##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545185_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2099657 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.006873979892905 31.0 31.0 33.0 28.0 34.0 2 31.285193248230545 31.0 31.0 34.0 28.0 34.0 3 31.404679430973726 31.0 31.0 34.0 28.0 34.0 4 35.18303132368763 37.0 35.0 37.0 32.0 37.0 5 35.03855820260166 37.0 35.0 37.0 32.0 37.0 6 35.0947421412164 37.0 35.0 37.0 32.0 37.0 7 35.716465117874016 37.0 35.0 37.0 35.0 37.0 8 35.72128876287889 37.0 35.0 37.0 35.0 37.0 9 37.41533117075789 39.0 37.0 39.0 35.0 39.0 10 36.548417670124216 39.0 35.0 39.0 32.0 39.0 11 36.2718158251562 38.0 35.0 39.0 31.0 39.0 12 35.56411166204766 37.0 35.0 39.0 30.0 39.0 13 35.225906898126695 37.0 35.0 39.0 30.0 39.0 14 36.18746728632343 38.0 35.0 40.0 30.0 41.0 15 36.470133931399275 38.0 35.0 40.0 30.0 41.0 16 36.60022232202688 38.0 35.0 40.0 31.0 41.0 17 36.52360742730836 38.0 35.0 40.0 31.0 41.0 18 36.47081261367928 38.0 35.0 40.0 31.0 41.0 19 36.42614198414312 38.0 35.0 40.0 31.0 41.0 20 36.30743783389382 38.0 35.0 40.0 30.0 41.0 21 36.16602902283564 38.0 34.0 40.0 30.0 41.0 22 36.06833163702452 38.0 34.0 40.0 30.0 41.0 23 36.028520848881506 38.0 34.0 40.0 30.0 41.0 24 35.95772499984521 37.0 34.0 40.0 30.0 41.0 25 35.86242086207414 37.0 34.0 40.0 30.0 41.0 26 35.70027580695323 37.0 34.0 40.0 29.0 41.0 27 35.6164625936522 37.0 34.0 40.0 29.0 41.0 28 35.60869894463715 37.0 34.0 40.0 29.0 41.0 29 35.608136948082475 37.0 34.0 40.0 29.0 41.0 30 35.54699886695779 37.0 34.0 40.0 29.0 41.0 31 35.41517543103469 37.0 34.0 40.0 29.0 41.0 32 35.2996951406825 37.0 34.0 40.0 28.0 41.0 33 35.12889867249746 37.0 34.0 40.0 27.0 41.0 34 34.983253455207205 37.0 34.0 40.0 27.0 41.0 35 34.877267572751165 37.0 33.0 40.0 26.0 41.0 36 34.70543093467171 37.0 33.0 40.0 25.0 41.0 37 34.666990846600186 37.0 33.0 40.0 25.0 41.0 38 34.63731885731812 37.0 33.0 40.0 25.0 41.0 39 34.58870282146084 36.0 33.0 40.0 25.0 41.0 40 34.463875290106905 36.0 33.0 40.0 24.0 41.0 41 34.402962483872365 36.0 33.0 40.0 24.0 41.0 42 34.33501662414385 36.0 33.0 40.0 24.0 41.0 43 34.26856719930922 36.0 33.0 40.0 24.0 41.0 44 34.148316605998026 36.0 33.0 40.0 24.0 41.0 45 34.08754763278002 35.0 33.0 40.0 24.0 41.0 46 33.987758476741675 35.0 33.0 40.0 23.0 41.0 47 33.90212353732062 35.0 33.0 40.0 23.0 41.0 48 33.85507632913376 35.0 33.0 39.0 23.0 41.0 49 33.83247073212434 35.0 33.0 39.0 24.0 41.0 50 33.76747583057614 35.0 32.0 39.0 24.0 41.0 51 33.58673726232428 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 1.0 13 5.0 14 24.0 15 74.0 16 229.0 17 604.0 18 1358.0 19 2512.0 20 4238.0 21 6651.0 22 9889.0 23 14231.0 24 19903.0 25 27518.0 26 35549.0 27 42667.0 28 48538.0 29 56761.0 30 67681.0 31 81958.0 32 100553.0 33 126198.0 34 191115.0 35 258561.0 36 164975.0 37 199456.0 38 262344.0 39 375808.0 40 253.