##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545178_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1751013 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07222105147135 31.0 31.0 33.0 30.0 34.0 2 31.353111598828793 31.0 31.0 34.0 30.0 34.0 3 31.46063849897174 31.0 31.0 34.0 30.0 34.0 4 35.25828591792294 37.0 35.0 37.0 33.0 37.0 5 35.08084805766719 37.0 35.0 37.0 32.0 37.0 6 35.14331703990776 37.0 35.0 37.0 32.0 37.0 7 35.73755134884778 37.0 35.0 37.0 35.0 37.0 8 35.7425518828244 37.0 35.0 37.0 35.0 37.0 9 37.44158153023421 39.0 37.0 39.0 35.0 39.0 10 36.61622729243015 39.0 35.0 39.0 32.0 39.0 11 36.29506063061782 38.0 35.0 39.0 32.0 39.0 12 35.49855083885728 37.0 35.0 39.0 30.0 39.0 13 35.106191673048684 37.0 34.0 39.0 30.0 39.0 14 36.046844883504576 38.0 35.0 40.0 30.0 41.0 15 36.40108097427032 38.0 35.0 40.0 31.0 41.0 16 36.56108778175833 38.0 35.0 40.0 31.0 41.0 17 36.48266460614513 38.0 35.0 40.0 31.0 41.0 18 36.43320066727089 38.0 35.0 40.0 31.0 41.0 19 36.350466272951714 37.0 35.0 40.0 31.0 41.0 20 36.13554154081095 37.0 34.0 40.0 30.0 41.0 21 36.041107062026384 37.0 34.0 40.0 30.0 41.0 22 35.94249728585682 37.0 34.0 40.0 30.0 41.0 23 35.85515527297627 37.0 34.0 40.0 30.0 41.0 24 35.82471346586233 37.0 34.0 40.0 30.0 41.0 25 35.771663602725965 37.0 34.0 40.0 30.0 41.0 26 35.595919619100485 37.0 34.0 40.0 29.0 41.0 27 35.48900379380393 36.0 34.0 40.0 29.0 41.0 28 35.53992860132963 36.0 34.0 40.0 29.0 41.0 29 35.5265015165507 36.0 34.0 40.0 29.0 41.0 30 35.48516887081935 36.0 34.0 40.0 29.0 41.0 31 35.34202144701381 36.0 34.0 40.0 29.0 41.0 32 35.10771878906667 36.0 34.0 40.0 27.0 41.0 33 34.87173024986108 36.0 33.0 40.0 26.0 41.0 34 34.70160187274452 36.0 34.0 40.0 26.0 41.0 35 34.53233928017667 36.0 33.0 40.0 25.0 41.0 36 34.324841677360475 36.0 33.0 40.0 24.0 41.0 37 34.245084987946974 36.0 33.0 40.0 24.0 41.0 38 34.26586553041011 36.0 33.0 40.0 24.0 41.0 39 34.214396466502535 36.0 33.0 40.0 24.0 41.0 40 34.05463009126717 36.0 33.0 40.0 23.0 41.0 41 34.07633352807775 36.0 33.0 40.0 23.0 41.0 42 33.95047381144515 35.0 33.0 40.0 23.0 41.0 43 33.85804559988989 35.0 33.0 40.0 23.0 41.0 44 33.766920062843624 35.0 33.0 40.0 23.0 41.0 45 33.724601701986224 35.0 33.0 40.0 23.0 41.0 46 33.638674869918155 35.0 33.0 39.0 23.0 41.0 47 33.521964714139756 35.0 32.0 39.0 23.0 41.0 48 33.53208571267032 35.0 33.0 39.0 23.0 41.0 49 33.49495063714547 35.0 32.0 39.0 23.0 41.0 50 33.400929062205705 35.0 32.0 39.0 23.0 41.0 51 33.25966683285618 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 7.0 14 15.0 15 76.0 16 166.0 17 466.0 18 1157.0 19 2248.0 20 4030.0 21 6477.0 22 10349.0 23 15049.0 24 20955.0 25 27000.0 26 31938.0 27 35945.0 28 39312.0 29 45888.0 30 55233.0 31 66725.0 32 83254.0 33 106621.0 34 166499.0 35 237020.0 36 129538.0 37 155146.0 38 204982.0 39 304688.