##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545177_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1942237 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.004024740544022 31.0 31.0 33.0 28.0 34.0 2 31.28173183808155 31.0 31.0 34.0 28.0 34.0 3 31.390698457500296 31.0 31.0 34.0 28.0 34.0 4 35.18238042010321 37.0 35.0 37.0 32.0 37.0 5 35.02787970778026 37.0 35.0 37.0 32.0 37.0 6 35.070188138728696 37.0 35.0 37.0 32.0 37.0 7 35.715810686337456 37.0 35.0 37.0 35.0 37.0 8 35.71915064948305 37.0 35.0 37.0 35.0 37.0 9 37.36771568042417 39.0 37.0 39.0 35.0 39.0 10 36.524326845796885 39.0 35.0 39.0 32.0 39.0 11 36.261557163209226 38.0 35.0 39.0 31.0 39.0 12 35.75437240666304 37.0 35.0 39.0 30.0 39.0 13 35.54503853031324 37.0 35.0 39.0 30.0 39.0 14 36.44191208384971 38.0 35.0 40.0 30.0 41.0 15 36.659796924886095 38.0 35.0 40.0 31.0 41.0 16 36.73083511435525 38.0 35.0 40.0 31.0 41.0 17 36.655569840343894 38.0 35.0 40.0 31.0 41.0 18 36.57163518149433 38.0 35.0 40.0 31.0 41.0 19 36.507728974373364 38.0 35.0 40.0 30.0 41.0 20 36.39034577139659 38.0 35.0 40.0 30.0 41.0 21 36.268697383481005 38.0 34.0 40.0 30.0 41.0 22 36.20515879370026 38.0 34.0 40.0 30.0 41.0 23 36.12001521956383 38.0 34.0 40.0 30.0 41.0 24 36.05119354641066 38.0 34.0 40.0 30.0 41.0 25 35.935363192030636 38.0 34.0 40.0 30.0 41.0 26 35.787376102916376 38.0 34.0 40.0 29.0 41.0 27 35.67822207073596 38.0 34.0 40.0 29.0 41.0 28 35.65660524436513 38.0 34.0 40.0 29.0 41.0 29 35.61039564172653 37.0 34.0 40.0 29.0 41.0 30 35.51814994771493 37.0 34.0 40.0 29.0 41.0 31 35.37098768070014 37.0 34.0 40.0 27.0 41.0 32 35.22946272777215 37.0 34.0 40.0 27.0 41.0 33 35.00247189194727 37.0 33.0 40.0 26.0 41.0 34 34.79162069304621 37.0 33.0 40.0 25.0 41.0 35 34.64375974713693 37.0 33.0 40.0 24.0 41.0 36 34.515970502055104 37.0 33.0 40.0 24.0 41.0 37 34.47305555398234 37.0 33.0 40.0 24.0 41.0 38 34.39827580259258 37.0 33.0 40.0 24.0 41.0 39 34.32166156859333 37.0 33.0 40.0 23.0 41.0 40 34.197007883178 37.0 33.0 40.0 23.0 41.0 41 34.09578336732335 36.0 33.0 40.0 23.0 41.0 42 34.01258085393286 36.0 33.0 40.0 23.0 41.0 43 33.94637781074091 36.0 33.0 40.0 23.0 41.0 44 33.820600163625755 36.0 33.0 40.0 23.0 41.0 45 33.74868515016448 36.0 32.0 40.0 23.0 41.0 46 33.69427520946208 35.0 32.0 40.0 23.0 41.0 47 33.59012159690089 35.0 32.0 40.0 23.0 41.0 48 33.50350291957161 35.0 32.0 39.0 23.0 41.0 49 33.45027666551508 35.0 32.0 39.0 23.0 41.0 50 33.385182652786455 35.0 32.0 39.0 22.0 41.0 51 33.22838150030094 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 4.0 12 4.0 13 7.0 14 24.0 15 92.0 16 262.0 17 664.0 18 1425.0 19 2768.0 20 4670.0 21 7056.0 22 10649.0 23 15158.0 24 20654.0 25 28301.0 26 36250.0 27 42274.0 28 47341.0 29 53527.0 30 63273.0 31 75703.0 32 91415.0 33 114290.0 34 163534.0 35 204947.0 36 162284.0 37 196676.0 38 255448.0 39 343372.0 40 161.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.94058655045703 22.221747397459733 28.250929212037462 14.586736840045782 2 31.57802060201716 25.397260993380318 29.730048392652392 13.294670011950139 3 28.751022660983182 25.538386921884403 32.3748337612763 13.335756655856107 4 26.728457958529262 27.517084681220677 31.01408324524762 14.740374115002444 5 23.04023659316551 32.5094208379307 30.07624713152926 14.374095437374532 6 20.451983975179136 41.37728814763595 28.047967369584658 10.122760507600256 7 86.53949028877527 3.999872312184352 7.581515541100288 1.879121857940097 8 87.5516736628949 3.192710261415059 7.238508997614606 2.0171070780754357 9 82.30658771303399 5.5518456295498435 9.018981720562422 3.122584936853741 10 39.75328448587891 31.922829191288187 15.191812327743731 13.132073995089169 11 35.301047194549376 23.894921165645595 24.78523475765316 16.01879688215187 12 