##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545181_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1401994 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.998355199808273 31.0 31.0 33.0 28.0 34.0 2 31.283553281968395 31.0 31.0 34.0 28.0 34.0 3 31.39373848960837 31.0 31.0 34.0 28.0 34.0 4 35.179086358429494 37.0 35.0 37.0 32.0 37.0 5 35.03664281016894 35.0 35.0 37.0 32.0 37.0 6 35.078654402229965 37.0 35.0 37.0 32.0 37.0 7 35.70997522100665 37.0 35.0 37.0 35.0 37.0 8 35.70782114616753 37.0 35.0 37.0 35.0 37.0 9 37.39554163569887 39.0 37.0 39.0 35.0 39.0 10 36.49135873620001 38.0 35.0 39.0 32.0 39.0 11 36.21670278189493 38.0 35.0 39.0 31.0 39.0 12 35.56421282830026 37.0 35.0 39.0 30.0 39.0 13 35.276638131118965 37.0 35.0 39.0 30.0 39.0 14 36.16950286520484 38.0 35.0 40.0 29.0 41.0 15 36.435939811439994 38.0 35.0 40.0 30.0 41.0 16 36.545052261279295 38.0 35.0 40.0 31.0 41.0 17 36.48312902908286 38.0 35.0 40.0 31.0 41.0 18 36.401137237391886 38.0 35.0 40.0 30.0 41.0 19 36.33577461815101 38.0 35.0 40.0 30.0 41.0 20 36.185412348412335 38.0 34.0 40.0 30.0 41.0 21 36.067687165565616 38.0 34.0 40.0 30.0 41.0 22 35.99705847528591 38.0 34.0 40.0 30.0 41.0 23 35.94757966153921 37.0 34.0 40.0 30.0 41.0 24 35.85436884893944 37.0 34.0 40.0 30.0 41.0 25 35.76920371984473 37.0 34.0 40.0 30.0 41.0 26 35.626417802073334 37.0 34.0 40.0 29.0 41.0 27 35.51698366754779 37.0 34.0 40.0 29.0 41.0 28 35.51593444765099 37.0 34.0 40.0 29.0 41.0 29 35.46369028683432 37.0 34.0 40.0 29.0 41.0 30 35.378588638753094 37.0 34.0 40.0 29.0 41.0 31 35.21829836646947 37.0 34.0 40.0 27.0 41.0 32 35.08275784347151 37.0 34.0 40.0 27.0 41.0 33 34.88783332881596 37.0 33.0 40.0 26.0 41.0 34 34.69757502528542 37.0 33.0 40.0 25.0 41.0 35 34.53814566966763 37.0 33.0 40.0 24.0 41.0 36 34.38201376040126 36.0 33.0 40.0 24.0 41.0 37 34.321757439760795 36.0 33.0 40.0 23.0 41.0 38 34.24821718209921 36.0 33.0 40.0 23.0 41.0 39 34.19097870604296 36.0 33.0 40.0 23.0 41.0 40 34.04498378737712 36.0 33.0 40.0 23.0 41.0 41 33.971064070174336 36.0 33.0 40.0 23.0 41.0 42 33.90733412553834 36.0 33.0 40.0 23.0 41.0 43 33.8436070339816 35.0 33.0 40.0 23.0 41.0 44 33.73140398603703 35.0 32.0 40.0 23.0 41.0 45 33.692677714740576 35.0 32.0 40.0 23.0 41.0 46 33.64391431061759 35.0 32.0 39.0 23.0 41.0 47 33.520164137649665 35.0 32.0 39.0 23.0 41.0 48 33.46824808094757 35.0 32.0 39.0 23.0 41.0 49 33.42669797445638 35.0 32.0 39.0 23.0 41.0 50 33.34851932319254 35.0 32.0 39.0 23.0 41.0 51 33.20252012490781 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 0.0 13 2.0 14 11.0 15 60.0 16 180.0 17 490.0 18 1050.0 19 2050.0 20 3349.0 21 5456.0 22 8074.0 23 11463.0 24 15695.0 25 20741.0 26 26606.0 27 30698.0 28 34503.0 29 39383.0 30 46116.0 31 55575.0 32 67584.0 33 84601.0 34 126189.0 35 161632.0 36 112449.0 37 135958.0 38 176470.0 39 235489.0 40 117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.01733102994734 23.587476123292966 29.588500378746275 13.806692468013415 2 30.842999328099836 25.581849850997934 30.765894861176296 12.809255959725933 3 28.945487641173926 25.63612968386455 31.728024513656976 13.690358161304541 4 26.102964777310035 27.678435143089057 31.597781445569666 14.620818634031243 5 23.414151558423217 32.10498761050333 30.643569088027483 13.837291743045977 6 20.07383769117414 41.72820996380869 27.866381739151524 10.331570605865647 7 87.61642346543566 3.854224768436955 6.963296561896841 1.5660552042305458 8 88.80137860789704 3.248587369132821 6.325704674913017 1.6243293480571246 9 84.49465546928161 4.724128633931386 8.052887530189144 2.72832836659786 10 44.05453946307901 26.67857351743303 15.690152739598028 13.57673427988993 11 39.55230906836976 23.078486783823614 21.793531213400342 15.575672934406281 12 35.71555941038264 21.279834293156746 25.7702957359304 17.234310560530215 