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.09986847613353 24.364410772507114 29.196813501670178 13.33890724968918 2 29.197898587846005 26.9800395542466 31.404392771498557 12.41766908640884 3 26.498261292177727 27.30705026176276 33.01032031172812 13.184368134331384 4 25.44030227074271 28.209899069852707 31.982686593417636 14.367112065986944 5 23.755049220080036 32.06463915459223 30.269221302183364 13.911090323144373 6 19.485691996575696 42.80533611115394 27.04228923486005 10.66668265741031 7 86.51991732785537 4.659874027205966 7.387952002640757 1.4322566422979155 8 87.92738831750535 4.847536825825965 5.478600101769661 1.7464747548990214 9 83.91114172196323 5.424345792978122 7.059285110961483 3.6052273740971654 10 46.76904169186636 29.036277857445945 12.921091962195597 11.27358848849209 11 41.91750718012944 22.065570044311492 22.451803613108527 13.565119162450538 12 38.84357226359827 21.232794959260726 24.929512230920047 14.99412054622096 13 21.92416618266112 39.32814890580481 24.275033937497895 14.472650974036172 14 15.054771152470028 41.8047724374405 27.262333289358786 15.878123120730686 15 12.93434143550048 24.149278160698977 44.9447833910999 17.97159701270065 16 15.056541556230593 20.391167855407126 42.76387439727746 21.788416191084817 17 15.466989679688274 21.827022415024903 29.430906566655985 33.27508133863084 18 19.82292535806416 24.172693178177433 33.866167755464986 22.138213708293428 19 26.954968352605036 26.159942844513434 25.181651992303884 21.70343681057765 20 29.752663172689182 24.19319559592076 25.35189630231186 20.702244929078194 21 20.51395392267219 30.769446029241358 27.61121704978775 21.1053829982987 22 21.072944632621233 26.283242899967046 25.511403970158987 27.132408497252737 23 19.279582732966574 31.546767499727302 24.75447069781892 24.419179069487203 24 18.051150962328663 25.339960354377723 38.97880826698603 17.63008041630759 25 17.05224347277833 28.476716049509626 33.77433519911045 20.696705278601588 26 16.50421784418505 34.607510052752325 27.244515032155668 21.643757070906954 27 16.828201732368633 35.0782661236667 26.89614525991526 21.197386884049404 28 14.925246128955067 30.205086998211893 35.71555436767174 19.154112505161297 29 15.477497882654212 24.724145394694386 36.854723522897885 22.943633199753513 30 18.075194187593123 32.60695380331271 30.01936593274864 19.298486076345522 31 26.7189906642612 28.390194704436805 24.895931669268016 19.994882962033977 32 29.51000363789418 27.083636729139076 24.873259079173028 18.53310055379372 33 28.209442191462884 27.81812585057907 23.657905452443813 20.314526505514234 34 19.33395126135557 28.079974277746654 26.782325431050484 25.803749029847296 35 20.682085170127234 26.678899585554188 30.41068227363246 22.22833297068611 36 28.378772744691215 27.49402774279803 24.760981214873905 19.366218297636852 37 19.100257964960853 33.50306365515276 27.888428012813154 19.50825036707323 38 19.730693033118545 32.40558465299801 