32.17542452337176 22.094368503946736 28.37717539105681 17.353031581624695 13 24.89248222539268 28.68470737608232 29.010929150253034 17.411881248271968 14 20.096466085240884 31.030404631360643 30.421725052091997 18.45140423130648 15 18.980845283042182 23.740820507486983 38.63704583941095 18.641288370059886 16 22.005141494060716 21.68113366185486 36.04524061687631 20.268484227208113 17 21.802025190540597 21.877144756278454 29.855316318245407 26.46551373493554 18 23.67280615084565 23.4687115938992 32.342860320341956 20.515621934913195 19 27.33796133015693 25.28409251806036 26.494964311770396 20.882981840012317 20 27.933666179771055 25.38299908816483 26.35234525961559 20.330989472448522 21 24.727620779544413 26.710231552586013 29.127701717143683 19.43444595072589 22 24.33848186395378 23.344164486620326 28.376917955944613 23.94043569348128 23 21.60101985494046 27.262275407172243 27.84382132561577 23.29288341227152 24 21.346879912183734 24.995559244314673 33.69794726390239 19.959613579599196 25 21.58711835888205 25.591984912242943 30.327709749119187 22.493186979755816 26 19.83975179136223 29.03466466759721 27.689875128524477 23.43570841251608 27 20.16103081137884 28.477626571834435 29.585524320667357 21.775818296119372 28 19.898549970987062 26.869738348100668 32.28277496515616 20.948936715756112 29 20.558253189492323 25.78485529829779 31.873041240590105 21.783850271619787 30 22.967485430459824 26.712342520505995 30.34907686343119 19.971095185602994 31 26.78972751523115 25.51506330071974 27.279060176487214 20.4161490075619 32 27.641837736589302 25.270139534979513 26.958656435852063 20.129366292579125 33 26.817684968415286 25.425733316788836 26.754047008681226 21.002534706114652 34 21.966577714254235 26.371704380052485 28.867640766806524 22.79407713888676 35 22.01276157338162 26.11807930752014 29.281493453167663 22.587665665930572 36 26.670792493398075 26.585632958284698 26.11416629381481 20.629408254502412 37 22.097921108494997 30.144107027103285 26.812381805104113 20.945590059297604 38 22.434697722265614 29.698898744077063 25.864351260942925 22.0020522727144 39 21.963334031840603 28.827223454192254 25.74567367422204 23.463768839745097 40 23.8381824669183 26.082141365858032 26.9015573279677 23.17811883925597 41 21.13907828962171 25.16083258634245 27.67489240499486 26.025196719040984 42 22.27091750388856 26.434518547427526 26.34899860315708 24.94556534552683 43 22.561922154711294 26.38586331122309 26.85182086429205 24.200393669773565 44 22.407872983575125 27.262944738463947 28.36090549196622 21.968276785994707 45 20.781964301987863 30.030063272401875 26.076941176591735 23.11103124901853 46 22.492208726329483 28.435870596636764 27.62690650008212 21.44501417695163 47 21.326491051298067 27.99292774259784 27.649663763999964 23.03091744210413 48 22.079746189574188 27.200748415358166 28.534159322471975 22.18534607259567 49 23.17106511718189 25.615617455542246 29.028074328725072 22.185243098550796 50 21.444499306727245 28.325688368618245 27.764067927858445 22.465744396796065 51 20.95423987906728 28.558718632175168 27.484390421972186 23.00265106678536 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 975.0 1 1707.0 2 2439.0 3 11340.0 4 20241.0 5 14502.0 6 8763.0 7 8895.0 8 9027.0 9 9728.0 10 10429.0 11 10313.5 12 10198.0 13 10255.5 14 10313.0 15 9632.0 16 8951.0 17 8710.5 18 8470.0 19 8325.5 20 8181.0 21 8282.0 22 8383.0 23 9029.0 24 9675.0 25 11149.0 26 14441.0 27 16259.0 28 19461.0 29 22663.0 30 26738.5 31 30814.0 32 35829.0 33 40844.0 34 46098.5 35 51353.0 36 56727.5 37 62102.0 38 71485.5 39 80869.0 40 93532.0 41 106195.0 42 120711.0 43 135227.0 44 135279.5 45 135332.0 46 142595.5 47 149859.0 48 149517.0 49 149175.0 50 143403.5 51 137632.0 52 129718.5 53 121805.0 54 115195.5 55 108586.0 56 105336.0 57 102086.0 58 96092.5 59 90099.0 60 80481.5 61 70864.0 62 64994.5 63 59125.0 64 53102.0 65 47079.0 66 39399.5 67 31720.0 68 26361.5 69 21003.0 70 18514.5 71 16026.0 72 13829.5 73 11633.0 74 9394.0 75 5641.5 76 4128.0 77 3064.5 78 2001.0 79 1485.5 80 970.0 81 780.0 82 590.0 83 429.5 84 269.0 85 171.5 86 74.0 87 50.0 88 26.0 89 15.5 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1942237.