##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545175_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1652474 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.06026115993353 31.0 31.0 33.0 30.0 34.0 2 31.343641110238345 31.0 31.0 34.0 30.0 34.0 3 31.461547352636106 31.0 31.0 34.0 30.0 34.0 4 35.23696530172336 37.0 35.0 37.0 33.0 37.0 5 35.091487067270045 37.0 35.0 37.0 32.0 37.0 6 35.14544555617819 37.0 35.0 37.0 32.0 37.0 7 35.751432095149454 37.0 35.0 37.0 35.0 37.0 8 35.76553398117005 37.0 35.0 37.0 35.0 37.0 9 37.46651687106726 39.0 37.0 39.0 35.0 39.0 10 36.59977343062584 39.0 35.0 39.0 32.0 39.0 11 36.331466637296565 38.0 35.0 39.0 32.0 39.0 12 35.74192997892857 37.0 35.0 39.0 31.0 39.0 13 35.48360639864833 37.0 35.0 39.0 30.0 39.0 14 36.40555554883163 38.0 35.0 40.0 30.0 41.0 15 36.64597869618523 38.0 35.0 40.0 31.0 41.0 16 36.75481490177758 38.0 35.0 40.0 31.0 41.0 17 36.71266900417193 38.0 35.0 40.0 31.0 41.0 18 36.62625130561812 38.0 35.0 40.0 31.0 41.0 19 36.58450359884634 38.0 35.0 40.0 31.0 41.0 20 36.468648825942196 38.0 35.0 40.0 31.0 41.0 21 36.34760546913295 38.0 35.0 40.0 30.0 41.0 22 36.27784279813177 38.0 35.0 40.0 30.0 41.0 23 36.24104766550033 38.0 34.0 40.0 30.0 41.0 24 36.160345034173005 38.0 34.0 40.0 30.0 41.0 25 36.05659816735392 38.0 34.0 40.0 30.0 41.0 26 35.922003613975164 38.0 34.0 40.0 30.0 41.0 27 35.83761317878526 38.0 34.0 40.0 30.0 41.0 28 35.818935123941436 38.0 34.0 40.0 29.0 41.0 29 35.79255830954072 38.0 34.0 40.0 29.0 41.0 30 35.71749812705071 38.0 34.0 40.0 29.0 41.0 31 35.576291669339426 38.0 34.0 40.0 29.0 41.0 32 35.454317586842514 38.0 34.0 40.0 28.0 41.0 33 35.28125586242204 37.0 34.0 40.0 27.0 41.0 34 35.12615690171222 37.0 34.0 40.0 27.0 41.0 35 34.98895534816282 37.0 34.0 40.0 26.0 41.0 36 34.838557217844276 37.0 33.0 40.0 25.0 41.0 37 34.78939577869304 37.0 33.0 40.0 25.0 41.0 38 34.73902161244292 37.0 33.0 40.0 25.0 41.0 39 34.68641866679899 37.0 33.0 40.0 25.0 41.0 40 34.536661393764746 37.0 33.0 40.0 24.0 41.0 41 34.48448568631034 37.0 33.0 40.0 24.0 41.0 42 34.41189029297889 36.0 33.0 40.0 24.0 41.0 43 34.367251769165506 36.0 33.0 40.0 24.0 41.0 44 34.23965278727532 36.0 33.0 40.0 24.0 41.0 45 34.156545882113726 36.0 33.0 40.0 24.0 41.0 46 34.09482932863089 36.0 33.0 40.0 23.0 41.0 47 34.000628754219434 35.0 33.0 40.0 23.0 41.0 48 33.93371514468609 35.0 33.0 40.0 23.0 41.0 49 33.91795695423952 36.0 33.0 39.0 24.0 41.0 50 33.87560833029748 35.0 33.0 39.0 24.0 41.0 51 33.696072676483865 35.