25.447440995583698 22.41628131829975 39 19.5421164777189 33.096327668612396 25.955832423859786 21.405723429808916 40 23.326383070828143 27.44576996287292 25.668170367667177 23.55967659863176 41 17.394388276957397 25.483877047172122 27.59088596144061 29.530848714429876 42 20.60361630667505 25.626937092985603 25.46674410755374 28.302702492785603 43 21.106125425682162 26.550231209020147 26.108486915859565 26.235156449438122 44 19.426240696099914 29.33621852036507 29.129309719573754 22.108231063961263 45 17.015293433001354 36.9148601409584 23.0926326646347 22.97721376140554 46 20.701673831090915 33.91242669243461 25.75743298307894 19.62846649339554 47 20.406701720661125 28.941646920953758 26.774786937618394 23.876864420766722 48 20.788652054553562 26.747488453826442 31.035634801112273 21.428224690507726 49 20.38505710694324 25.688729895209228 32.020778829169174 21.905434168678358 50 19.28420862666354 32.81357705511038 27.26376103432699 20.638453283899093 51 18.203291466139888 32.15978407927297 26.229159920571693 23.407764534015453 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1606.0 1 2170.0 2 2734.0 3 6908.5 4 11083.0 5 8458.5 6 5834.0 7 6664.5 8 7495.0 9 8172.5 10 8850.0 11 9326.0 12 9802.0 13 9782.5 14 9763.0 15 9416.5 16 9070.0 17 8599.5 18 8129.0 19 8404.0 20 8679.0 21 7947.0 22 7215.0 23 8198.5 24 9182.0 25 9954.0 26 12349.0 27 13972.0 28 17794.0 29 21616.0 30 26315.0 31 31014.0 32 36987.0 33 42960.0 34 49757.5 35 56555.0 36 63980.5 37 71406.0 38 78351.0 39 85296.0 40 108329.5 41 131363.0 42 146036.0 43 160709.0 44 161232.0 45 161755.0 46 157598.5 47 153442.0 48 142743.0 49 132044.0 50 125705.0 51 119366.0 52 110338.5 53 101311.0 54 93166.0 55 85021.0 56 77625.5 57 70230.0 58 63474.5 59 56719.0 60 49055.0 61 41391.0 62 36925.5 63 32460.0 64 26344.0 65 20228.0 66 19796.5 67 19365.0 68 14875.5 69 10386.0 70 9445.0 71 8504.0 72 7431.5 73 6359.0 74 5046.5 75 2991.5 76 2249.0 77 1528.0 78 807.0 79 599.0 80 391.0 81 262.5 82 134.0 83 85.5 84 37.0 85 24.5 86 12.0 87 8.5 88 5.0 89 3.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1751013.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.599138982791732 #Duplication Level Percentage of deduplicated Percentage of total 1 80.16764431486581 14.108815142203369 2 7.868264606320978 2.769493647200479 3 2.829688014206762 1.4940021791989424 4 1.488936106981137 1.0481597393303157 5 0.8627548309099068 0.7591871088629216 6 0.6122547641943668 0.6465094012759823 7 0.4397662963390791 0.541765571845332 8 0.34052766092652603 0.4794394905704727 9 0.27405011472066587 0.4340741451497116 >10 2.78126532660581 11.22358872968557 >50 0.878944206544403 11.151008881705875 >100 1.439633040382087 52.71434104235006 >500 0.014643645302258703 1.6587718128945594 >1k 9.762430201505801E-4 0.30003816902895314 >5k 6.508286801003867E-4 0.6708049386974857 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6384 