##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545183_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2070248 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.05192662908019 31.0 31.0 33.0 30.0 34.0 2 31.334235801701052 31.0 31.0 34.0 30.0 34.0 3 31.444351111557648 31.0 31.0 34.0 30.0 34.0 4 35.21448493127394 37.0 35.0 37.0 33.0 37.0 5 35.061639475077385 37.0 35.0 37.0 32.0 37.0 6 35.12354075453762 37.0 35.0 37.0 32.0 37.0 7 35.75025166067061 37.0 35.0 37.0 35.0 37.0 8 35.757230534699225 37.0 35.0 37.0 35.0 37.0 9 37.44857427709144 39.0 37.0 39.0 35.0 39.0 10 36.610878986478916 39.0 35.0 39.0 32.0 39.0 11 36.302353148028644 38.0 35.0 39.0 32.0 39.0 12 35.60983853142232 37.0 35.0 39.0 30.0 39.0 13 35.27963074955271 37.0 35.0 39.0 30.0 39.0 14 36.2524282114993 38.0 35.0 40.0 30.0 41.0 15 36.53968413446118 38.0 35.0 40.0 31.0 41.0 16 36.66255347185458 38.0 35.0 40.0 31.0 41.0 17 36.61051960924488 38.0 35.0 40.0 31.0 41.0 18 36.53398530031185 38.0 35.0 40.0 31.0 41.0 19 36.47043639216171 38.0 35.0 40.0 31.0 41.0 20 36.32629858838168 38.0 35.0 40.0 30.0 41.0 21 36.202400388745694 38.0 34.0 40.0 30.0 41.0 22 36.10506180901998 38.0 34.0 40.0 30.0 41.0 23 36.06061254497046 38.0 34.0 40.0 30.0 41.0 24 35.980103832970734 37.0 34.0 40.0 30.0 41.0 25 35.90432788728693 37.0 34.0 40.0 30.0 41.0 26 35.7644567220932 37.0 34.0 40.0 30.0 41.0 27 35.665730385924775 37.0 34.0 40.0 29.0 41.0 28 35.67212672104984 37.0 34.0 40.0 29.0 41.0 29 35.635287173324166 37.0 34.0 40.0 29.0 41.0 30 35.55898713584073 37.0 34.0 40.0 29.0 41.0 31 35.431555060070096 37.0 34.0 40.0 29.0 41.0 32 35.27335372380507 37.0 34.0 40.0 28.0 41.0 33 35.071587558592014 37.0 34.0 40.0 27.0 41.0 34 34.919403375827436 37.0 34.0 40.0 26.0 41.0 35 34.79365322415479 37.0 33.0 40.0 26.0 41.0 36 34.6214530819496 37.0 33.0 40.0 24.0 41.0 37 34.59914029623504 36.0 33.0 40.0 25.0 41.0 38 34.573508584478766 36.0 33.0 40.0 25.0 41.0 39 34.52993409485241 36.0 33.0 40.0 24.0 41.0 40 34.41871263732654 36.0 33.0 40.0 24.0 41.0 41 34.38175184808777 36.0 33.0 40.0 24.0 41.0 42 34.29633164722294 36.0 33.0 40.0 24.0 41.0 43 34.24409587643606 36.0 33.0 40.0 24.0 41.0 44 34.106722962659546 35.0 33.0 40.0 23.0 41.0 45 34.048036756948925 35.0 33.0 40.0 23.0 41.0 46 33.953920979515495 35.0 33.0 40.0 23.0 41.0 47 33.87016289835807 35.0 33.0 40.0 23.0 41.0 48 33.82779019711648 35.0 33.0 39.0 23.0 41.0 49 33.811806121778645 35.0 33.0 39.0 24.0 41.0 50 33.74133871883948 35.0 33.0 39.0 24.0 41.0 51 33.580314049331285 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 3.0 12 0.0 13 4.0 14 18.0 15 69.0 16 207.0 17 560.0 18 1241.0 19 2268.0 20 3963.0 21 6393.0 22 9749.0 23 13943.0 24 19781.0 25 27189.0 26 35794.0 27 42243.0 28 47254.0 29 55087.0 30 65957.0 31 80825.0 32 98478.0 33 123931.0 34 189399.0 35 258661.0 36 162617.0 37 193809.0 38 257445.0 39 373121.0 40 236.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.88263048678226 24.068758911975763 29.487529996406224 13.561080604835748 2 30.787712390013176 25.68624628546918 30.730666084449787 12.795375240067857 3 29.18867691213806 24.743557293618927 32.369406950278425 13.698358843964586 4 26.27979836232181 27.372421081918684 31.460675242772844 14.887105312986657 5 22.06523083224812 32.26898419899452 31.272340318647814 14.393444650109553 6 19.82506443672449 42.763089253074995 27.38208176025288 10.02976454994764 7 87.5409129727453 4.226595074599758 6.550664461455826 1.681827491199122 8 88.94460953470309 3.0770709596145003 6.220897206518253 1.7574222991641582 9 84.14822765195281 5.492192239770308 7.71323049219224 2.646349616084643 10 43.592941521981906 31.61795108605346 13.541952461734052 11.24715493023058 11 39.54511729995633 22.265544997507543 23.93896769855592 