SRR1545176_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545176_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	954616
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2856	0.29917788932932193	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2742	0.28723591475525234	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGCT	20	7.032684E-4	45.000004	31
GGTACGT	20	7.032684E-4	45.000004	8
CTCACAT	20	7.032684E-4	45.000004	23
ACAGTCG	40	6.8121153E-9	45.000004	12
TACTTCG	20	7.032684E-4	45.000004	1
TCCGATA	20	7.032684E-4	45.000004	15
ACGCACT	20	7.032684E-4	45.000004	28
TCACACG	40	6.8121153E-9	45.000004	1
GACAATC	20	7.032684E-4	45.000004	31
CCGGAAC	20	7.032684E-4	45.000004	19
CGTCTTA	20	7.032684E-4	45.000004	22
TGTATCG	30	2.165114E-6	45.000004	14
GATCACG	30	2.165114E-6	45.000004	9
TATGCGT	30	2.165114E-6	45.000004	20
ATCGTTA	20	7.032684E-4	45.000004	29
CCCACCG	20	7.032684E-4	45.000004	29
CGTTACC	20	7.032684E-4	45.000004	35
GTGTCGT	20	7.032684E-4	45.000004	20
TCGCTGA	20	7.032684E-4	45.000004	43
TCTCGAG	20	7.032684E-4	45.000004	1