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.47937305950448 24.071741241545645 29.225059140612014 13.223826558337862 2 30.2477023628145 25.47473230151401 31.12551240512141 13.152052930550084 3 28.473269681667052 25.80778670039916 31.735612054730844 13.983331563202942 4 26.098643730856992 28.602719396549052 30.68110648548787 14.617530387106084 5 22.77100497843219 32.42177174652812 30.435256806230733 14.371966468808953 6 19.598724934596458 42.853523218316134 27.07275521668539 10.474996630402012 7 88.51845801480908 4.173110179424544 5.689453086861331 1.6189787189050402 8 89.51223938005111 3.1909973867160204 5.4263624963505945 1.8704007368822624 9 85.03655597080856 5.427124525577272 6.959851061387646 2.576468442226516 10 42.95430158354436 32.03408937745546 13.106569311082714 11.905039727917464 11 39.0620468009775 22.289545387651412 23.411776304415437 15.23663150695566 12 37.5367976769539 20.98404644187122 25.40543526871294 16.07372061246194 13 23.197407957585455 35.51237178262926 25.350473910738753 15.939746349046535 14 18.158727830307523 36.58835705069923 26.867150205962208 18.385764913031032 15 15.790340993790892 23.99544306522446 41.2996979982921 18.914517942692544 16 18.104004606466674 20.659660125439537 39.720821067441015 21.515514200652774 17 17.852439708009452 21.115210722513247 28.98206707095492 32.05028249852238 18 21.48203254150559 23.482549768843196 33.48699335177127 21.548424337879947 19 27.08890071092564 26.773515864734097 24.1509922811202 21.98659114322006 20 29.257493009572517 23.93133735653014 25.72253468066451 21.088634953232837 21 22.501770527281362 28.5149907818277 27.681616568801477 21.301622122089466 22 22.93045959411466 24.704273126515425 24.712036299262213 27.6532309801077 23 20.01345934121621 29.225440155225353 25.486972395967534 25.274128107590904 24 20.19334586553899 24.262058040908588 36.43280783480349 19.11178825874893 25 19.362972142592813 25.780020260452062 31.958934244974298 22.898073351980823 26 18.004559792385137 32.67547985218538 25.80359553965243 23.516364815777052 27 18.504260457779534 31.96750707377443 27.86040767611091 21.66782479233513 28 17.019922777863243 28.440502424919877 34.55673950554781 19.98283529166907 29 17.974888279371346 24.232481781548127 34.050132950286645 23.742496988793885 30 20.1315262445247 29.98599295027712 29.512439412723126 20.37004139247506 31 26.937685536256634 27.21930296234099 24.9418833647591 20.901128136643273 32 27.355134671996428 26.569292031984272 25.33737653340522 20.738196762614084 33 26.3383971763007 27.321319625062568 24.245150517441658 22.09513268119507 34 18.962716291279957 27.331083124529385 27.53716440351924 26.169036180671412 35 20.386329767195306 25.300513369564648 30.90390478063798 23.409252082602062 36 26.857958228415402 26.141888889470994 26.22599786536563 20.774155016747976 37 19.46279797128769 32.49083064519586 27.404571318077192 20.64180006543926 38 19.615870592196725 31.430228842139453 26.195754830431827 22.758145735231995 39 20.499014839090385 