##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545176_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 954616 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09161065810755 31.0 31.0 33.0 30.0 34.0 2 31.363771401275486 31.0 31.0 34.0 30.0 34.0 3 31.489750852698887 31.0 31.0 34.0 30.0 34.0 4 35.247491137797816 37.0 35.0 37.0 33.0 37.0 5 35.10152040192077 37.0 35.0 37.0 32.0 37.0 6 35.15216799215601 37.0 35.0 37.0 32.0 37.0 7 35.747629413292884 37.0 35.0 37.0 35.0 37.0 8 35.75853327411232 37.0 35.0 37.0 35.0 37.0 9 37.49309565312125 39.0 37.0 39.0 35.0 39.0 10 36.694745321679086 39.0 37.0 39.0 32.0 39.0 11 36.3519970333621 38.0 35.0 39.0 32.0 39.0 12 35.28790319877312 37.0 35.0 39.0 30.0 39.0 13 34.77855598481484 37.0 33.0 39.0 27.0 39.0 14 35.665448724932325 37.0 34.0 40.0 27.0 41.0 15 36.102705171503516 37.0 34.0 40.0 30.0 41.0 16 36.338388420055814 37.0 35.0 40.0 31.0 41.0 17 36.272733748439165 37.0 35.0 40.0 31.0 41.0 18 36.2082188021152 37.0 35.0 40.0 31.0 41.0 19 36.14259346166417 37.0 35.0 40.0 31.0 41.0 20 35.97786335028954 36.0 34.0 40.0 30.0 41.0 21 35.82241760037544 36.0 34.0 40.0 30.0 41.0 22 35.72135706922993 36.0 34.0 40.0 30.0 41.0 23 35.70400139951562 36.0 34.0 40.0 30.0 41.0 24 35.673228816613175 36.0 34.0 40.0 30.0 41.0 25 35.58408302395937 36.0 34.0 40.0 30.0 41.0 26 35.3837364971884 35.0 34.0 40.0 29.0 41.0 27 35.31304943558457 35.0 34.0 40.0 29.0 41.0 28 35.33061985133289 36.0 34.0 40.0 29.0 41.0 29 35.400516019006595 36.0 34.0 40.0 29.0 41.0 30 35.3623383643266 36.0 34.0 40.0 29.0 41.0 31 35.17092946273685 36.0 34.0 40.0 29.0 41.0 32 34.96739317170464 35.0 34.0 40.0 28.0 41.0 33 34.75772352443286 35.0 33.0 40.0 27.0 41.0 34 34.61898606350616 35.0 34.0 40.0 26.0 41.0 35 34.45573508091211 35.0 33.0 40.0 25.0 41.0 36 34.241903550747104 35.0 33.0 40.0 24.0 41.0 37 34.183691662406666 35.0 33.0 40.0 24.0 41.0 38 34.211084876012976 35.0 33.0 40.0 24.0 41.0 39 34.20635417801503 35.0 33.0 40.0 24.0 41.0 40 34.001327235244325 35.0 33.0 40.0 23.0 41.0 41 34.00888629564139 35.0 33.0 40.0 23.0 41.0 42 33.94146232621284 35.0 33.0 40.0 23.0 41.0 43 33.89801867976233 35.0 33.0 40.0 23.0 41.0 44 33.78940851609443 35.0 33.0 39.0 23.0 41.0 45 33.73666479505896 35.0 33.0 39.0 23.0 41.0 46 33.68701341691319 35.0 33.0 39.0 23.0 41.0 47 33.600569234121366 35.0 33.0 39.0 23.0 41.0 48 33.59970396473556 35.0 33.0 39.0 23.0 41.0 49 33.62238219346837 35.0 33.0 39.0 24.0 41.0 50 33.52937725745221 35.0 33.0 39.0 24.0 41.0 51 33.346938454834195 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 4.0 14 6.0 15 30.0 16 106.0 17 269.0 18 620.0 19 1148.0 20 2048.0 21 3336.0 22 5136.0 23 7188.0 24 10202.0 25 13482.0 26 17081.0 27 19976.0 28 22229.0 29 25774.0 30 31012.0 31 37914.0 32 47182.0 33 60699.0 34 100606.0 35 145317.0 36 65628.0 37 77553.0 38 103303.0 39 156675.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.310147745271394 24.394625692425016 29.65527500062852 12.639951561675062 2 29.44712847888575 26.077815582391246 31.950962481249007 12.524093457474 3 27.51022400630201 26.62431805039932 32.391977507186134 13.473480436112531 4 24.7036504730698 28.31557401091119 32.31257385168487 14.668201664334141 5 23.10426391344792 32.66863325148541 30.72816713736204 13.498935697704626 6 19.59384715948612 42.115782681203754 27.271803531472337 11.01856662783779 7 87.748476874471 4.343526611747551 6.304210279316499 1.6037862344649576 8 89.68171495135216 3.203487056575628 5.411809565312126 1.7029884267600794 9 85.87693899955585 5.0340660537849775 6.670116570432509 2.4188783762266715 10 50.92539827532746 26.614680667409722 12.4229009360832 10.037020121179616 11 47.381774451716716 19.987722812104554 20.049003997418858 12.581498738759878 12 44.75988250773086 21.414474511217076 21.15122729977289 12.674415681279175 