13 24.45595344915884 31.391004526410242 25.970011283928464 18.183030740502456 14 19.601867055065856 33.53166989302379 28.87651445013317 17.989948601777183 15 18.059278427725083 23.528631363614966 40.231983874396036 18.18010633426391 16 20.82904777053254 19.63068315556272 37.98061903260642 21.559650041298323 17 21.286325048466683 20.564567323397963 28.72644248120891 29.422665146926448 18 23.76878931008264 22.637115422747886 32.53972556230626 21.054369704863216 19 28.718025897400416 24.66993439344248 25.3006075632278 21.3114321459293 20 29.630725951751575 24.28006111295769 25.437769348513616 20.65144358677712 21 24.035409566660057 26.70803156076274 28.563674309590482 20.69288456298672 22 23.911871234826968 22.780197347492216 27.644126865022244 25.66380455265857 23 21.631618965559056 28.02465631093999 26.45596200839661 23.887762715104344 24 21.153656863010823 24.9396217102213 34.41847825311663 19.48824317365124 25 21.276267944085355 24.856240468932107 31.542645688925912 22.324845898056626 26 19.66698858910951 29.72523420214352 27.22643606178058 23.381341146966392 27 19.788315784518336 29.540639974208165 29.15504631260904 21.51599792866446 28 18.588381975957102 27.20853298944218 33.66669186886677 20.536393165733948 29 19.673194036493737 25.500109130281583 32.54200802571195 22.28468880751273 30 22.469639670355225 27.791702389596534 29.96589143748119 19.77276650256706 31 27.659248185084955 24.497608406312725 26.788131760906253 21.055011647696066 32 28.366241224998113 25.63784153141882 26.281567538805444 19.71434970477762 33 27.413384080103054 25.823220356149886 25.60595837072056 21.157437193026503 34 21.42548398923248 26.81010047118604 28.032288297952775 23.73212724162871 35 22.262220808362944 25.37821131902134 29.603479044846125 22.75608882776959 36 28.252688670564925 25.562520239030977 25.6961156752454 20.488675415158696 37 21.374913159400112 31.17759419797802 26.67479318741735 20.772699455204517 38 22.985833034948794 29.326516375961663 24.961590420501086 22.726060168588454 39 22.290537619989813 29.2902822693963 25.091619507644115 23.327560602969772 40 24.62756616647432 25.787770846380226 25.762592421936187 23.822070565209266 41 21.22762294275154 24.524213370385322 26.509671225411807 27.73849246145133 42 22.11771234399006 26.412809184632746 24.521360291128207 26.948118180248986 43 21.993746050268403 26.22714505197597 26.43278073943255 25.34632815832307 44 21.398451063271313 27.190201955215215 28.203972342249685 23.207374639263794 45 19.725548040861803 32.08023714794785 24.86387245594489 23.330342355245456 46 21.977768806428557 29.066743509601324 27.00653497803842 21.948952705931696 47 21.839893751328464 27.600688733332667 26.899473178915173 23.659944336423695 48 22.27427506822426 26.391339763222955 28.80404623700244 22.530338931550347 49 22.966646076944695 25.262162320238176 29.50547577236422 22.265715830452912 50 21.254085252861284 29.924022499383025 26.285347868821123 22.536544378934575 51 20.338032830383014 30.66175746829159 25.856244748550992 23.143964952774407 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 724.0 1 1216.0 2 1708.0 3 7040.0 4 12372.0 5 8959.0 6 5546.0 7 5753.0 8 5960.0 9 6280.0 10 6600.0 11 6708.0 12 6816.0 13 6761.5 14 6707.0 15 6471.0 16 6235.0 17 5738.0 18 5241.0 19 5004.0 20 4767.0 21 4863.0 22 4959.0 23 5207.5 24 5456.0 25 5816.0 26 8297.0 27 10418.0 28 12383.5 29 14349.0 30 16211.0 31 18073.0 32 23328.5 33 28584.0 34 31921.5 35 35259.0 36 36907.5 37 38556.0 38 46430.5 39 54305.0 40 66786.5 41 79268.0 42 91145.5 43 103023.0 44 107889.0 45 112755.0 46 111297.0 47 109839.0 48 109342.0 49 108845.0 50 105455.0 51 102065.0 52 93628.5 53 85192.0 54 82696.5 55 80201.0 56 77891.0 57 75581.0 58 70424.0 59 65267.0 60 61109.0 61 56951.0 62 49088.5 63 41226.0 64 37552.5 65 33879.0 66 29270.0 67 24661.0 68 20380.0 69 16099.0 70 12856.5 71 9614.0 72 8807.0 73 8000.0 74 6519.5 75 3934.0 76 2829.0 77 2030.0 78 1231.0 79 1068.0 80 905.0 81 621.5 82 338.0 83 308.5 84 279.0 85 169.0 86 59.0 87 42.5 88 26.0 89 17.0 90 8.0 91 5.