SRR1545174_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545174_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1355666
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5338	0.393754803911878	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5222	0.38519812402169856	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	65	0.0	45.000004	1
TCGTAAG	65	0.0	45.000004	1
TATAGCG	130	0.0	45.000004	1
ACAACGC	40	6.8157533E-9	45.0	39
CTATGTC	20	7.033735E-4	45.0	10
CTAGACG	45	3.8562575E-10	45.0	1
CTATGCG	40	6.8157533E-9	45.0	1
TTAGGCG	20	7.033735E-4	45.0	33
TAATACG	20	7.033735E-4	45.0	1
TGATAGT	20	7.033735E-4	45.0	32
CACGGAT	35	1.2121382E-7	45.0	13
ACGTTAC	20	7.033735E-4	45.0	33
CGTGCAT	20	7.033735E-4	45.0	25
GACACGT	20	7.033735E-4	45.0	9
GAATCTA	75	0.0	45.0	9
ACCGAGT	45	3.8562575E-10	45.0	37
AAGCGTA	35	1.2121382E-7	45.0	23
CTAAGCG	80	0.0	45.0	1
ACGATAT	20	7.033735E-4	45.0	33
CCGTAGA	20	7.033735E-4	45.0	25