31.46566320118 25.913041987334122 22.122279972395493 40 23.853419868102264 26.39469208542157 25.869653948240117 23.882234098236047 41 18.900420401998993 24.25319945114845 28.002240365926433 28.84413978092612 42 20.25664191817997 26.104168442750407 25.339186352818576 28.30000328625104 43 20.48958472741024 26.697789210332928 26.18413388472498 26.628492177531854 44 20.546594038931122 27.79820704048328 28.124546056808324 23.530652863777274 45 19.048063564667945 33.45827437529082 24.064216202932194 23.42944585710904 46 21.095350335792943 31.940407409400677 26.257812585579455 20.706429669226925 47 19.57376847742274 28.35396448086521 27.67923522746811 24.393031814243944 48 20.311317515194148 26.013153576989 30.72106539306182 22.95446351475503 49 20.690855696906684 25.293226465084533 31.133751846134867 22.882165991873908 50 19.95087769097524 30.17959600068011 28.468506999000315 21.401019309344335 51 19.015820203014112 30.822653414343392 26.42550664227538 23.736019740367116 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1216.0 1 1937.0 2 2658.0 3 8002.0 4 13346.0 5 10019.0 6 6692.0 7 7086.5 8 7481.0 9 7824.0 10 8167.0 11 8435.5 12 8704.0 13 8642.0 14 8580.0 15 8057.0 16 7534.0 17 7110.5 18 6687.0 19 6990.5 20 7294.0 21 7247.5 22 7201.0 23 7274.0 24 7347.0 25 9874.5 26 16480.5 27 20559.0 28 23669.5 29 26780.0 30 30497.5 31 34215.0 32 40719.0 33 47223.0 34 53457.5 35 59692.0 36 64926.5 37 70161.0 38 79597.5 39 89034.0 40 112273.5 41 135513.0 42 158396.0 43 181279.0 44 184045.5 45 186812.0 46 184233.0 47 181654.0 48 172194.5 49 162735.0 50 155231.0 51 147727.0 52 139749.0 53 131771.0 54 120286.5 55 108802.0 56 101814.0 57 94826.0 58 89675.0 59 84524.0 60 74751.0 61 64978.0 62 58155.5 63 51333.0 64 44490.0 65 37647.0 66 31846.5 67 26046.0 68 22152.0 69 18258.0 70 15452.5 71 12647.0 72 10765.5 73 8884.0 74 7554.0 75 4545.5 76 2867.0 77 1974.5 78 1082.0 79 844.5 80 607.0 81 431.0 82 255.0 83 185.0 84 115.0 85 97.5 86 80.0 87 47.5 88 15.0 89 8.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2099657.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.50289786197846 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3718245992383 13.892369390793375 2 7.731004721407858 2.7062997201854997 3 2.9108493626098375 1.5284489725609525 4 1.525564673495289 1.0680721064812224 5 0.9556832584257269 0.8363613230314133 6 0.6794359968629938 0.7135259314106699 7 0.45946454226159733 0.5629372668083797 8 0.36582091945015327 0.5122340951128865 9 0.29971654714448404 0.47213173009932796 >10 3.2428363885661864 13.139847787339932 >50 1.0115241719530081 12.753982123816723 >100 1.4282849697300097 49.10715708659063 >500 0.016081834582154293 1.8304703514114764 >1k 0.0016354408049648436 0.5196860284071416 >5k 2.725734674941406E-4 0.3564760859504418 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7472 0.3558676488588374 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3675 0.1750285880027071 