14.250370003980201 12 37.395036729899026 21.45235739872711 25.743002770682544 15.409603100691319 13 23.119355748683247 35.34900166550094 24.837845514160623 16.693797071655183 14 17.038248557660722 37.23703633574335 27.413527268230663 18.31118783836526 15 15.94475637701377 24.489626363604746 41.47135995301046 18.094257306371027 16 18.568548309188078 20.673030477508007 39.372915708649394 21.385505504654514 17 17.686528377276538 21.441295922034463 29.628624203477074 31.24355149721193 18 21.08771509500311 25.23707304632102 32.83369915101959 20.841512707656282 19 27.717162388274254 25.782225124719353 24.877164474980777 21.623448012025612 20 28.987203465478533 24.93136088043558 25.62176125758846 20.459674396497423 21 22.494841197769546 28.97556234808583 27.66460829813626 20.864988156008362 22 23.300541770840983 25.35048940996441 25.433909367380142 25.91505945181447 23 20.32312070824365 29.56027490426268 26.212946468249214 23.90365791924446 24 19.65885246598475 24.41808904054007 37.266549708054306 18.65650878542088 25 19.262619744107955 26.90605183533567 31.900622534111854 21.930705886444525 26 18.219363090798783 32.373029704653746 26.768387169073467 22.63922003547401 27 17.804436956345327 32.657005344287256 28.271830234831768 21.266727464535652 28 17.07003218938021 28.570393498749908 35.03860407062342 19.32097024124646 29 18.048417387675293 25.359908571340245 33.50468156472075 23.086992476263713 30 20.234242467569103 30.60918305439735 29.699823402800053 19.4567510752335 31 27.704361989481452 27.58481109509585 25.190943307275266 19.519883608147428 32 28.74781185635731 26.65419795116334 25.557276229707742 19.040713962771612 33 26.253134890119444 28.513830227103227 24.643617576251735 20.589417306525597 34 19.249046491048418 27.710448216831995 28.76930686565088 24.27119842646871 35 20.710320695877982 26.386983588439644 30.583099222895033 22.319596492787337 36 27.07897797751767 27.37623704986069 26.2939512560814 19.250833716540242 37 19.672812146177655 33.5544823615335 27.41782627008938 19.354879222199468 38 19.888438486596772 32.58822131454782 26.117933696832456 21.40540650202295 39 20.170530293955117 31.922503970538795 26.567589969897327 21.339375765608757 40 23.546454337837787 27.62987815952485 26.253231496902785 22.570436005734578 41 18.362872467453176 25.615433513279566 27.525301316557243 28.496392702710015 42 19.626923924090253 27.445890540650204 25.463809166824458 27.46337636843509 43 20.841174583914583 26.620916914302057 26.528319312468845 26.009589189314518 44 19.656437296401204 28.55739988639042 29.0883507676375 22.697812049570874 45 18.344468875226543 34.95083680795731 24.28525471344496 22.419439603371192 46 20.624099141745337 33.36286280677484 25.849994783233697 20.163043268246124 47 19.977654851013018 28.18449770269069 27.76817076987878 24.06967667641751 48 20.316213323234706 26.852000340055877 31.14496427481152 21.6868220618979 49 20.815380572762297 26.211545669890757 30.79949841758089 22.173575339766057 50 19.30324289650322 31.174477647122472 28.075235430731006 21.447044025643304 51 18.751231736487608 30.923010190083506 26.871708123857623 23.45404994957126 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1234.0 1 2010.0 2 2786.0 3 10782.5 4 18779.0 5 13388.5 6 7998.0 7 8522.0 8 9046.0 9 9675.0 10 10304.0 11 10603.0 12 10902.0 13 10965.5 14 11029.0 15 10291.0 16 9553.0 17 8794.5 18 8036.0 19 7917.0 20 7798.0 21 7987.0 22 8176.0 23 8198.0 24 8220.0 25 9652.0 26 15293.5 27 19503.0 28 23607.5 29 27712.0 30 32379.0 31 37046.0 32 43794.5 33 50543.0 34 60953.5 35 71364.0 36 72676.5 37 73989.0 38 79666.5 39 85344.0 40 111509.5 41 137675.0 42 158670.0 43 179665.0 44 182671.0 45 185677.0 46 179346.0 47 173015.0 48 165957.0 49 158899.0 50 147663.5 51 136428.0 52 126624.5 53 116821.0 54 108506.0 55 100191.0 56 95560.5 57 90930.0 58 85723.0 59 80516.0 60 73737.5 61 66959.0 62 57841.0 63 48723.0 64 43004.5 65 37286.0 66 29115.5 67 20945.0 68 18233.0 69 15521.0 70 13756.5 71 11992.0 72 10381.0 73 8770.0 74 7038.0 75 3782.5 76 2259.0 77 1703.0 78 1147.0 79 778.5 80 410.0 81 433.5 82 457.0 83 298.0 84 139.0 85 88.5 86 38.0 87 27.0 88 16.0 89 13.0 90 10.0 91 7.