##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545186_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1607798 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.9826924775376 31.0 31.0 33.0 28.0 34.0 2 31.253763221499216 31.0 31.0 34.0 28.0 34.0 3 31.373733516275056 31.0 31.0 34.0 28.0 34.0 4 35.145143855136034 35.0 35.0 37.0 32.0 37.0 5 34.986736517895906 35.0 35.0 37.0 32.0 37.0 6 35.03752648031656 37.0 35.0 37.0 32.0 37.0 7 35.68480244408813 37.0 35.0 37.0 35.0 37.0 8 35.678190917018185 37.0 35.0 37.0 35.0 37.0 9 37.348719179896975 39.0 37.0 39.0 35.0 39.0 10 36.53499693369441 39.0 35.0 39.0 32.0 39.0 11 36.19825873648306 38.0 35.0 39.0 31.0 39.0 12 35.33594332123812 37.0 35.0 39.0 30.0 39.0 13 34.923024534176555 37.0 34.0 39.0 27.0 39.0 14 35.85331677238061 38.0 34.0 40.0 29.0 41.0 15 36.21605948010882 38.0 34.0 40.0 30.0 41.0 16 36.370739981017515 38.0 35.0 40.0 31.0 41.0 17 36.29934108638025 38.0 35.0 40.0 31.0 41.0 18 36.2589890023498 37.0 35.0 40.0 31.0 41.0 19 36.182431499479414 37.0 35.0 40.0 30.0 41.0 20 36.03671170134557 37.0 34.0 40.0 30.0 41.0 21 35.901343949924055 37.0 34.0 40.0 30.0 41.0 22 35.80699689886416 37.0 34.0 40.0 30.0 41.0 23 35.76121565022472 37.0 34.0 40.0 30.0 41.0 24 35.66018305782194 36.0 34.0 40.0 30.0 41.0 25 35.5713161728028 36.0 34.0 40.0 29.0 41.0 26 35.393437484062055 36.0 34.0 40.0 29.0 41.0 27 35.31304430034121 36.0 34.0 40.0 29.0 41.0 28 35.33874591211085 36.0 34.0 40.0 29.0 41.0 29 35.33608699600323 36.0 34.0 40.0 29.0 41.0 30 35.24461717205769 36.0 34.0 40.0 29.0 41.0 31 35.08740588058948 36.0 34.0 40.0 28.0 41.0 32 34.91276889260964 36.0 34.0 40.0 27.0 41.0 33 34.70742095711029 36.0 33.0 40.0 26.0 41.0 34 34.57034963347386 36.0 33.0 40.0 25.0 41.0 35 34.41382437345985 36.0 33.0 40.0 25.0 41.0 36 34.2099890657906 35.0 33.0 40.0 24.0 41.0 37 34.169109552319384 35.0 33.0 40.0 24.0 41.0 38 34.14585041155667 35.0 33.0 40.0 24.0 41.0 39 34.1045560449758 35.0 33.0 40.0 24.0 41.0 40 33.94221413386507 35.0 33.0 40.0 23.0 41.0 41 33.90692985064044 35.0 33.0 40.0 23.0 41.0 42 33.83622693895626 35.0 33.0 40.0 23.0 41.0 43 33.74181333724759 35.0 33.0 40.0 23.0 41.0 44 33.614691646587445 35.0 33.0 39.0 23.0 41.0 45 33.57117249803769 35.0 32.0 39.0 23.0 41.0 46 33.46269680643962 35.0 32.0 39.0 23.0 41.0 47 33.377345910369336 35.0 32.0 39.0 23.0 41.0 48 33.33262822817294 35.0 32.0 39.0 23.0 41.0 49 33.33764875935908 35.0 32.0 39.0 23.0 41.0 50 33.240641548254196 35.0 32.0 39.0 23.0 41.0 51 33.05103750595535 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 6.0 13 5.0 14 16.0 15 63.0 16 209.0 17 562.0 18 1284.0 19 2338.0 20 3933.0 21 6199.0 22 9139.0 23 12851.0 24 18023.0 25 23322.0 26 29707.0 27 34765.0 28 39444.0 29 45602.0 30 54767.0 31 66465.0 32 80659.0 33 101447.0 34 158784.0 35 221258.0 36 121392.0 37 141188.0 38 181725.0 39 252473.0 40 168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.873781407863426 23.657511702340717 29.967072978073116 13.50163391172274 2 29.251746799038187 26.74260074959665 30.778928696266572 13.226723755098588 3 28.561734745285168 26.319226669021855 31.644522508424565 13.474516077268413 4 24.794532646514053 28.376699062941984 31.857982159450376 14.970786131093583 5 22.56116750984887 32.06329402076629 30.513596857316656 14.861941612068183 6 19.35417260128449 42.63010651835616 27.31586928208643 10.699851598272918 7 86.5876807907461 4.934823902007591 6.643434063234312 1.8340612440119963 8 87.20063092502915 4.245682604406772 5.903913302541737 2.649773168022351 9 82.70230464274742 5.938183776817735 8.064881284838021 3.294630295596835 10 46.971261315165215 28.054768074098863 13.424820779724817 11.54914983101111 11 42.29666910893035 22.59873441812964 21.13095052985512 13.97364594308489 12 39.10049645540049 21.917740910238724 23.78389573814621 