SRR1545184_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545184_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1143957
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3512	0.3070045464995625	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3481	0.3042946544319411	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCGTC	40	6.8157533E-9	45.000004	43
TATTTCG	20	7.033271E-4	45.000004	12
ACCGGTA	40	6.8157533E-9	45.000004	41
GTCGACG	20	7.033271E-4	45.000004	1
ACGCATA	20	7.033271E-4	45.000004	14
CGATTGA	40	6.8157533E-9	45.000004	10
TCGATAT	20	7.033271E-4	45.000004	16
ATCGTCC	40	6.8157533E-9	45.000004	25
GTAATCG	20	7.033271E-4	45.000004	34
ATCCGAT	40	6.8157533E-9	45.000004	28
GTTACGT	20	7.033271E-4	45.000004	25
AATGCGG	155	0.0	45.000004	2
GAACGAC	20	7.033271E-4	45.000004	18
ACGCTAG	20	7.033271E-4	45.000004	1
CGTCGTA	20	7.033271E-4	45.000004	30
GTATACG	20	7.033271E-4	45.000004	1
GTCCCGA	20	7.033271E-4	45.000004	43
CCGGTAT	40	6.8157533E-9	45.000004	42
ACCGTCC	20	7.033271E-4	45.000004	27
ACGTACT	20	7.033271E-4	45.000004	29