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2713 0.12921158074866515 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.033862673760523744 0.0 2 4.7626826667403294E-5 0.0 0.0 0.12068637877519994 0.0 3 4.7626826667403294E-5 0.0 0.0 0.17159945648265407 0.0 4 4.7626826667403294E-5 0.0 0.0 0.2560418201639601 0.0 5 4.7626826667403294E-5 0.0 0.0 0.44288186118018324 0.0 6 4.7626826667403294E-5 0.0 0.0 0.6477248426766848 0.0 7 4.7626826667403294E-5 0.0 0.0 0.7859378936654892 0.0 8 4.7626826667403294E-5 0.0 0.0 1.1949094542584813 0.0 9 4.7626826667403294E-5 0.0 0.0 1.3725575177278955 0.0 10 4.7626826667403294E-5 0.0 0.0 1.66703418701245 0.0 11 4.7626826667403294E-5 0.0 0.0 1.8860223360291706 0.0 12 4.7626826667403294E-5 0.0 0.0 2.097628326912443 0.0 13 4.7626826667403294E-5 0.0 0.0 2.1816896759804103 0.0 14 4.7626826667403294E-5 0.0 0.0 2.2158857375276058 0.0 15 4.7626826667403294E-5 0.0 0.0 2.2633220568883394 0.0 16 4.7626826667403294E-5 0.0 0.0 2.374911711770065 0.0 17 4.7626826667403294E-5 0.0 0.0 2.502551607238706 0.0 18 9.525365333480659E-5 0.0 0.0 2.69415433092167 0.0 19 9.525365333480659E-5 0.0 0.0 2.7688331951361578 0.0 20 9.525365333480659E-5 0.0 0.0 2.8535613197774685 0.0 21 9.525365333480659E-5 0.0 0.0 2.9586260994057603 0.0 22 9.525365333480659E-5 0.0 0.0 3.067882039780783 0.0 23 9.525365333480659E-5 0.0 0.0 3.194807532849413 0.0 24 9.525365333480659E-5 0.0 0.0 3.2883942472508605 0.0 25 9.525365333480659E-5 0.0 0.0 3.3635970065586904 0.0 26 9.525365333480659E-5 0.0 0.0 3.4407048389332164 0.0 27 9.525365333480659E-5 0.0 0.0 3.5205750272544516 0.0 28 9.525365333480659E-5 0.0 0.0 3.6042077348824115 0.0 29 9.525365333480659E-5 0.0 0.0 3.7006996857105707 0.0 30 9.525365333480659E-5 0.0 0.0 3.8245294350458194 0.0 31 9.525365333480659E-5 0.0 0.0 3.928165409874089 0.0 32 1.428804800022099E-4 0.0 0.0 4.028943775102315 0.0 33 1.428804800022099E-4 0.0 0.0 4.132579749930584 0.0 34 1.428804800022099E-4 0.0 0.0 4.240787900118924 0.0 35 1.9050730666961318E-4 0.0 0.0 4.3832397386811275 0.0 36 2.3813413333701648E-4 0.0 0.0 4.49397211068284 0.0 37 2.3813413333701648E-4 0.0 0.0 4.603418558364533 0.0 38 2.3813413333701648E-4 0.0 0.0 4.721818849459697 0.0 39 2.3813413333701648E-4 0.0 0.0 4.845315211008274 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCACG 75 0.0 45.000004 1 GCGCTAA 35 1.2125747E-7 45.000004 10 ACAACGT 20 7.034623E-4 45.0 35 GTCGACC 20 7.034623E-4 45.0 9 TAGAACG 95 0.0 45.0 1 CGCGATC 20 7.034623E-4 45.0 12 TATGCGA 20 7.034623E-4 45.0 21 CCGTAGT 20 7.034623E-4 45.0 28 GGGCGTA 25 3.8919115E-5 45.0 7 CGTAAGT 20 7.034623E-4 45.0 14 ATGCGAT 20 7.034623E-4 45.0 22 CCGAATA 45 3.8562575E-10 45.0 21 ATCGGCG 20 7.034623E-4 45.0 36 ACTACGT 30 2.1663636E-6 44.999996 43 GTCCGTT 30 2.1663636E-6 44.999996 9 ATACGTA 30 2.1663636E-6 44.999996 44 CGTTTTT 5745 0.0 42.76762 1 TCACGAC 780 0.0 42.692307 25 CGACGGT 765 0.0 42.64706 28 GTATGCG 235 0.0 42.12766 1 >>END_MODULE