15.197866896214574 13 22.392116422585424 39.47106539503097 22.985287952839847 15.151530229543761 14 16.10202276654157 41.718113842659335 24.95033580089041 17.229527589908685 15 14.042373482240928 24.54114260622292 44.67283825455685 16.743645656979297 16 15.610916296698962 21.08218818533174 42.353890227503705 20.953005290465594 17 15.535969070741473 21.14612656565066 28.354494781060808 34.96340958254706 18 20.145876534241243 24.341117478688243 34.00663516187979 21.506370825190725 19 27.04263844089867 26.394173894979346 24.431240740441275 22.13194692368071 20 29.516767653648035 23.576780167657876 24.99480656152079 21.9116456171733 21 20.85541840455082 31.14638779249632 26.910034718291726 21.088159084661132 22 22.301495585888276 26.36338644531216 24.261878668837753 27.07323929996181 23 18.645377093391087 31.56204946143732 23.846279196764765 25.946294248406826 24 19.00213832832234 25.568448275218653 37.23770025836579 18.191713138093217 25 16.96550188518707 27.538969447654495 33.42913724236502 22.066391424793412 26 15.950573392926227 34.90320301430901 26.175365313304283 22.97085827946048 27 17.255401487002718 34.44157785990529 26.7518058860628 21.551214767029194 28 15.665960524891808 29.620076651420142 35.787953461815476 18.926009361872573 29 16.05382019383032 24.788375156580617 35.26929377944244 23.88851087014662 30 17.92414221189478 32.74030692910428 29.747020459037763 19.58853039996318 31 27.984920991318564 28.319913322444734 23.411336498739267 20.283829187497435 32 27.54593549687212 28.234641416396837 24.553768570429867 19.665654516301174 33 26.407421827866433 28.8001353403848 23.42844063744326 21.364002194305503 34 18.251173343915095 28.845228069695324 26.985106337985243 25.91849224840434 35 18.724367115769518 25.802806073897344 30.38298343448617 25.089843375846964 36 27.482681282101357 26.725185626552587 25.069256212534164 20.722876878811892 37 18.01053366156694 33.02417343472252 28.82333477215421 20.14195813155633 38 18.237552229819915 32.317430423473596 24.976458485456508 24.468558861249985 39 18.93546328581078 31.9180643339524 26.987718606441852 22.158753773794967 40 23.23401322802989 27.626107259742827 24.6091859798308 24.530693532396484 41 17.194386359480482 24.402008212474453 27.85306363112779 30.550541796917273 42 20.283393809421334 25.585303626450585 25.20229531321721 28.92900725091087 43 21.46177567082432 25.576036293116424 26.36089857059158 26.601289465467676 44 19.18704961692949 29.202673470174734 27.896103863793837 23.714173049101937 45 17.009475070873332 36.262142383558135 22.674738990843377 24.053643554725156 46 21.08411628824019 33.302815403427545 24.803613389244173 20.809454919088093 47 19.764734127048296 28.997299411990813 26.32911597103616 24.90885048992473 48 20.749497138322106 25.43130418124665 30.714617134739562 23.104581545691687 49 20.848887733409295 24.70963392167424 31.05999634282416 23.3814820020923 50 19.523348082283967 31.417752727643645 27.12063331338887 21.938265876683513 51 17.925697133595143 32.066901439111135 24.95238829753489 25.055013129758834 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1844.0 1 1985.5 2 2127.0 3 5908.5 4 9690.0 5 7455.5 6 5221.0 7 5875.5 8 6530.0 9 7253.0 10 7976.0 11 8562.0 12 9148.0 13 9261.5 14 9375.0 15 9050.5 16 8726.0 17 8562.0 18 8398.0 19 7670.0 20 6942.0 21 7206.0 22 7470.0 23 7506.5 24 7543.0 25 8543.5 26 11130.5 27 12717.0 28 14923.0 29 17129.0 30 21529.0 31 25929.0 32 30347.5 33 34766.0 34 38825.0 35 42884.0 36 45440.5 37 47997.0 38 56002.0 39 64007.0 40 85040.5 41 106074.0 42 123970.0 43 141866.0 44 150070.5 45 158275.0 46 155441.5 47 152608.0 48 149699.5 49 146791.0 50 132343.5 51 117896.0 52 106900.5 53 95905.0 54 86835.0 55 77765.0 56 71232.5 57 64700.0 58 56087.0 59 47474.0 60 43226.5 61 38979.0 62 37005.0 63 35031.0 64 31516.0 65 28001.0 66 22415.5 67 16830.0 68 14338.5 69 11847.0 70 9657.0 71 7467.0 72 6978.0 73 6489.0 74 5306.0 75 2833.0 76 1543.0 77 1416.0 78 1289.0 79 872.0 80 455.0 81 342.0 82 229.0 83 192.0 84 155.0 85 89.5 86 24.0 87 16.0 88 8.0 89 6.0 90 4.0 91 4.