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.11962496213312 #Duplication Level Percentage of deduplicated Percentage of total 1 77.4866656215774 16.364893174939287 2 7.0480065827221505 2.977025115154746 3 2.839120596929386 1.7988348668824843 4 1.7070969497829915 1.442129894136727 5 1.1332114767198718 1.1966500695554372 6 0.8281029723006199 1.0493534523010082 7 0.6590957194466907 0.974389808620299 8 0.5424219107131861 0.9164597860404919 9 0.43008233590278633 0.8174859873394508 >10 5.160423336283263 25.14405104589736 >50 1.3225686148208424 19.802141678158673 >100 0.838560151331527 26.12254252749362 >500 0.0031772899527014414 0.4135103942078708 >1k 0.0012220345971928619 0.3591052069035273 >5k 0.0 0.0 >10k+ 2.444069194385724E-4 0.6214269923690621 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12039 0.6198522631378148 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.031613031777275376 0.0 2 0.0 0.0 0.0 0.11059412419802526 0.0 3 0.0 0.0 0.0 0.16264750388340868 0.0 4 0.0 0.0 0.0 0.2299410422106056 0.0 5 0.0 0.0 0.0 0.39608966361983633 0.0 6 0.0 0.0 0.0 0.609194449493033 0.0 7 0.0 0.0 0.0 0.7667447381550243 0.0 8 0.0 0.0 0.0 1.1659751101436127 0.0 9 0.0 0.0 0.0 1.3773293372538984 0.0 10 0.0 0.0 0.0 1.7093691449601671 0.0 11 0.0 0.0 0.0 1.9320505170069358 0.0 12 0.0 0.0 0.0 2.1475237059123065 0.0 13 0.0 0.0 0.0 2.2347427219232254 0.0 14 0.0 0.0 0.0 2.2713499948770415 0.0 15 0.0 0.0 0.0 2.3181516982736916 0.0 16 0.0 0.0 0.0 2.4095411631021344 0.0 17 0.0 0.0 0.0 2.5126696690465686 0.0 18 0.0 0.0 0.0 2.679281673657746 0.0 19 5.148702243855925E-5 0.0 0.0 2.7460603417605576 0.0 20 5.148702243855925E-5 0.0 0.0 2.8331763837265997 0.0 21 5.148702243855925E-5 0.0 0.0 2.9285303492828114 0.0 22 5.148702243855925E-5 0.0 0.0 3.0278488155667924 0.0 23 5.148702243855925E-5 0.0 0.0 3.135096283306311 0.0 24 5.148702243855925E-5 0.0 0.0 3.2155190123553408 0.0 25 5.148702243855925E-5 0.0 0.0 3.2880642269712705 0.0 26 5.148702243855925E-5 0.0 0.0 3.3599401102954993 0.0 27 5.148702243855925E-5 0.0 0.0 3.44247380726451 0.0 28 5.148702243855925E-5 0.0 0.0 3.5192409577204016 0.0 29 5.148702243855925E-5 0.0 0.0 3.614543436254175 0.0 30 5.148702243855925E-5 0.0 0.0 3.7463502136968865 0.0 31 5.148702243855925E-5 0.0 0.0 3.849066823461812 0.0 32 5.148702243855925E-5 0.0 0.0 3.945810938623865 0.0 33 5.148702243855925E-5 0.0 0.0 4.049145392658054 0.0 34 5.148702243855925E-5 0.0 0.0 4.156907730621958 0.0 35 1.029740448771185E-4 0.0 0.0 4.276821005881363 0.0 36 1.029740448771185E-4 0.0 0.0 4.3815456095213925 0.0 37 1.029740448771185E-4 0.0 0.0 4.491933785629663 0.0 38 1.029740448771185E-4 0.0 0.0 4.626520862284057 0.0 39 1.029740448771185E-4 0.0 0.0 4.833910588666574 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTCGAT 40 6.8193913E-9 45.0 34 ATGCGAT 20 7.0344907E-4 45.0 34 TATACGA 20 7.0344907E-4 45.0 18 TCGACTA 20 7.0344907E-4 45.0 26 CGTTTTT 8445 0.0 42.68206 1 GCGTAAG 145 0.0 41.896553 1 CGCATCG 70 0.0 41.785713 21 CGGTCTA 605 0.0 41.65289 31 CGACGGT 605 0.0 41.28099 28 AGTACGG 235 0.0 40.212765 2 ATTCGGC 175 0.0 39.857143 17 ACGTTAG 130 0.0 39.80769 1 CTCACGA 645 0.0 39.767445 24 TAGTACG 85 0.0 39.705883 1 TCACGAC 655 0.0 39.50382 25 GTATCGC 40 3.4598634E-7 39.375 15 CACGACG 655 0.0 39.160305 26 TAGGGAC 1530 0.0 39.11765 5 TCGATAG 110 0.0 38.863636 1 GGGCGAT 3260 0.0 38.16718 7 >>END_MODULE