316 33.451590125386474 28.52004195545318 17.96036169439703 15 18.167054000507303 23.394895419863026 39.80160280799896 18.63644777163071 16 20.78289424072284 19.934873071043196 38.35804728900589 20.924185399228072 17 21.097423030253175 20.50668750728393 28.945834961506556 29.450054500956334 18 24.169220327828395 22.777697797338707 32.08090821216297 20.97217366266993 19 27.827228540676906 25.152979728386427 25.529139159108517 21.490652571828146 20 29.91992815471416 23.941001857831342 25.30044080647704 20.838629180977453 21 25.061733473184844 27.01581556053719 27.778280511966212 20.144170454311748 22 23.96492743489021 23.19279627611076 27.09362510197506 25.748651187023974 23 21.451096531819648 27.722545571711603 26.451610691785092 24.374747204683654 24 21.359027620673345 24.60234868272217 34.41444035401627 19.624183342588214 25 21.623237288251786 25.256154494786422 31.072811906573705 22.047796310388087 26 20.331941673693517 29.55871364032111 26.723909809486596 23.385434876498774 27 19.51333045403753 29.889832658069913 28.42481952985213 22.17201735804043 28 18.717136608875087 27.367158203593632 33.50766783895139 20.408037348579892 29 19.347016843880468 24.870465966038022 33.28088901685759 22.50162817322392 30 21.710644482378026 27.14325867730635 30.09597652688371 21.050120313431915 31 27.54800540210737 25.52516298870905 26.325812886905375 20.60101872227821 32 27.82757131398721 25.127545948762247 25.956646031713387 21.08823670553716 33 27.391700772611046 25.897689022341964 25.570546174992632 21.140064030054365 34 21.336061808883315 26.601676847033985 28.33521858653998 23.727042757542726 35 21.734021622140414 25.92504233250382 29.057647615326083 23.283288430029682 36 27.307104319629254 25.778472465019988 25.5283165031638 21.38610671218696 37 21.335170598276537 30.988078344267798 26.417059142106957 21.259691915348704 38 22.435747142984457 29.881880317270976 25.022520206486643 22.659852333257923 39 22.11744784704084 28.890442794562244 25.781763088798854 23.210346269598066 40 24.812400167273374 25.552721962857085 26.561709479053125 23.073168390816416 41 20.587307789866248 24.153041427582284 27.911824993658698 27.34782578889277 42 21.85789989648246 26.067773138912308 25.59152390158293 26.482803063022303 43 22.141579088085887 25.77881523833028 26.876375377907575 25.20323029567626 44 22.191281218079236 27.1607401161316 27.52572513693794 23.122253528851232 45 19.611226511458913 31.216228259602797 25.0771582721483 24.095386956789998 46 21.913360618088834 29.556519891135196 26.78547189601629 21.74464759475968 47 22.032440066086696 27.931500181669854 26.852381246186646 23.183678506056804 48 22.1031884773324 26.243821511081862 29.226017865344932 22.426972146240807 49 22.281019270715504 25.417463614613112 29.754162981853582 22.5473541328178 50 21.455004147557055 29.01733747403492 27.4985089361002 22.029149442307823 51 21.39131686650351 30.446565068657495 25.180812921182707 22.981305143656293 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 741.0 1 1196.5 2 1652.0 3 7507.0 4 13362.0 5 9605.5 6 5849.0 7 6014.0 8 6179.0 9 6588.0 10 6997.0 11 7166.0 12 7335.0 13 7069.0 14 6803.0 15 6403.0 16 6003.0 17 5672.0 18 5341.0 19 5499.0 20 5657.0 21 5498.5 22 5340.0 23 5752.5 24 6165.0 25 6493.5 26 9185.0 27 11548.0 28 13417.0 29 15286.0 30 18045.5 31 20805.0 32 25526.0 33 30247.0 34 35868.5 35 41490.0 36 41760.5 37 42031.0 38 48667.5 39 55304.0 40 67930.5 41 80557.0 42 91319.0 43 102081.0 44 108918.5 45 115756.0 46 111912.0 47 108068.0 48 108670.5 49 109273.0 50 104795.0 51 100317.0 52 97303.0 53 94289.0 54 89041.0 55 83793.0 56 81661.5 57 79530.0 58 73012.0 59 66494.0 60 62945.5 61 59397.0 62 52879.5 63 46362.0 64 40065.0 65 33768.0 66 29933.0 67 26098.0 68 22563.5 69 19029.0 70 16073.0 71 13117.0 72 11070.5 73 9024.0 74 7003.0 75 3940.0 76 2898.0 77 2220.5 78 1543.0 79 1156.0 80 769.0 81 503.5 82 238.0 83 234.0 84 230.0 85 165.0 86 100.0 87 55.0 88 10.0 89 7.5 90 5.0 91 4.