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 1.0 14 14.0 15 53.0 16 157.0 17 417.0 18 999.0 19 1863.0 20 3299.0 21 5100.0 22 7609.0 23 11154.0 24 15439.0 25 21119.0 26 27381.0 27 32348.0 28 36872.0 29 42826.0 30 50777.0 31 62170.0 32 76452.0 33 95833.0 34 144844.0 35 188052.0 36 134470.0 37 164649.0 38 219003.0 39 309381.0 40 190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.66213326200594 24.14730882301325 28.79724582656066 13.393312088420151 2 30.998914355082135 25.860316107847993 30.341415356610757 12.799354180459119 3 28.9073837167786 25.833628849833644 31.453142379244696 13.80584505414306 4 25.634593948225508 28.491340862246545 31.37913213763121 14.494933051896734 5 23.21119727148506 32.55433973545121 30.123439158498105 14.111023834565628 6 19.982039051749073 42.17415826209671 27.36890262721229 10.474900058941925 7 88.2635369754683 4.092590866785196 5.976432912106333 1.6674392456401737 8 90.14229573354861 2.660193140709022 5.623810117436038 1.5737010083063334 9 85.40079904434201 4.898352409780729 7.156179159248496 2.544669386628776 10 42.08889217016425 30.697548040090194 14.457958188752137 12.755601600993419 11 36.88251675971907 23.811932895767196 23.205569346325568 16.099980998188173 12 35.68031932726324 21.777165631652903 26.642718735665433 15.89979630541842 13 24.25526816155655 31.92274129577833 25.94606632237482 17.875924220290305 14 19.208532176603082 33.88192491984745 27.576167612924625 19.333375290624847 15 17.15421846274132 24.385860231386395 39.7406555261989 18.719265779673385 16 19.836499696818226 21.109742119997048 37.65094034762423 21.4028178355605 17 19.939678324742175 21.12299497601778 28.865083505095996 30.072243194144054 18 22.405435728489525 23.848060544371652 32.230764296442786 21.515739430696033 19 27.47208125513624 26.02951695457841 25.940075305269556 20.5583264850158 20 29.14006513869507 24.490672773066326 25.327660223398375 21.041601864840235 21 23.478493458898598 26.750617558884436 28.12479954298827 21.646089439228696 22 22.658813391315082 24.688557883512843 26.29850757107222 26.35412115409985 23 20.941993641049724 28.898730025404333 25.743642562606126 24.415633770939817 24 19.980102561371616 25.332985571936383 34.972713640275124 19.714198226416876 25 20.72407795826137 25.916050721524215 31.163152945220318 22.196718374994102 26 19.35733935904589 30.443867800643158 26.752614564586192 23.446178275724762 27 19.515102809484446 29.97844444148592 27.966733515928237 22.539719233101398 28 18.311695070542715 27.5450022209124 33.31005510525431 20.83324760329058 29 19.260212263551498 25.174072330336212 32.98805306467757 22.57766234143472 30 21.099636060839686 28.041288395460384 30.446167382966387 20.412908160733544 31 26.449856397135445 26.2674026943843 26.44477310989462 20.837967798585634 32 27.60491239196502 25.6169234735312 26.384318300923344 20.393845833580436 33 26.425347690795743 26.05335999235086 25.854506636715612 21.66678568013778 34 20.824593911916313 26.394000752810637 28.23330351945023 24.54810181582282 35 21.063447896910933 25.765670140649714 29.72070967531108 23.45017228712827 36 26.860755449102374 26.5557582146527 26.00422154902286 20.57926478722207 37 21.18514421406933 31.53042044837014 26.744021388536222 20.540413949024313 38 21.34980641147758 30.68284281628637 25.99998547632217 21.967365295913886 39 21.202270050844977 29.874297568373237 