13 21.900848089703086 43.793839617186386 20.376989281554046 13.92832301155648 14 14.048999807252342 45.35446713652401 24.76105575435568 15.835477301867975 15 12.04976660772499 24.10361862780427 48.40281327779966 15.443801486671079 16 14.238604842156427 17.458328793986272 47.20295909559446 21.100107268262843 17 14.694390205066748 18.82358979945863 28.70620228447879 37.77581771099584 18 19.73673183772323 23.14438475785028 35.09976786477495 22.019115539651544 19 27.6165494816764 24.957365055687315 24.88948435810839 22.536601104527897 20 32.38275914084826 21.672379260351807 25.152626815389645 20.792234783410294 21 20.934700444995684 30.391592011866553 26.747194683516724 21.92651285962104 22 22.31389375413779 24.53300594165612 23.79595565127758 29.357144652928508 23 17.639867758344714 32.46394361711935 23.673498034811903 26.222690589724035 24 18.270278310860075 23.43968674315117 40.97270525530685 17.317329690681905 25 15.792842357555289 26.164237766808853 36.28893712236124 21.753982753274613 26 16.190070143387498 35.232386635044875 26.42821825739355 22.149324964174077 27 15.7068391897894 37.402159611822974 26.686856285668792 20.20414491271883 28 13.205624041499409 29.861640701601484 38.203843220729595 18.728892036169515 29 14.283125361401863 23.121967366983164 37.891571061033964 24.70333621058101 30 16.801415438249517 32.500398065819134 31.838770772750507 18.859415723180838 31 28.25911151709169 28.375702900433264 24.478848039421088 18.886337543053962 32 29.965347322902613 26.218081406555093 25.080241688804712 18.73632958173758 33 28.888055511326023 27.990836105826844 23.107511292498764 20.01359709034837 34 19.0065953220981 27.699724287043164 26.84629212164891 26.44738826920982 35 19.41827918241471 26.47357680994243 30.892840681488682 23.21530332615418 36 30.168570398987654 26.051627041658637 24.297413829225572 19.482388730128136 37 19.284612870515474 35.0338774962917 28.212286406261782 17.46922322693104 38 18.791325517276057 32.90024470572461 25.912723021612877 22.39570675538646 39 19.438287227534424 33.893314170305125 26.632279366782036 20.036119235378415 40 24.13274028509893 27.748958743620474 24.965221617907098 23.153079353373503 41 16.78580706797288 25.26722786963554 28.062906969922985 29.884058092468596 42 20.881904346878745 25.300749201773275 24.353771568882145 29.46357488246583 43 21.703281738416287 26.554970794539372 25.15168402792327 26.59006343912107 44 18.993396297568864 29.828224123626672 28.19908738173255 22.979292197071914 45 16.09652467589062 39.9719887368324 21.676359918543163 22.255126668733816 46 20.982468343291963 34.422636955592615 24.990991141987983 19.60390355912744 47 20.395635522555665 29.57901397001517 25.693158296110685 24.33219221131848 48 21.434063539685067 24.743352300820433 30.862042957587132 22.960541201907365 49 20.617085822990607 24.36372321436054 31.808496819663613 23.21069414298524 50 19.13135753014825 33.72623128043109 26.290990303954683 20.851420885465988 51 16.770722468510897 33.822290847838296 24.186374416519314 25.220612267131497 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 782.0 1 921.5 2 1061.0 3 3039.5 4 5018.0 5 3946.0 6 2874.0 7 3240.5 8 3607.0 9 3938.0 10 4269.0 11 4580.5 12 4892.0 13 4752.5 14 4613.0 15 4319.5 16 4026.0 17 3848.0 18 3670.0 19 3412.5 20 3155.0 21 3510.5 22 3866.0 23 3564.5 24 3263.0 25 3858.5 26 5484.0 27 6514.0 28 8709.5 29 10905.0 30 12385.5 31 13866.0 32 16899.0 33 19932.0 34 26340.5 35 32749.0 36 33171.0 37 33593.0 38 37933.0 39 42273.0 40 57904.5 41 73536.0 42 86117.5 43 98699.0 44 98894.5 45 99090.0 46 92187.0 47 85284.0 48 81559.5 49 77835.0 50 72696.0 51 67557.0 52 61309.0 53 55061.0 54 48106.0 55 41151.0 56 38474.5 57 35798.0 58 33294.0 59 30790.0 60 27651.5 61 24513.0 62 21450.5 63 18388.0 64 15087.5 65 11787.0 66 10622.5 67 9458.0 68 7796.5 69 6135.0 70 4857.5 71 3580.0 72 3319.5 73 3059.0 74 2440.0 75 1229.5 76 638.0 77 650.5 78 663.0 79 444.5 80 226.0 81 140.0 82 54.0 83 43.5 84 33.0 85 35.5 86 38.0 87 31.5 88 25.0 89 16.0 90 7.0 91 4.5 92 2.0 93 3.5 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 954616.