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1401994.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.996826931654216 #Duplication Level Percentage of deduplicated Percentage of total 1 77.71258569722427 16.317177122959645 2 7.265069075985446 3.050867960699588 3 2.885437620276492 1.8175510300508908 4 1.6596253474283063 1.3938746476535457 5 1.0739928026545704 1.1275220501590137 6 0.7527182635163144 0.9482817064408406 7 0.5902455141241616 0.86752980350752 8 0.49207809423328747 0.8265662865179655 9 0.40928728837495953 0.7734360923401568 >10 4.9799841001406415 24.100642683155428 >50 1.2678918366261422 19.114512636351602 >100 0.9063178493138797 28.319014560470603 >500 0.0037451150798091066 0.5300034935649923 >1k 6.809300145107466E-4 0.28630482758670006 >5k 3.404650072553733E-4 0.5267150985415245 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7368 0.525537199160624 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2508 0.17888806942112448 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1497 0.10677649119753722 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02703292596116674 0.0 2 0.0 0.0 0.0 0.10691914516039298 0.0 3 0.0 0.0 0.0 0.1527823942185202 0.0 4 0.0 0.0 0.0 0.21612075372647815 0.0 5 0.0 0.0 0.0 0.36590741472502736 0.0 6 0.0 0.0 0.0 0.5243246404763501 0.0 7 0.0 0.0 0.0 0.6305305158224643 0.0 8 0.0 0.0 0.0 0.8871649949999786 0.0 9 0.0 0.0 0.0 1.0084208634273757 0.0 10 0.0 0.0 0.0 1.2235430394138633 0.0 11 0.0 0.0 0.0 1.4022884548721322 0.0 12 0.0 0.0 0.0 1.5763262895561607 0.0 13 0.0 0.0 0.0 1.6450854996526376 0.0 14 0.0 0.0 0.0 1.677111314313756 0.0 15 0.0 0.0 0.0 1.7192655603376334 0.0 16 0.0 0.0 0.0 1.812061963175306 0.0 17 0.0 0.0 0.0 1.9199796860756893 0.0 18 0.0 0.0 0.0 2.0887393241340546 0.0 19 0.0 0.0 0.0 2.157355880267676 0.0 20 0.0 0.0 0.0 2.232962480581229 0.0 21 0.0 0.0 0.0 2.3296105404160077 0.0 22 0.0 0.0 0.0 2.4292543334707566 0.0 23 0.0 0.0 0.0 2.5408810594053897 0.0 24 0.0 0.0 0.0 2.620909932567472 0.0 25 0.0 0.0 0.0 2.6929501838096312 0.0 26 0.0 0.0 0.0 2.7678435143089057 0.0 27 0.0 0.0 0.0 2.850796793709531 0.0 28 7.132698142788058E-5 0.0 0.0 2.935675901608709 0.0 29 7.132698142788058E-5 0.0 0.0 3.037031542217727 0.0 30 1.4265396285576115E-4 0.0 0.0 3.1663473595464744 0.0 31 1.4265396285576115E-4 0.0 0.0 3.269200866765478 0.0 32 1.4265396285576115E-4 0.0037803300156776707 0.0 3.3676321011359533 0.0 33 1.4265396285576115E-4 0.0037803300156776707 0.0 3.462496986435035 0.0 34 2.1398094428364174E-4 0.0037803300156776707 0.0 3.574694328221091 0.0 35 2.1398094428364174E-4 0.0037803300156776707 0.0 3.701228393274151 0.0 36 2.1398094428364174E-4 0.0037803300156776707 0.0 3.8106439827845198 0.0 37 2.1398094428364174E-4 0.0037803300156776707 0.0 3.925765730809119 0.0 38 2.1398094428364174E-4 0.0037803300156776707 0.0 4.062285573262082 0.0 39 2.1398094428364174E-4 0.0037803300156776707 0.0 4.28482575531707 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGTCG 20 7.033817E-4 45.000004 29 TCGATAG 35 1.2121927E-7 45.000004 1 ATCGTAA 40 6.8175723E-9 45.000004 14 CTACGTC 20 7.033817E-4 45.000004 22 TAGGCCG 45 3.8562575E-10 45.000004 5 CCGTTAG 20 7.033817E-4 45.000004 27 ACGTTAG 55 1.8189894E-12 45.0 1 ACCTTCG 25 3.8912454E-5 45.0 25 CGTTTTT 5415 0.0 43.2964 1 TCACGAC 425 0.0 42.882355 25 CGGTCTA 445 0.0 41.96629 31 CGACGGT 435 0.0 41.89655 28 ACGGTCT 435 0.0 41.89655 30 ACGGGTA 135 0.0 41.666664 5 CTCACGA 445 0.0 41.460674 24 GACGGTC 445 0.0 40.955055 29 AATCGTA 45 1.9288564E-8 40.000004 13 AACGGGA 370 0.0 39.527027 4 GATTGCG 160 0.0 39.375004 1 TATGTCG 40 3.458954E-7 39.375004 1 >>END_MODULE