25.504849092935807 23.41858328784598 40 23.929272109576306 26.383229025086024 26.824809346470808 22.862689518866862 41 20.366674452971726 24.2382028401052 28.087280041925016 27.307842664998056 42 21.45377173861737 26.192363692257793 25.46636134668382 26.887503222441016 43 20.956577834204957 26.920847166127874 26.464259044317796 25.658315955349376 44 21.320577509842817 27.82609590226533 28.56644037969735 22.286886208194503 45 19.734289314083007 31.83886705630467 25.0853568649189 23.34148676469342 46 21.452077309537092 30.471220727224757 26.413123595288035 21.663578367950116 47 21.20947137443615 27.838743605043103 27.40406203062802 23.54772298989273 48 20.97751613641122 26.62353537786374 29.417769961887448 22.981178523837592 49 21.489596810600347 26.12470755969534 29.791210028115422 22.59448560158889 50 21.009891834909354 29.315438548503636 27.815868812459378 21.85880080412763 51 19.697132904965525 30.866083218253358 26.38710200584094 23.049681870940177 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 642.0 1 1188.5 2 1735.0 3 6723.0 4 11711.0 5 8701.0 6 5691.0 7 5831.5 8 5972.0 9 6307.0 10 6642.0 11 6685.5 12 6729.0 13 6546.0 14 6363.0 15 6191.0 16 6019.0 17 5857.5 18 5696.0 19 5271.5 20 4847.0 21 5427.0 22 6007.0 23 6014.5 24 6022.0 25 7647.0 26 10925.0 27 12578.0 28 17627.5 29 22677.0 30 25981.5 31 29286.0 32 33715.5 33 38145.0 34 45799.0 35 53453.0 36 56091.5 37 58730.0 38 64676.0 39 70622.0 40 87024.0 41 103426.0 42 116030.0 43 128634.0 44 130757.0 45 132880.0 46 129355.5 47 125831.0 48 124327.0 49 122823.0 50 118189.5 51 113556.0 52 107081.0 53 100606.0 54 93608.0 55 86610.0 56 84462.0 57 82314.0 58 76980.5 59 71647.0 60 64957.5 61 58268.0 62 53059.5 63 47851.0 64 42467.0 65 37083.0 66 30613.0 67 24143.0 68 20272.5 69 16402.0 70 14636.5 71 12871.0 72 10588.0 73 8305.0 74 6860.5 75 4065.0 76 2714.0 77 1994.5 78 1275.0 79 879.5 80 484.0 81 394.0 82 304.0 83 225.0 84 146.0 85 87.5 86 29.0 87 18.5 88 8.0 89 8.0 90 8.0 91 4.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1652474.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.857846889084907 #Duplication Level Percentage of deduplicated Percentage of total 1 77.78962782004629 14.669448909893326 2 7.015399515787105 2.6459065986894728 3 2.707745715472497 1.5318676235086803 4 1.5537686405601125 1.1720292449897682 5 1.0530438268199802 0.9929069626833615 6 0.759594141148412 0.8594586006973621 7 0.5777284231614813 0.7626299903216168 8 0.4650349118117924 0.7015645732020707 9 0.39233877538134965 0.6658798099313311 >10 5.117590889458768 22.644122522676966 >50 1.4407197858346348 19.317865347008624 >100 1.1219502856033559 32.68308306080401 >500 0.003531174003325311 0.5130482912970754 >1k 0.001605079092420596 0.43326095820804356 >5k 3.210158184841192E-4 0.4069275060883706 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6722 0.4067840099148307 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2372 0.14354234922909528 