##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545174_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1355666 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.067327055484167 31.0 31.0 33.0 30.0 34.0 2 31.32503581265592 31.0 31.0 34.0 28.0 34.0 3 31.43062671779037 31.0 31.0 34.0 30.0 34.0 4 35.189931738348534 37.0 35.0 37.0 32.0 37.0 5 35.041867982231615 37.0 35.0 37.0 32.0 37.0 6 35.08763441732698 37.0 35.0 37.0 32.0 37.0 7 35.7435880224185 37.0 35.0 37.0 35.0 37.0 8 35.771805149646006 37.0 35.0 37.0 35.0 37.0 9 37.48125570752678 39.0 37.0 39.0 35.0 39.0 10 36.66231652929261 39.0 35.0 39.0 32.0 39.0 11 36.250931276582875 38.0 35.0 39.0 31.0 39.0 12 35.083116342816005 37.0 34.0 39.0 30.0 39.0 13 34.51558717265167 35.0 33.0 39.0 26.0 39.0 14 35.38065349429727 37.0 33.0 40.0 27.0 41.0 15 35.87623131361264 37.0 34.0 40.0 30.0 41.0 16 36.123484693132376 37.0 34.0 40.0 31.0 41.0 17 36.086822270382235 37.0 34.0 40.0 31.0 41.0 18 36.03623975226937 36.0 35.0 40.0 30.0 41.0 19 35.92333436111845 36.0 34.0 40.0 30.0 41.0 20 35.755796044158366 36.0 34.0 40.0 30.0 41.0 21 35.589300019326295 36.0 34.0 40.0 30.0 41.0 22 35.482919834236455 35.0 34.0 40.0 30.0 41.0 23 35.50095451239464 35.0 34.0 40.0 30.0 41.0 24 35.41667047783156 35.0 34.0 40.0 29.0 41.0 25 35.32984156864597 35.0 34.0 40.0 29.0 41.0 26 35.14131651896559 35.0 34.0 40.0 29.0 41.0 27 35.07607478538224 35.0 34.0 40.0 29.0 41.0 28 35.11041952811386 36.0 34.0 40.0 29.0 41.0 29 35.14527693399407 36.0 34.0 40.0 29.0 41.0 30 35.0742941107913 36.0 34.0 40.0 29.0 41.0 31 34.855519722409504 35.0 34.0 40.0 28.0 41.0 32 34.673746335749364 35.0 34.0 40.0 27.0 41.0 33 34.436075700061814 35.0 33.0 40.0 26.0 41.0 34 34.305657883283935 35.0 33.0 40.0 25.0 41.0 35 34.173436524925755 35.0 33.0 40.0 25.0 41.0 36 33.93383547274919 35.0 33.0 40.0 23.0 41.0 37 33.85242087652858 35.0 33.0 40.0 23.0 41.0 38 33.879156812961305 35.0 33.0 40.0 23.0 41.0 39 33.8565539004445 35.0 33.0 39.0 23.0 41.0 40 33.67969322827304 35.0 33.0 39.0 23.0 41.0 41 33.69948645167763 35.0 33.0 39.0 23.0 41.0 42 33.64635832129743 35.0 33.0 39.0 23.0 41.0 43 33.524965588869236 35.0 33.0 39.0 23.0 41.0 44 33.41344180646266 35.0 32.0 39.0 23.0 41.0 45 33.33686099673518 35.0 32.0 39.0 23.0 41.0 46 33.267711958550265 35.0 32.0 39.0 23.0 41.0 47 33.201789378799795 35.0 32.0 39.0 23.0 40.0 48 33.202150087115854 35.0 32.0 38.0 23.0 40.0 49 33.20422213140995 35.0 32.0 38.0 23.0 40.0 50 33.09464720661284 35.0 32.0 38.0 23.0 40.0 51 32.931738348531276 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 3.0 13 9.0 14 24.0 15 79.0 16 179.0 17 507.0 18 1065.0 19 2081.0 20 3455.0 21 5555.0 22 7995.0 23 11224.0 24 15467.0 25 20969.0 26 26111.0 27 30544.0 28 34025.0 29 39336.0 30 46140.0 31 56173.0 32 70160.0 33 88898.0 34 148316.0 35 213607.0 36 91844.0 37 105391.0 38 136328.0 39 200012.0 40 168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.26657598553036 