0.3645889550791456 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5329 0.3043381174211728 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2475 0.14134675185164244 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03215281668382816 0.0 2 0.0 0.0 0.0 0.13917657949998086 0.0 3 0.0 0.0 0.0 0.1979996721897553 0.0 4 0.0 0.0 0.0 0.30148262748477594 0.0 5 0.0 0.0 0.0 0.5343763866973004 0.0 6 0.0 0.0 0.0 0.7611022876472077 0.0 7 0.0 0.0 0.0 0.92763446073787 0.0 8 0.0 0.0 0.0 1.3278599302232479 0.0 9 0.0 0.0 0.0 1.5151229602521512 0.0 10 0.0 0.0 0.0 1.9200885430319479 0.0 11 0.0 0.0 0.0 2.156066231375781 0.0 12 0.0 0.0 0.0 2.4308214730558824 0.0 13 5.710979872793634E-5 0.0 0.0 2.5221971510205807 0.0 14 5.710979872793634E-5 0.0 0.0 2.558690312407732 0.0 15 5.710979872793634E-5 0.0 0.0 2.6148292445572934 0.0 16 5.710979872793634E-5 0.0 0.0 2.729734159597901 0.0 17 5.710979872793634E-5 0.0 0.0 2.8582312067357583 0.0 18 1.1421959745587268E-4 0.0 0.0 3.0803883237874303 0.0 19 1.1421959745587268E-4 0.0 0.0 3.1790740559893043 0.0 20 1.1421959745587268E-4 0.0 0.0 3.2785593253733696 0.0 21 1.1421959745587268E-4 0.0 0.0 3.3763884105943247 0.0 22 1.1421959745587268E-4 0.0 0.0 3.476273448569485 0.0 23 1.1421959745587268E-4 0.0 0.0 3.5854673837372997 0.0 24 1.1421959745587268E-4 0.0 0.0 3.6692474584711823 0.0 25 1.1421959745587268E-4 0.0 0.0 3.7377221071459776 0.0 26 1.1421959745587268E-4 0.0 0.0 3.8098517829393614 0.0 27 1.1421959745587268E-4 0.0 0.0 3.8896341717622884 0.0 28 1.1421959745587268E-4 0.0 0.0 3.9718151721317887 0.0 29 1.1421959745587268E-4 0.0 0.0 4.053482184312738 0.0 30 1.1421959745587268E-4 0.0 0.0 4.165702938813133 0.0 31 1.1421959745587268E-4 0.0 0.0 4.257192836375287 0.0 32 1.7132939618380902E-4 0.0 0.0 4.343314412857015 0.0 33 1.7132939618380902E-4 0.0 0.0 4.429892867728566 0.0 34 1.7132939618380902E-4 0.0 0.0 4.520240569316162 0.0 35 1.7132939618380902E-4 0.0 0.0 4.630405371062351 0.0 36 1.7132939618380902E-4 0.0 0.0 4.722637696007968 0.0 37 1.7132939618380902E-4 0.0 0.0 4.815955107129416 0.0 38 1.7132939618380902E-4 0.0 0.0 4.913612862954187 0.0 39 1.7132939618380902E-4 0.0 0.0 5.01092795998659 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCCGC 30 2.1661563E-6 45.000004 26 TAAGTCG 30 2.1661563E-6 45.000004 15 CTAACCG 30 2.1661563E-6 45.000004 26 CTTATCG 30 2.1661563E-6 45.000004 21 CGTAGCA 30 2.1661563E-6 45.000004 40 ACGTACT 60 0.0 45.000004 19 TAGGCCG 30 2.1661563E-6 45.000004 5 TATCGAC 30 2.1661563E-6 45.000004 23 TGCACGA 30 2.1661563E-6 45.000004 2 AGTCGAT 30 2.1661563E-6 45.000004 26 CTAGACG 35 1.212411E-7 45.0 1 CTATGCG 35 1.212411E-7 45.0 1 TCGTTAC 20 7.0343E-4 45.0 39 ACCGGTA 50 2.1827873E-11 45.0 41 ACACGTC 20 7.0343E-4 45.0 29 GTCGATC 25 3.891646E-5 45.0 44 TAGCGAT 20 7.0343E-4 45.0 18 CCGTGTA 35 1.212411E-7 45.0 11 ATAGCCG 25 3.891646E-5 45.0 1 CGCGATA 20 7.0343E-4 45.0 11 >>END_MODULE