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019364903774582838 0.0 2 0.0 0.0 0.0 0.0657196421849905 0.0 3 0.0 0.0 0.0 0.09815585600741676 0.0 4 0.0 0.0 0.0 0.14378441052627758 0.0 5 0.0 0.0 0.0 0.24974674336782304 0.0 6 0.0 0.0 0.0 0.39316806194832715 0.0 7 0.0 0.0 0.0 0.4958625672779118 0.0 8 0.0 0.0 0.0 0.7874253997339746 0.0 9 0.0 0.0 0.0 0.9353248523123511 0.0 10 0.0 0.0 0.0 1.1631650482851772 0.0 11 0.0 0.0 0.0 1.3225624124797122 0.0 12 0.0 0.0 0.0 1.4720352634897735 0.0 13 6.0515324295571366E-5 0.0 0.0 1.533518832974074 0.0 14 6.0515324295571366E-5 0.0 0.0 1.559903514366943 0.0 15 6.0515324295571366E-5 0.0 0.0 1.5926423048108473 0.0 16 6.0515324295571366E-5 0.0 0.0 1.6667130617486265 0.0 17 6.0515324295571366E-5 0.0 0.0 1.7461091672244162 0.0 18 6.0515324295571366E-5 0.0 0.0 1.8800295798905158 0.0 19 6.0515324295571366E-5 0.0 0.0 1.9318306974875248 0.0 20 1.815459728867141E-4 0.0 0.0 1.9988211614827223 0.0 21 1.815459728867141E-4 0.0 0.0 2.072407795826137 0.0 22 1.815459728867141E-4 0.0 0.0 2.1566451272455724 0.0 23 1.815459728867141E-4 0.0 0.0 2.249717696012161 0.0 24 1.815459728867141E-4 0.0 6.0515324295571366E-5 2.3184025890876345 0.0 25 1.815459728867141E-4 0.0 6.0515324295571366E-5 2.3795230666261618 0.0 26 1.815459728867141E-4 0.0 6.0515324295571366E-5 2.4370126247069543 0.0 27 1.815459728867141E-4 0.0 6.0515324295571366E-5 2.50170350637892 0.0 28 2.4206129718228547E-4 0.0 6.0515324295571366E-5 2.571356644643123 0.0 29 2.4206129718228547E-4 0.0 6.0515324295571366E-5 2.653899546982282 0.0 30 2.4206129718228547E-4 0.0 6.0515324295571366E-5 2.7630086766871975 0.0 31 2.4206129718228547E-4 0.0 6.0515324295571366E-5 2.8495455904298645 0.0 32 2.4206129718228547E-4 0.0 6.0515324295571366E-5 2.9291837572028365 0.0 33 2.4206129718228547E-4 0.0 6.0515324295571366E-5 3.0116056288934048 0.0 34 3.0257662147785685E-4 0.0 6.0515324295571366E-5 3.1049202589571756 0.0 35 3.0257662147785685E-4 0.0 6.0515324295571366E-5 3.223046171982131 0.0 36 3.0257662147785685E-4 0.0 6.0515324295571366E-5 3.3201127521522276 0.0 37 3.0257662147785685E-4 0.0 6.0515324295571366E-5 3.420568190482876 0.0 38 3.630919457734282E-4 0.0 6.0515324295571366E-5 3.5417803850469056 0.0 39 3.630919457734282E-4 0.0 6.0515324295571366E-5 3.748682278813464 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGAA 30 2.1660817E-6 45.000004 8 TATAGCG 140 0.0 45.000004 1 TACGTTG 30 2.1660817E-6 45.000004 1 GTCGACT 25 3.8915496E-5 45.0 34 CTATACG 40 6.8175723E-9 45.0 1 CGGTCGA 25 3.8915496E-5 45.0 31 TTCGATC 25 3.8915496E-5 45.0 25 ATCGCAC 45 3.8562575E-10 45.0 11 ATCGACG 20 7.034185E-4 45.0 1 TACGTAC 20 7.034185E-4 45.0 28 CCCGATA 20 7.034185E-4 45.0 16 CGTTTTT 5195 0.0 43.31088 1 ACTACGG 110 0.0 42.954544 2 TACGGGA 800 0.0 42.1875 4 CGTATGG 190 0.0 41.44737 2 CGACGGT 515 0.0 41.06796 28 ACGTAGG 225 0.0 41.0 2 CTATGCG 110 0.0 40.909092 1 AGGTACG 50 1.0822987E-9 40.5 1 TCGATAG 100 0.0 40.5 1 >>END_MODULE