24.194750034300483 30.4443719913312 13.094301988837959 2 29.843707815936966 25.084939800806396 31.88668890419912 13.184663479057527 3 27.513635364462928 26.48159649943275 32.68142743124044 13.323340704863881 4 24.74746729651699 27.88076119044071 33.14533225735543 14.226439255686874 5 23.12265705564645 33.110072835049344 30.332913859313432 13.434356249990778 6 19.4346542584973 41.783890722346065 28.19802222671366 10.583432792442975 7 87.49360093120282 4.62304136859669 6.329656419796617 1.5537012804038752 8 89.5398276566647 3.1963625258728925 5.484536751677773 1.7792730657846403 9 86.06906125845157 4.90651827219979 6.892405651539539 2.1320148178091065 10 55.66636619934408 23.271882602351905 11.609054147555518 9.452697050748487 11 49.52023581029545 19.959267253143473 18.90480398564248 11.61569295091859 12 44.86031220079282 20.878962812374137 22.2266398950774 12.034085091755639 13 20.17134013835266 45.81452953751145 21.07938090945705 12.934749414678837 14 13.462903104451982 45.88962177999596 26.243927339034833 14.403547776517225 15 11.052353603321171 22.694749296655665 51.634620916951526 14.618276183071641 16 12.686384404418197 17.80977025314495 48.877157057859385 20.62668828457747 17 13.991351852152373 18.89728000849767 28.514693147132107 38.59667499221785 18 20.776356418173798 23.312453067348446 34.416589336901566 21.494601177576186 19 29.248280918751373 24.53768111024397 25.120494281039722 21.093543689964932 20 31.31671075323863 23.611272983168423 23.954204059111905 21.117812204481044 21 20.54281806875735 29.62418471806477 28.05477160303497 21.77822561014291 22 21.179184253348538 26.483145553550802 24.18434924236501 28.153320950735655 23 17.090787848924442 32.478058754885055 24.2717601533121 26.15939324287841 24 18.095091268793347 23.900429751871037 41.773121108001526 16.23135787133409 25 15.457863515054592 26.43254311902784 37.35411229609653 20.755481069821034 26 14.118595583277887 37.844867393591045 26.2009226461385 21.835614376992563 27 15.665067944464198 36.855021812157275 28.12580679901982 19.354103444358714 28 13.205022476037609 29.311128257255103 39.865866666273256 17.61798260043403 29 13.396810128748527 25.433403212885768 38.275430673927055 22.894355984438644 30 17.983190549884707 33.220203206394494 30.35002721909379 18.44657902462701 31 29.780639183987795 28.4612876623003 23.479160796243324 18.27891235746858 32 31.91995668549628 27.265712941093163 23.59836419885134 17.21596617455922 33 28.902546792499038 28.965246602039148 22.536524483169156 19.59568212229266 34 18.470626245697687 28.87931098072829 27.136256275513286 25.51380649806073 35 19.879749141750256 26.021158603962924 30.66588673021231 23.433205524074513 36 31.2141781235201 26.215454249055448 24.670014590614503 17.900353036809953 37 19.40418952750899 35.15652085395665 27.557820289068253 17.881469329466107 38 18.92449910228626 35.31363920021599 23.89312706817166 