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2070248.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.109005708512843 #Duplication Level Percentage of deduplicated Percentage of total 1 78.8606801194888 14.28088506461028 2 8.082804993830738 2.927431235481539 3 2.889922039398736 1.5700084412588637 4 1.4922220964376072 1.080906338510305 5 0.941613548328357 0.8525842560945626 6 0.6144372960609331 0.667610910113438 7 0.4546756551147096 0.5763606823795865 8 0.3870316325162608 0.560700643408961 9 0.29578479459657964 0.48207316804566824 >10 3.5139430627636408 14.841409772823116 >50 1.118428111592867 14.597035191291152 >100 1.3356472457174318 45.27223761092853 >500 0.010941366047616093 1.24580010514338 >1k 0.0016011755191633304 0.473982987363601 >5k 0.0 0.0 >10k+ 2.6686258652722174E-4 0.570973592546997 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11815 0.5707045725922691 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3531 0.17055927599012294 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03337764364462615 0.0 2 0.0 0.0 0.0 0.12534730138611413 0.0 3 0.0 0.0 0.0 0.18239360694950557 0.0 4 0.0 0.0 0.0 0.2678423068154154 0.0 5 0.0 0.0 0.0 0.4629880091660516 0.0 6 0.0 0.0 0.0 0.6806430920353503 0.0 7 0.0 0.0 0.0 0.8322191350987901 0.0 8 0.0 0.0 0.0 1.2294662282006794 0.0 9 0.0 0.0 0.0 1.4075608332914704 0.0 10 0.0 0.0 0.0 1.7068486480846738 0.0 11 0.0 0.0 0.0 1.9274985412375716 0.0 12 0.0 0.0 0.0 2.139647037456382 0.0 13 0.0 0.0 0.0 2.2245644000139113 0.0 14 0.0 0.0 0.0 2.2556717842500027 0.0 15 0.0 0.0 0.0 2.3039751759209524 0.0 16 0.0 0.0 0.0 2.4143967292807433 0.0 17 0.0 0.0 0.0 2.5441879427005847 0.0 18 0.0 0.0 0.0 2.743680950301606 0.0 19 0.0 0.0 0.0 2.818937634524946 0.0 20 0.0 0.0 0.0 2.904048210649159 0.0 21 0.0 0.0 0.0 3.0050989060247852 0.0 22 0.0 0.0 0.0 3.1124773457093062 0.0 23 0.0 0.0 0.0 3.231255385828171 0.0 24 0.0 0.0 0.0 3.3279104725617414 0.0 25 0.0 0.0 0.0 3.4080941027355176 0.0 26 0.0 0.0 0.0 3.4875531820342296 0.0 27 0.0 0.0 0.0 3.569668947874844 0.0 28 0.0 0.0 0.0 3.6534753324239415 0.0 29 0.0 0.0 0.0 3.7454449901654296 0.0 30 4.830339167094957E-5 0.0 0.0 3.8715168424266078 0.0 31 4.830339167094957E-5 0.0 0.0 3.9723260208438798 0.0 32 9.660678334189913E-5 0.0 0.0 4.069850568627527 0.0 33 1.9321356668379827E-4 0.0 0.0 4.164042182385878 0.0 34 1.9321356668379827E-4 0.0 0.0 4.264320023494769 0.0 35 1.9321356668379827E-4 0.0 0.0 4.403675308465459 0.0 36 1.9321356668379827E-4 0.0 0.0 4.510087680316561 0.0 37 1.9321356668379827E-4 0.0 0.0 4.615002647025864 0.0 38 1.9321356668379827E-4 0.0 0.0 4.721076895135269 0.0 39 1.9321356668379827E-4 0.0 0.0 4.8402896657791725 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 20 7.034599E-4 45.0 19 CGCATCG 85 0.0 45.0 21 TATATCG 35 1.2125565E-7 45.0 1 TCGATAG 70 0.0 45.0 1 TCTAGCG 100 0.0 45.0 1 AACGCAT 35 1.2125565E-7 45.0 26 CGTACTC 40 6.8193913E-9 45.0 30 TATAGCG 110 0.0 45.0 1 CACCGTT 20 7.034599E-4 45.0 10 TTATTCG 35 1.2125565E-7 45.0 19 TGTCGTA 35 1.2125565E-7 45.0 42 TAGTCCG 40 6.8193913E-9 45.0 1 CGAACGC 30 2.166349E-6 44.999996 15 GTCGATA 30 2.166349E-6 44.999996 21 CACAACG 105 0.0 44.999996 12 CGTTTTT 7485 0.0 42.86573 1 CGACGGT 570 0.0 42.23684 28 CGGTCTA 575 0.0 41.478264 31 TCGACGG 125 0.0 41.399998 2 CGTTAGG 370 0.0 41.351353 2 >>END_MODULE