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1458690.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.73428808059648 #Duplication Level Percentage of deduplicated Percentage of total 1 77.28155212044479 16.02377964980934 2 7.086828601583363 2.9388069160608037 3 2.813379712701472 1.7500027632977426 4 1.68975672508501 1.401436108961515 5 1.0809894329809724 1.1206773157754064 6 0.8271601113628291 1.02903456226651 7 0.6493229848439437 0.9424274877574977 8 0.552199163342112 0.9159565224479762 9 0.42774702479586296 0.7982127033961922 >10 5.376691587644396 25.841584202267633 >50 1.358307674443255 20.048937560695165 >100 0.8510954440107087 25.861817467457097 >500 0.003975533409156423 0.5564702126573409 >1k 6.625889015260705E-4 0.20490688116983677 >5k 3.3129445076303523E-4 0.5659496459799817 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8239 0.5648218607106377 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1936 0.13272182574775998 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.020977726590296772 0.0 2 0.0 0.0 0.0 0.0848706716300242 0.0 3 0.0 0.0 0.0 0.12127319718377448 0.0 4 0.0 0.0 0.0 0.16734193008795564 0.0 5 0.0 0.0 0.0 0.28820379929937134 0.0 6 0.0 0.0 0.0 0.43319690955583434 0.0 7 0.0 0.0 0.0 0.5336294894734317 0.0 8 0.0 0.0 0.0 0.7912579094941351 0.0 9 0.0 0.0 0.0 0.9078008349957839 0.0 10 0.0 0.0 0.0 1.1046212697694506 0.0 11 0.0 0.0 0.0 1.2569497288663116 0.0 12 0.0 0.0 0.0 1.39680123946829 0.0 13 0.0 0.0 0.0 1.4530160623573205 0.0 14 0.0 0.0 0.0 1.4796838258985803 0.0 15 0.0 0.0 0.0 1.513961156928477 0.0 16 0.0 0.0 0.0 1.5882058559392331 0.0 17 0.0 0.0 0.0 1.681440196340552 0.0 18 0.0 0.0 0.0 1.8158073339777472 0.0 19 0.0 0.0 0.0 1.872570594163256 0.0 20 0.0 0.0 0.0 1.9374918591338803 0.0 21 0.0 0.0 0.0 2.0172209311094202 0.0 22 0.0 0.0 0.0 2.0983896509882154 0.0 23 0.0 0.0 0.0 2.198068129623155 0.0 24 0.0 0.0 0.0 2.272381383295971 0.0 25 0.0 0.0 0.0 2.3373026482665953 0.0 26 0.0 0.0 0.0 2.4049660997196116 0.0 27 0.0 0.0 0.0 2.479759236026846 0.0 28 0.0 0.0 0.0 2.5539353803755422 0.0 29 0.0 0.0 0.0 2.6445646436185895 0.0 30 0.0 0.0 0.0 2.7519212444042256 0.0 31 0.0 0.0 0.0 2.8431674996058107 0.0 32 6.855466205979338E-5 0.0 0.0 2.9231707902295896 0.0 33 6.855466205979338E-5 0.0 0.0 3.0087955631422716 0.0 34 6.855466205979338E-5 0.0 0.0 3.104909199350102 0.0 35 6.855466205979338E-5 0.0 0.0 3.2211779062035113 0.0 36 6.855466205979338E-5 0.0 0.0 3.313863809308352 0.0 37 6.855466205979338E-5 0.0 0.0 3.4169700210462812 0.0 38 6.855466205979338E-5 0.0 0.0 3.545921340380753 0.0 39 6.855466205979338E-5 0.0 0.0 3.7469236095400666 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGAT 20 7.0339104E-4 45.000004 15 CGTCTTA 20 7.0339104E-4 45.000004 31 CATAGCG 40 6.8175723E-9 45.000004 1 TACCGGA 20 7.0339104E-4 45.000004 37 CTTAACG 45 3.8562575E-10 45.0 1 ATCACGC 45 3.8562575E-10 45.0 30 TACGCTA 25 3.8913247E-5 45.0 40 TACGAAC 25 3.8913247E-5 45.0 26 TCGAATT 25 3.8913247E-5 45.0 39 CGTTTTT 5540 0.0 42.88809 1 CGGTCTA 415 0.0 42.831326 31 CGACGGT 420 0.0 42.32143 28 TCGATAG 120 0.0 41.250004 1 ACGTTAG 55 6.184564E-11 40.909092 1 TCACGAC 435 0.0 40.34483 25 GCGACGT 145 0.0 40.344826 17 CGACGTC 145 0.0 40.344826 18 CTACGGG 355 0.0 39.929577 3 ACGGTCT 440 0.0 39.886364 30 TAATGCG 120 0.0 39.375004 1 >>END_MODULE