21.868734629326102 39 20.076331485778944 33.73839869112303 26.45422987668054 19.731039946417482 40 24.78250542537764 27.76908176497751 24.19770061357296 23.250712196071895 41 15.780656887463431 25.07077702029851 27.422978816316114 31.725587275921946 42 21.1051247136094 26.059958721395976 23.252556308117192 29.582360256877433 43 21.810239395249273 27.07407281734587 24.71051129112923 26.40517649627563 44 19.105738434098075 31.096154952621074 28.376237214771187 21.421869398509664 45 15.928407144532649 41.100610327322514 20.792215781763353 22.178766746381484 46 20.845178679704294 35.24525952557636 25.251573765219458 18.65798802949989 47 19.743727437289127 29.24599421981521 26.571441638279637 24.438836704616033 48 21.754325918035857 24.877514077951353 32.00537595543445 21.362784048578337 49 20.58700299336267 24.802200542021414 32.56325673137779 22.04753973323813 50 18.783313884098295 35.183149831890745 25.111642543222295 20.92189374078866 51 16.69511516848545 35.757701380723574 23.77768565413605 23.769497796654928 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1487.0 1 1591.5 2 1696.0 3 5099.0 4 8502.0 5 6481.0 6 4460.0 7 4993.0 8 5526.0 9 6329.0 10 7132.0 11 7876.5 12 8621.0 13 8424.0 14 8227.0 15 7968.5 16 7710.0 17 7105.0 18 6500.0 19 6104.0 20 5708.0 21 5602.0 22 5496.0 23 5388.0 24 5280.0 25 5567.0 26 8813.5 27 11773.0 28 13112.0 29 14451.0 30 16794.5 31 19138.0 32 23105.0 33 27072.0 34 33192.5 35 39313.0 36 42156.0 37 44999.0 38 54477.5 39 63956.0 40 80811.0 41 97666.0 42 124362.5 43 151059.0 44 151788.0 45 152517.0 46 143803.0 47 135089.0 48 117724.5 49 100360.0 50 94933.0 51 89506.0 52 79030.0 53 68554.0 54 64361.0 55 60168.0 56 54762.0 57 49356.0 58 44941.0 59 40526.0 60 37051.5 61 33577.0 62 28423.5 63 23270.0 64 20045.5 65 16821.0 66 14478.0 67 12135.0 68 10027.0 69 7919.0 70 6491.0 71 5063.0 72 4544.5 73 4026.0 74 3279.5 75 1983.0 76 1433.0 77 1047.5 78 662.0 79 487.5 80 313.0 81 219.0 82 125.0 83 89.5 84 54.0 85 35.5 86 17.0 87 14.5 88 12.0 89 7.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1355666.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.092870517250866 #Duplication Level Percentage of deduplicated Percentage of total 1 80.56649751606592 14.576792075865944 2 8.365577314948911 3.0271461432284372 3 2.9130571249504613 1.5811669611325134 4 1.3964177245574527 1.0106082031364831 5 0.8136273956377131 0.7360427559280593 6 0.536571269091069 0.5824868696965011 7 0.3795257233996588 0.4806696840005197 8 0.29415483249108115 0.42576842370278006 9 0.22382165959006112 0.36446186753272597 >10 2.3138833671538994 9.545337820395932 >50 0.7636666702850701 9.963372264241592 >100 1.4213817212335773 55.45577287117707 >500 0.009372643230611318 1.1320438803698363 >1k 0.0016300249096715337 0.3397458773442885 >5k 8.150124548357669E-4 0.7785843022473278 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5338 0.393754803911878 