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.474351632938355 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68621267370617 14.099392521903889 2 7.254771232314669 2.535448470599841 3 2.426726279259854 1.2721640496203652 4 1.1509537695733385 0.804486835311217 5 0.7137200337676839 0.6235897418764572 6 0.46974642017651197 0.49251084746870266 7 0.40601583063418784 0.496640437512894 8 0.32477812645213316 0.45402297474491937 9 0.2677972708440572 0.42116253093632566 >10 3.4253534985435588 14.456095916242695 >50 1.272557820252845 16.05495058142099 >100 1.5959570206760996 47.2446949377384 >500 0.004207796288034915 0.4568221405907939 >1k 0.0012022275108671185 0.588018014032482 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2856 0.29917788932932193 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2742 0.28723591475525234 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02482673661451306 0.0 2 0.0 0.0 0.0 0.10454465460457399 0.0 3 0.0 0.0 0.0 0.1526268153896436 0.0 4 0.0 0.0 0.0 0.2262689919297393 0.0 5 0.0 0.0 0.0 0.3801528572745481 0.0 6 0.0 0.0 0.0 0.5413695140244873 0.0 7 0.0 0.0 0.0 0.6503138434721396 0.0 8 0.0 0.0 0.0 0.9792419150737051 0.0 9 0.0 0.0 0.0 1.13700168444694 0.0 10 0.0 0.0 0.0 1.4048580790600618 0.0 11 0.0 0.0 0.0 1.5858732726038534 0.0 12 0.0 0.0 0.0 1.769612074383836 0.0 13 0.0 0.0 0.0 1.837283263636897 0.0 14 0.0 0.0 0.0 1.8634718043695055 0.0 15 0.0 0.0 0.0 1.9020213363279057 0.0 16 0.0 0.0 0.0 1.9887577832343057 0.0 17 0.0 0.0 0.0 2.0867029255742624 0.0 18 0.0 0.0 0.0 2.261013852690506 0.0 19 1.0475416293043486E-4 0.0 0.0 2.327427991988402 0.0 20 1.0475416293043486E-4 0.0 0.0 2.401174922691428 0.0 21 1.0475416293043486E-4 0.0 0.0 2.4855020238504277 0.0 22 1.0475416293043486E-4 0.0 0.0 2.567524533424958 0.0 23 1.0475416293043486E-4 0.0 0.0 2.6598129509666713 0.0 24 1.0475416293043486E-4 0.0 0.0 2.727169877730941 0.0 25 2.0950832586086971E-4 0.0 0.0 2.783108600735793 0.0 26 2.0950832586086971E-4 0.0 0.0 2.8395710945552977 0.0 27 2.0950832586086971E-4 0.0 0.0 2.903052117291141 0.0 28 2.0950832586086971E-4 0.0 0.0 2.9686282232855934 0.0 29 2.0950832586086971E-4 0.0 0.0 3.036718429190376 0.0 30 2.0950832586086971E-4 0.0 0.0 3.1336160299010283 0.0 31 2.0950832586086971E-4 0.0 0.0 3.2090390272109413 0.0 32 2.0950832586086971E-4 0.0 0.0 3.2836239912174108 0.0 33 2.0950832586086971E-4 0.0 0.0 3.3516094429592633 0.0 34 2.0950832586086971E-4 0.0 0.0 3.427241948595037 0.0 35 2.0950832586086971E-4 0.0 0.0 3.5400621820711153 0.0 36 2.0950832586086971E-4 0.0 0.0 3.6203038708758286 0.0 37 2.0950832586086971E-4 0.0 0.0 3.699183755562446 0.0 38 2.0950832586086971E-4 0.0 0.0 3.784977415002472 0.0 39 3.1426248879130457E-4 0.0 0.0 3.867104678739933 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCT 20 7.032684E-4 45.000004 31 GGTACGT 20 7.032684E-4 45.000004 8 CTCACAT 20 7.032684E-4 45.000004 23 ACAGTCG 40 6.8121153E-9 45.000004 12 TACTTCG 20 7.032684E-4 45.000004 1 TCCGATA 20 7.032684E-4 45.000004 15 ACGCACT 20 7.032684E-4 45.000004 28 TCACACG 40 6.8121153E-9 45.000004 1 GACAATC 20 7.032684E-4 45.000004 31 CCGGAAC 20 7.032684E-4 45.000004 19 CGTCTTA 20 7.032684E-4 45.000004 22 TGTATCG 30 2.165114E-6 45.000004 14 GATCACG 30 2.165114E-6 45.000004 9 TATGCGT 30 2.165114E-6 45.000004 20 ATCGTTA 20 7.032684E-4 45.000004 29 CCCACCG 20 7.032684E-4 45.000004 29 CGTTACC 20 7.032684E-4 45.000004 35 GTGTCGT 20 7.032684E-4 45.000004 20 TCGCTGA 20 7.032684E-4 45.000004 43 TCTCGAG 20 7.032684E-4 45.000004 1 >>END_MODULE