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1607798.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.085072668844724 #Duplication Level Percentage of deduplicated Percentage of total 1 79.75658889788929 16.01916883833281 2 8.264709987168871 3.3199460135842704 3 3.0009977301375224 1.8082577246655063 4 1.5129683839267207 1.21552319747331 5 0.9316137326088867 0.9355764759371582 6 0.624555012646816 0.7526539688821521 7 0.45290409607146853 0.6367628177129016 8 0.33780572127482267 0.5427881967805056 9 0.2988825594491968 0.5402770133388679 >10 2.769514074903354 12.686179810765614 >50 0.8290264582124436 11.950947922568863 >100 1.2095781571210913 47.27783906439183 >500 0.00899429911705255 1.2649318206021223 >1k 0.0012405929816624206 0.3515222231684121 >5k 6.202964908312103E-4 0.6976249117956843 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5685 0.3535891946625136 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5514 0.3429535302320316 No Hit GTCTGAGGGTCAAGAAGAAGGAGCTACTCCCCACCACCAGCACCCAAAGCT 1919 0.11935578971985286 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0889415212607554 0.0 2 0.0 0.0 0.0 0.30986479644831005 0.0 3 0.0 0.0 0.0 0.42760346759978557 0.0 4 0.0 0.0 0.0 0.6382020626969308 0.0 5 0.0 0.0 0.0 1.0596480403632795 0.0 6 0.0 0.0 0.0 1.52823924398463 0.0 7 0.0 0.0 0.0 1.8361137406564756 0.0 8 0.0 0.0 0.0 2.6557440673517445 0.0 9 0.0 0.0 0.0 3.0351449622402815 0.0 10 0.0 0.0 0.0 3.6755239153177204 0.0 11 0.0 0.0 0.0 4.10387374533368 0.0 12 0.0 0.0 0.0 4.535768796826467 0.0 13 0.0 0.0 0.0 4.69797822860832 0.0 14 0.0 0.0 0.0 4.758309190582399 0.0 15 0.0 0.0 0.0 4.843581096630298 0.0 16 0.0 0.0 0.0 5.036329190607278 0.0 17 0.0 0.0 0.0 5.257252465794832 0.0 18 0.0 0.0 0.0 5.627697011689279 0.0 19 6.219686801451426E-5 0.0 0.0 5.754889606778961 0.0 20 6.219686801451426E-5 0.0 0.0 5.88699575444179 0.0 21 6.219686801451426E-5 0.0 0.0 6.031852260047593 0.0 22 1.243937360290285E-4 0.0 0.0 6.171297638136134 0.0 23 1.243937360290285E-4 0.0 0.0 6.335372975958423 0.0 24 1.243937360290285E-4 0.0 0.0 6.458211790287089 0.0 25 1.243937360290285E-4 0.0 0.0 6.554927920049658 0.0 26 1.243937360290285E-4 0.0 0.0 6.652328215360387 0.0 27 1.243937360290285E-4 0.0 0.0 6.759990993893512 0.0 28 1.243937360290285E-4 0.0 0.0 6.868462331710824 0.0 29 1.243937360290285E-4 0.0 0.0 6.985454640446125 0.0 30 1.243937360290285E-4 0.0 0.0 7.154070349633474 0.0 31 1.243937360290285E-4 0.0 0.0 7.289908309377173 0.0 32 1.243937360290285E-4 0.0 0.0 7.40932629596504 0.0 33 1.243937360290285E-4 0.0 0.0 7.528308904476806 0.0 34 1.243937360290285E-4 0.0 0.0 7.649654993973123 0.0 35 1.243937360290285E-4 0.0 0.0 7.804587392197279 0.0 36 1.243937360290285E-4 0.0 0.0 7.923321213236986 0.0 37 1.243937360290285E-4 0.0 0.0 8.051384564478871 0.0 38 1.243937360290285E-4 0.0 0.0 8.177955190888408 0.0 39 1.243937360290285E-4 0.0 0.0 8.308568613718888 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTAAG 125 0.0 45.000004 1 TCGTTGC 35 1.2123382E-7 45.0 34 TAGCGAT 25 3.891503E-5 45.0 11 TGAACGT 40 6.8175723E-9 45.0 10 CGCGATA 20 7.034127E-4 45.0 11 CGTTCCA 20 7.034127E-4 45.0 33 AACGGTC 20 7.034127E-4 45.0 38 TCAATCG 35 1.2123382E-7 45.0 21 GTATCGC 25 3.891503E-5 45.0 9 GTATACG 50 2.1827873E-11 45.0 1 AGTAGTA 20 7.034127E-4 45.0 10 GTCCAAT 45 3.8562575E-10 45.0 36 TATACGT 50 2.1827873E-11 45.0 43 CAATCGA 35 1.2123382E-7 45.0 22 TAAGCGA 35 1.2123382E-7 45.0 45 GCCACTC 20 7.034127E-4 45.0 35 AATACGG 80 0.0 45.0 2 ATCGCCT 40 6.8175723E-9 45.0 27 TACACGG 75 0.0 45.0 2 ATTCTCG 25 3.891503E-5 45.0 30 >>END_MODULE