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5222 0.38519812402169856 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.376448181189171E-5 0.0 0.0 0.03798870813312424 0.0 2 7.376448181189171E-5 0.0 0.0 0.1380871099518613 0.0 3 7.376448181189171E-5 0.0 0.0 0.20071315501015738 0.0 4 7.376448181189171E-5 0.0 0.0 0.29520545621119065 0.0 5 7.376448181189171E-5 0.0 0.0 0.49938554186650697 0.0 6 7.376448181189171E-5 0.0 0.0 0.7198675780022513 0.0 7 7.376448181189171E-5 0.0 0.0 0.858987390699479 0.0 8 7.376448181189171E-5 0.0 0.0 1.2252280428955216 0.0 9 7.376448181189171E-5 0.0 0.0 1.3920095362722087 0.0 10 7.376448181189171E-5 0.0 0.0 1.6816088918656955 0.0 11 7.376448181189171E-5 0.0 0.0 1.9539473587151999 0.0 12 7.376448181189171E-5 0.0 0.0 2.1823221944048163 0.0 13 7.376448181189171E-5 0.0 0.0 2.2716509818790174 0.0 14 7.376448181189171E-5 0.0 0.0 2.3096396900121414 0.0 15 7.376448181189171E-5 0.0 0.0 2.3662170475618627 0.0 16 7.376448181189171E-5 0.0 0.0 2.498771821377832 0.0 17 7.376448181189171E-5 0.0 0.0 2.6570703993461517 0.0 18 7.376448181189171E-5 0.0 0.0 2.8924528608078983 0.0 19 7.376448181189171E-5 0.0 0.0 2.992698791590259 0.0 20 7.376448181189171E-5 0.0 0.0 3.094936363381541 0.0 21 7.376448181189171E-5 0.0 0.0 3.2169428162984097 0.0 22 7.376448181189171E-5 0.0 0.0 3.3323842303340205 0.0 23 7.376448181189171E-5 0.0 0.0 3.4815360125576653 0.0 24 7.376448181189171E-5 0.0 0.0 3.59166638390282 0.0 25 7.376448181189171E-5 0.0 0.0 3.67472519042301 0.0 26 7.376448181189171E-5 0.0 0.0 3.7551284755979717 0.0 27 7.376448181189171E-5 0.0 0.0 3.839441278308964 0.0 28 7.376448181189171E-5 0.0 0.0 3.922426320347342 0.0 29 7.376448181189171E-5 0.0 0.0 4.022598486647891 0.0 30 7.376448181189171E-5 0.0 0.0 4.148293163655355 0.0 31 1.4752896362378343E-4 0.0 0.0 4.255694249173469 0.0 32 1.4752896362378343E-4 0.0 0.0 4.346940913174779 0.0 33 1.4752896362378343E-4 0.0 0.0 4.4401054537031985 0.0 34 2.2129344543567517E-4 0.0 0.0 4.55289134639358 0.0 35 2.2129344543567517E-4 0.0 0.0 4.691568572199937 0.0 36 2.2129344543567517E-4 0.0 0.0 4.800592476317913 0.0 37 2.2129344543567517E-4 0.0 0.0 4.910575318699443 0.0 38 2.2129344543567517E-4 0.0 0.0 5.021074512453658 0.0 39 2.2129344543567517E-4 0.0 0.0 5.135261930298466 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGCG 65 0.0 45.000004 1 TCGTAAG 65 0.0 45.000004 1 TATAGCG 130 0.0 45.000004 1 ACAACGC 40 6.8157533E-9 45.0 39 CTATGTC 20 7.033735E-4 45.0 10 CTAGACG 45 3.8562575E-10 45.0 1 CTATGCG 40 6.8157533E-9 45.0 1 TTAGGCG 20 7.033735E-4 45.0 33 TAATACG 20 7.033735E-4 45.0 1 TGATAGT 20 7.033735E-4 45.0 32 CACGGAT 35 1.2121382E-7 45.0 13 ACGTTAC 20 7.033735E-4 45.0 33 CGTGCAT 20 7.033735E-4 45.0 25 GACACGT 20 7.033735E-4 45.0 9 GAATCTA 75 0.0 45.0 9 ACCGAGT 45 3.8562575E-10 45.0 37 AAGCGTA 35 1.2121382E-7 45.0 23 CTAAGCG 80 0.0 45.0 1 ACGATAT 20 7.033735E-4 45.0 33 CCGTAGA 20 7.033735E-4 45.0 25 >>END_MODULE